RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 HPCAL4Q9UM19 191 aa22.35■■□□□ 1.17
GFRA3-202ENST00000378362 SHROOM3Q8TF72 1996 aa22.34■■□□□ 1.17
GFRA3-202ENST00000378362 H3BRJ5 948 aa22.34■■□□□ 1.17
GFRA3-202ENST00000378362 KDELR3O43731 214 aa22.34■■□□□ 1.17
GFRA3-202ENST00000378362 RNASEH1O60930 286 aaKnown RBP22.34■■□□□ 1.17
GFRA3-202ENST00000378362 NDUFS2O75306 463 aa22.34■■□□□ 1.17
GFRA3-202ENST00000378362 RNASEH2AO75792 299 aaKnown RBP22.34■■□□□ 1.17
GFRA3-202ENST00000378362 SERINC3Q13530 473 aa22.34■■□□□ 1.17
GFRA3-202ENST00000378362 ELAVL3Q14576 367 aaKnown RBP22.34■■□□□ 1.17
GFRA3-202ENST00000378362 LLGL1Q15334 1064 aa22.34■■□□□ 1.17
GFRA3-202ENST00000378362 LPCAT2Q7L5N7 544 aa22.34■■□□□ 1.17
GFRA3-202ENST00000378362 TEKT4Q8WW24 435 aa22.34■■□□□ 1.17
GFRA3-202ENST00000378362 RAPGEF5Q92565 580 aa22.34■■□□□ 1.17
GFRA3-202ENST00000378362 PIGKQ92643 395 aa22.34■■□□□ 1.17
GFRA3-202ENST00000378362 NEUROG2Q9H2A3 272 aa22.34■■□□□ 1.17
GFRA3-202ENST00000378362 CNOT1A5YKK6 2376 aaKnown RBP22.34■■□□□ 1.17
GFRA3-202ENST00000378362 PATE3B3GLJ2 98 aa22.34■■□□□ 1.17
GFRA3-202ENST00000378362 BUB1BO60566 1050 aaPredicted RBP22.34■■□□□ 1.17
GFRA3-202ENST00000378362 RHOBTB1O94844 696 aa22.34■■□□□ 1.17
GFRA3-202ENST00000378362 RETP07949 1114 aa22.34■■□□□ 1.17
GFRA3-202ENST00000378362 COMTP21964 271 aa22.34■■□□□ 1.17
GFRA3-202ENST00000378362 DPYSL3Q14195 570 aa22.34■■□□□ 1.17
GFRA3-202ENST00000378362 FAM182AQ5T1J6 154 aa22.34■■□□□ 1.17
GFRA3-202ENST00000378362 ATXN7L2Q5T6C5 722 aaPredicted RBP22.34■■□□□ 1.17
GFRA3-202ENST00000378362 EXOC2Q96KP1 924 aa22.34■■□□□ 1.17
GFRA3-202ENST00000378362 HSPA12BQ96MM6 686 aa22.34■■□□□ 1.17
GFRA3-202ENST00000378362 PABPC3Q9H361 631 aaKnown RBP22.34■■□□□ 1.17
GFRA3-202ENST00000378362 MTA2O94776 668 aa22.33■■□□□ 1.16
GFRA3-202ENST00000378362 TGM1P22735 817 aa22.33■■□□□ 1.16
GFRA3-202ENST00000378362 ARSEP51690 589 aa22.33■■□□□ 1.16
GFRA3-202ENST00000378362 BYSLQ13895 437 aaKnown RBP22.33■■□□□ 1.16
GFRA3-202ENST00000378362 SF3A2Q15428 464 aaKnown RBP22.33■■□□□ 1.16
GFRA3-202ENST00000378362 METTL3Q86U44 580 aaKnown RBP22.33■■□□□ 1.16
GFRA3-202ENST00000378362 RYBPQ8N488 228 aaPredicted RBP22.33■■□□□ 1.16
GFRA3-202ENST00000378362 HDDC3Q8N4P3 179 aa22.33■■□□□ 1.16
GFRA3-202ENST00000378362 OR8D1Q8WZ84 308 aa22.33■■□□□ 1.16
GFRA3-202ENST00000378362 TSC1Q92574 1164 aa22.33■■□□□ 1.16
GFRA3-202ENST00000378362 OMDQ99983 421 aa22.33■■□□□ 1.16
GFRA3-202ENST00000378362 C6orf106Q9H6K1 298 aaPredicted RBP22.33■■□□□ 1.16
GFRA3-202ENST00000378362 TRIM10Q9UDY6 481 aa22.33■■□□□ 1.16
GFRA3-202ENST00000378362 MCF2LO15068 1137 aa22.32■■□□□ 1.16
GFRA3-202ENST00000378362 ETFBP38117 255 aa22.32■■□□□ 1.16
GFRA3-202ENST00000378362 ZNF33AQ06730 810 aa22.32■■□□□ 1.16
GFRA3-202ENST00000378362 PARP15Q460N3 678 aa22.32■■□□□ 1.16
GFRA3-202ENST00000378362 ARSIQ5FYB1 569 aa22.32■■□□□ 1.16
GFRA3-202ENST00000378362 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.32■■□□□ 1.16
GFRA3-202ENST00000378362 PIP4K2CQ8TBX8 421 aa22.32■■□□□ 1.16
GFRA3-202ENST00000378362 GRPEL1Q9HAV7 217 aa22.32■■□□□ 1.16
GFRA3-202ENST00000378362 PPM1HQ9ULR3 514 aa22.32■■□□□ 1.16
GFRA3-202ENST00000378362 SLCO1B1Q9Y6L6 691 aa22.32■■□□□ 1.16
GFRA3-202ENST00000378362 TMCC1O94876 653 aa22.31■■□□□ 1.16
GFRA3-202ENST00000378362 CHRNA3P32297 505 aa22.31■■□□□ 1.16
GFRA3-202ENST00000378362 HTR7P34969 479 aa22.31■■□□□ 1.16
GFRA3-202ENST00000378362 HCAR3P49019 387 aa22.31■■□□□ 1.16
GFRA3-202ENST00000378362 VASPP50552 380 aaPredicted RBP22.31■■□□□ 1.16
GFRA3-202ENST00000378362 YBEYP58557 167 aaPredicted RBP22.31■■□□□ 1.16
GFRA3-202ENST00000378362 PCDH19Q8TAB3 1148 aa22.31■■□□□ 1.16
GFRA3-202ENST00000378362 RETREG1Q9H6L5 497 aa22.31■■□□□ 1.16
GFRA3-202ENST00000378362 FSCN3Q9NQT6 498 aa22.31■■□□□ 1.16
GFRA3-202ENST00000378362 RXFP3Q9NSD7 469 aa22.31■■□□□ 1.16
GFRA3-202ENST00000378362 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.31■■□□□ 1.16
GFRA3-202ENST00000378362 KPNA3O00505 521 aaPredicted RBP22.31■■□□□ 1.16
GFRA3-202ENST00000378362 EPN2O95208 641 aa22.31■■□□□ 1.16
GFRA3-202ENST00000378362 MAN1A1P33908 653 aa22.31■■□□□ 1.16
GFRA3-202ENST00000378362 DRD3P35462 400 aa22.31■■□□□ 1.16
GFRA3-202ENST00000378362 MPLP40238 635 aa22.31■■□□□ 1.16
GFRA3-202ENST00000378362 ARHGAP25P42331 645 aa22.31■■□□□ 1.16
GFRA3-202ENST00000378362 NDST2P52849 883 aa22.31■■□□□ 1.16
GFRA3-202ENST00000378362 TTC31Q49AM3 519 aaPredicted RBP22.31■■□□□ 1.16
GFRA3-202ENST00000378362 TMCO3Q6UWJ1 677 aa22.31■■□□□ 1.16
GFRA3-202ENST00000378362 ZDHHC6Q9H6R6 413 aa22.31■■□□□ 1.16
GFRA3-202ENST00000378362 FBRSQ9HAH7 460 aa22.31■■□□□ 1.16
GFRA3-202ENST00000378362 ALG6Q9Y672 507 aa22.31■■□□□ 1.16
GFRA3-202ENST00000378362 CACNA1EQ15878 2313 aa22.3■■□□□ 1.16
GFRA3-202ENST00000378362 LRRD1A4D1F6 860 aa22.3■■□□□ 1.16
GFRA3-202ENST00000378362 SPOPO43791 374 aa22.3■■□□□ 1.16
GFRA3-202ENST00000378362 LEFTY1O75610 366 aa22.3■■□□□ 1.16
GFRA3-202ENST00000378362 CCNHP51946 323 aaPredicted RBP22.3■■□□□ 1.16
GFRA3-202ENST00000378362 NAP1L1P55209 391 aaKnown RBP22.3■■□□□ 1.16
GFRA3-202ENST00000378362 SLC20A2Q08357 652 aa22.3■■□□□ 1.16
GFRA3-202ENST00000378362 CNTN1Q12860 1018 aa22.3■■□□□ 1.16
GFRA3-202ENST00000378362 ANKRD20A8PQ5CZ79 823 aa22.3■■□□□ 1.16
GFRA3-202ENST00000378362 LYSMD4Q5XG99 296 aa22.3■■□□□ 1.16
GFRA3-202ENST00000378362 AFMIDQ63HM1 303 aa22.3■■□□□ 1.16
GFRA3-202ENST00000378362 SLC36A4Q6YBV0 504 aa22.3■■□□□ 1.16
GFRA3-202ENST00000378362 CYP2U1Q7Z449 544 aa22.3■■□□□ 1.16
GFRA3-202ENST00000378362 RGL4Q8IZJ4 473 aa22.3■■□□□ 1.16
GFRA3-202ENST00000378362 SNX19Q92543 992 aa22.3■■□□□ 1.16
GFRA3-202ENST00000378362 RNF25Q96BH1 459 aaPredicted RBP22.3■■□□□ 1.16
GFRA3-202ENST00000378362 BTBD1Q9H0C5 482 aa22.3■■□□□ 1.16
GFRA3-202ENST00000378362 SEMA4GQ9NTN9 838 aa22.3■■□□□ 1.16
GFRA3-202ENST00000378362 WASF2Q9Y6W5 498 aa22.3■■□□□ 1.16
GFRA3-202ENST00000378362 BCLAF3A2AJT9 711 aaKnown RBP22.29■■□□□ 1.16
GFRA3-202ENST00000378362 ARHGAP42A6NI28 874 aa22.29■■□□□ 1.16
GFRA3-202ENST00000378362 GJB3O75712 270 aa22.29■■□□□ 1.16
GFRA3-202ENST00000378362 IPO7O95373 1038 aaKnown RBP22.29■■□□□ 1.16
GFRA3-202ENST00000378362 KRT7P08729 469 aa22.29■■□□□ 1.16
GFRA3-202ENST00000378362 RECQLP46063 649 aaPredicted RBP22.29■■□□□ 1.16
GFRA3-202ENST00000378362 MARCKSL1P49006 195 aa22.29■■□□□ 1.16
GFRA3-202ENST00000378362 CLCN6P51797 869 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms