RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 E5RJQ4 531 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 ELFN1P0C7U0 828 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 BUD31P41223 144 aaPredicted RBP14.28□□□□□ -0.12
TRIM13-202ENST00000378182 TMED10P49755 219 aaKnown RBP14.28□□□□□ -0.12
TRIM13-202ENST00000378182 MAXP61244 160 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 BNC1Q01954 994 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 SPANXN3Q5MJ09 141 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.28□□□□□ -0.12
TRIM13-202ENST00000378182 ZMYND8Q9ULU4 1186 aaPredicted RBP14.28□□□□□ -0.12
TRIM13-202ENST00000378182 SLC25A14O95258 325 aaPredicted RBP14.28□□□□□ -0.12
TRIM13-202ENST00000378182 AXLP30530 894 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 KCNMA1Q12791 1236 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 SCIMPQ6UWF3 145 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 MTDHQ86UE4 582 aaKnown RBP14.28□□□□□ -0.12
TRIM13-202ENST00000378182 FAM126BQ8IXS8 530 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 C3orf20Q8ND61 904 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 TP53INP1Q96A56 240 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 C2orf49Q9BVC5 232 aaPredicted RBP14.28□□□□□ -0.12
TRIM13-202ENST00000378182 SEMA6AQ9H2E6 1030 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 ALG9Q9H6U8 611 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 FBXO6Q9NRD1 293 aaPredicted RBP14.28□□□□□ -0.12
TRIM13-202ENST00000378182 A0A1W2PQJ5 194 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 SNPHO15079 494 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 NCAM2O15394 837 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 KCNH1O95259 989 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 DGKAP23743 735 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 HK2P52789 917 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 FAM151BQ6UXP7 276 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 ZNF410Q86VK4 478 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 ISCUQ9H1K1 167 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 URADA6NGE7 173 aa14.27□□□□□ -0.12
TRIM13-202ENST00000378182 SMAPO00193 183 aa14.27□□□□□ -0.12
TRIM13-202ENST00000378182 CCNYL3P0C7X3 344 aa14.27□□□□□ -0.12
TRIM13-202ENST00000378182 PTPRAP18433 802 aa14.27□□□□□ -0.12
TRIM13-202ENST00000378182 SERPINH1P50454 418 aaKnown RBP14.27□□□□□ -0.12
TRIM13-202ENST00000378182 RAD9BQ6WBX8 426 aa14.27□□□□□ -0.12
TRIM13-202ENST00000378182 ZNF720Q7Z2F6 126 aa14.27□□□□□ -0.12
TRIM13-202ENST00000378182 TINF2Q9BSI4 451 aa14.27□□□□□ -0.12
TRIM13-202ENST00000378182 UMODL1Q5DID0 1318 aa14.27□□□□□ -0.12
TRIM13-202ENST00000378182 PDHA2P29803 388 aa14.27□□□□□ -0.12
TRIM13-202ENST00000378182 ZCCHC23Q6ZST2 131 aa14.27□□□□□ -0.12
TRIM13-202ENST00000378182 NETO2Q8NC67 525 aa14.27□□□□□ -0.12
TRIM13-202ENST00000378182 MYLPFQ96A32 169 aa14.27□□□□□ -0.12
TRIM13-202ENST00000378182 WRAP53Q9BUR4 548 aaKnown RBP14.27□□□□□ -0.12
TRIM13-202ENST00000378182 POPDC2Q9HBU9 364 aa14.27□□□□□ -0.12
TRIM13-202ENST00000378182 UNC13BO14795 1591 aa14.27□□□□□ -0.12
TRIM13-202ENST00000378182 SGTAO43765 313 aa14.27□□□□□ -0.12
TRIM13-202ENST00000378182 GLUD1P00367 558 aa14.27□□□□□ -0.12
TRIM13-202ENST00000378182 SLC35G4P0C7Q5 338 aa14.27□□□□□ -0.12
TRIM13-202ENST00000378182 FBXO30Q8TB52 745 aa14.27□□□□□ -0.12
TRIM13-202ENST00000378182 PDCD10Q9BUL8 212 aa14.27□□□□□ -0.12
TRIM13-202ENST00000378182 GTPBP2Q9BX10 602 aaKnown RBP14.27□□□□□ -0.12
TRIM13-202ENST00000378182 INTS7Q9NVH2 962 aaKnown RBP14.27□□□□□ -0.12
TRIM13-202ENST00000378182 EFR3BQ9Y2G0 817 aa14.27□□□□□ -0.12
TRIM13-202ENST00000378182 MSCO60682 206 aa14.27□□□□□ -0.13
TRIM13-202ENST00000378182 NEDD8Q15843 81 aa14.27□□□□□ -0.13
TRIM13-202ENST00000378182 CCNI2Q6ZMN8 369 aaPredicted RBP14.27□□□□□ -0.13
TRIM13-202ENST00000378182 KRT73Q86Y46 540 aa14.27□□□□□ -0.13
TRIM13-202ENST00000378182 DEFB107AQ8IZN7 70 aa14.27□□□□□ -0.13
TRIM13-202ENST00000378182 FRMD8P1Q9BZ68 369 aaPredicted RBP14.27□□□□□ -0.13
TRIM13-202ENST00000378182 BHLHE41Q9C0J9 482 aaPredicted RBP14.27□□□□□ -0.13
TRIM13-202ENST00000378182 ASF1AQ9Y294 204 aa14.27□□□□□ -0.13
TRIM13-202ENST00000378182 GJB1P08034 283 aa14.27□□□□□ -0.13
TRIM13-202ENST00000378182 MYBL2P10244 700 aa14.27□□□□□ -0.13
TRIM13-202ENST00000378182 H2AFXP16104 143 aaPredicted RBP14.27□□□□□ -0.13
TRIM13-202ENST00000378182 MAT2AP31153 395 aaKnown RBP14.27□□□□□ -0.13
TRIM13-202ENST00000378182 PMF1Q6P1K2 205 aa14.27□□□□□ -0.13
TRIM13-202ENST00000378182 REXO1L1PQ8IX06 675 aa14.27□□□□□ -0.13
TRIM13-202ENST00000378182 GPR135Q8IZ08 494 aa14.27□□□□□ -0.13
TRIM13-202ENST00000378182 BRINP2Q9C0B6 783 aa14.27□□□□□ -0.13
TRIM13-202ENST00000378182 PCDHGA3Q9Y5H0 932 aa14.27□□□□□ -0.13
TRIM13-202ENST00000378182 PSMD9O00233 223 aa14.27□□□□□ -0.13
TRIM13-202ENST00000378182 TOP3BO95985 862 aaKnown RBP14.27□□□□□ -0.13
TRIM13-202ENST00000378182 FAM228BP0C875 321 aa14.27□□□□□ -0.13
TRIM13-202ENST00000378182 TAF8Q7Z7C8 310 aa14.27□□□□□ -0.13
TRIM13-202ENST00000378182 PRSS58Q8IYP2 241 aa14.27□□□□□ -0.13
TRIM13-202ENST00000378182 LRRC34Q8IZ02 419 aa14.27□□□□□ -0.13
TRIM13-202ENST00000378182 DEFB119Q8N690 84 aa14.27□□□□□ -0.13
TRIM13-202ENST00000378182 OGDHLQ9ULD0 1010 aa14.27□□□□□ -0.13
TRIM13-202ENST00000378182 PIK3CGP48736 1102 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 OASLQ15646 514 aaKnown RBP14.26□□□□□ -0.13
TRIM13-202ENST00000378182 ZNF605Q86T29 641 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 KIAA0319LQ8IZA0 1049 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 FAM98AQ8NCA5 519 aaKnown RBP14.26□□□□□ -0.13
TRIM13-202ENST00000378182 MCCC2Q9HCC0 563 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 TMEM88BA6NKF7 163 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 CRABP2P29373 138 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 MAPK7Q13164 816 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 TERF2Q15554 542 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 PSMD5Q16401 504 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 C15orf59Q2T9L4 293 aaPredicted RBP14.26□□□□□ -0.13
TRIM13-202ENST00000378182 RABL6Q3YEC7 729 aaPredicted RBP14.26□□□□□ -0.13
TRIM13-202ENST00000378182 ZBTB49Q6ZSB9 765 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 PARP8Q8N3A8 854 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 VAV3Q9UKW4 847 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 DCLK1O15075 740 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 SCGNO76038 276 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 TGFB3P10600 412 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 ALOX12P18054 663 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 ERVK-21P61565 698 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms