RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 PCDHB7Q9Y5E2 793 aa20.55■□□□□ 0.88
VSX1-202ENST00000376709 CPB1P15086 417 aa20.54■□□□□ 0.88
VSX1-202ENST00000376709 CPA3P15088 417 aa20.54■□□□□ 0.88
VSX1-202ENST00000376709 MAGEA11P43364 429 aa20.54■□□□□ 0.88
VSX1-202ENST00000376709 FAM126BQ8IXS8 530 aa20.54■□□□□ 0.88
VSX1-202ENST00000376709 TNS4Q8IZW8 715 aa20.54■□□□□ 0.88
VSX1-202ENST00000376709 PLD6Q8N2A8 252 aaKnown RBP20.54■□□□□ 0.88
VSX1-202ENST00000376709 FAM13CQ8NE31 585 aa20.54■□□□□ 0.88
VSX1-202ENST00000376709 FBXO32Q969P5 355 aa20.54■□□□□ 0.88
VSX1-202ENST00000376709 SIKE1Q9BRV8 207 aa20.54■□□□□ 0.88
VSX1-202ENST00000376709 UNC93B1Q9H1C4 597 aa20.54■□□□□ 0.88
VSX1-202ENST00000376709 ENTPD7Q9NQZ7 604 aa20.54■□□□□ 0.88
VSX1-202ENST00000376709 ENPP3O14638 875 aa20.53■□□□□ 0.88
VSX1-202ENST00000376709 SOAT2O75908 522 aa20.53■□□□□ 0.88
VSX1-202ENST00000376709 RALBP11234 206 aa20.53■□□□□ 0.88
VSX1-202ENST00000376709 YWHAQP27348 245 aa20.53■□□□□ 0.88
VSX1-202ENST00000376709 PSMD5Q16401 504 aa20.53■□□□□ 0.88
VSX1-202ENST00000376709 KDELC2Q7Z4H8 507 aa20.53■□□□□ 0.88
VSX1-202ENST00000376709 MIB1Q86YT6 1006 aa20.53■□□□□ 0.88
VSX1-202ENST00000376709 GPR62Q9BZJ7 368 aa20.53■□□□□ 0.88
VSX1-202ENST00000376709 FNIP2Q9P278 1114 aa20.53■□□□□ 0.88
VSX1-202ENST00000376709 SLC39A10Q9ULF5 831 aa20.53■□□□□ 0.88
VSX1-202ENST00000376709 TRIM17Q9Y577 477 aa20.53■□□□□ 0.88
VSX1-202ENST00000376709 OR6C75A6NL08 312 aa20.53■□□□□ 0.88
VSX1-202ENST00000376709 WASH4PA8MWX3 477 aa20.53■□□□□ 0.88
VSX1-202ENST00000376709 GYG2O15488 501 aa20.53■□□□□ 0.88
VSX1-202ENST00000376709 C2P06681 752 aa20.53■□□□□ 0.88
VSX1-202ENST00000376709 COL6A1P12109 1028 aa20.53■□□□□ 0.88
VSX1-202ENST00000376709 IRF9Q00978 393 aa20.53■□□□□ 0.88
VSX1-202ENST00000376709 MS4A13Q5J8X5 152 aa20.53■□□□□ 0.88
VSX1-202ENST00000376709 RAPH1Q70E73 1250 aa20.53■□□□□ 0.88
VSX1-202ENST00000376709 MIPEPQ99797 713 aa20.53■□□□□ 0.88
VSX1-202ENST00000376709 ZYG11BQ9C0D3 744 aa20.53■□□□□ 0.88
VSX1-202ENST00000376709 TLE6Q9H808 572 aa20.53■□□□□ 0.88
VSX1-202ENST00000376709 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.53■□□□□ 0.88
VSX1-202ENST00000376709 HCSTQ9UBK5 93 aa20.53■□□□□ 0.88
VSX1-202ENST00000376709 WFS1O76024 890 aa20.52■□□□□ 0.88
VSX1-202ENST00000376709 TBX18O95935 607 aa20.52■□□□□ 0.88
VSX1-202ENST00000376709 SAT1P21673 171 aa20.52■□□□□ 0.88
VSX1-202ENST00000376709 HADHAP40939 763 aa20.52■□□□□ 0.88
VSX1-202ENST00000376709 ALDH18A1P54886 795 aaKnown RBP20.52■□□□□ 0.88
VSX1-202ENST00000376709 BFSP2Q13515 415 aa20.52■□□□□ 0.88
VSX1-202ENST00000376709 ITGA9Q13797 1035 aa20.52■□□□□ 0.88
VSX1-202ENST00000376709 ARHGEF6Q15052 776 aa20.52■□□□□ 0.88
VSX1-202ENST00000376709 TCTN1Q2MV58 587 aa20.52■□□□□ 0.88
VSX1-202ENST00000376709 ACCSLQ4AC99 568 aa20.52■□□□□ 0.88
VSX1-202ENST00000376709 FAM91A1Q658Y4 838 aa20.52■□□□□ 0.88
VSX1-202ENST00000376709 DENND5AQ6IQ26 1287 aa20.52■□□□□ 0.88
VSX1-202ENST00000376709 POTEHQ6S545 545 aa20.52■□□□□ 0.88
VSX1-202ENST00000376709 SEPT5Q99719 369 aaPredicted RBP20.52■□□□□ 0.88
VSX1-202ENST00000376709 EBF4Q9BQW3 602 aa20.52■□□□□ 0.88
VSX1-202ENST00000376709 MCMBPQ9BTE3 642 aa20.52■□□□□ 0.88
VSX1-202ENST00000376709 ATXN3LQ9H3M9 355 aa20.52■□□□□ 0.88
VSX1-202ENST00000376709 SLC27A5Q9Y2P5 690 aa20.52■□□□□ 0.88
VSX1-202ENST00000376709 DOCK4Q8N1I0 1966 aa20.52■□□□□ 0.88
VSX1-202ENST00000376709 VAPBO95292 243 aa20.52■□□□□ 0.88
VSX1-202ENST00000376709 ADRA1AP35348 466 aa20.52■□□□□ 0.88
VSX1-202ENST00000376709 GRM3Q14832 879 aa20.52■□□□□ 0.88
VSX1-202ENST00000376709 PCSK7Q16549 785 aa20.52■□□□□ 0.88
VSX1-202ENST00000376709 MGAT5BQ3V5L5 792 aa20.52■□□□□ 0.88
VSX1-202ENST00000376709 CLEC14AQ86T13 490 aa20.52■□□□□ 0.88
VSX1-202ENST00000376709 ZC3HC1Q86WB0 502 aaKnown RBP20.52■□□□□ 0.88
VSX1-202ENST00000376709 ZNF354CQ86Y25 554 aa20.52■□□□□ 0.88
VSX1-202ENST00000376709 UMODL1-AS1Q8N2C9 162 aa20.52■□□□□ 0.88
VSX1-202ENST00000376709 ATP6V0D2Q8N8Y2 350 aa20.52■□□□□ 0.88
VSX1-202ENST00000376709 ACVR1CQ8NER5 493 aa20.52■□□□□ 0.88
VSX1-202ENST00000376709 RHOJQ9H4E5 214 aa20.52■□□□□ 0.88
VSX1-202ENST00000376709 NOL6Q9H6R4 1146 aaKnown RBP20.52■□□□□ 0.88
VSX1-202ENST00000376709 TLR8Q9NR97 1041 aaKnown RBP20.52■□□□□ 0.88
VSX1-202ENST00000376709 DONSONQ9NYP3 566 aa20.52■□□□□ 0.88
VSX1-202ENST00000376709 FNDC1Q4ZHG4 1894 aaPredicted RBP20.51■□□□□ 0.87
VSX1-202ENST00000376709 MYLKQ15746 1914 aa20.51■□□□□ 0.87
VSX1-202ENST00000376709 RTN3O95197 1032 aaPredicted RBP20.51■□□□□ 0.87
VSX1-202ENST00000376709 ALDH2P05091 517 aa20.51■□□□□ 0.87
VSX1-202ENST00000376709 ATP5BP06576 529 aaKnown RBP20.51■□□□□ 0.87
VSX1-202ENST00000376709 RHOQP17081 205 aa20.51■□□□□ 0.87
VSX1-202ENST00000376709 NDST2P52849 883 aa20.51■□□□□ 0.87
VSX1-202ENST00000376709 MRPL58Q14197 206 aaKnown RBP20.51■□□□□ 0.87
VSX1-202ENST00000376709 UGP2Q16851 508 aa20.51■□□□□ 0.87
VSX1-202ENST00000376709 C10orf120Q5SQS8 335 aa20.51■□□□□ 0.87
VSX1-202ENST00000376709 SREK1Q8WXA9 508 aaKnown RBP20.51■□□□□ 0.87
VSX1-202ENST00000376709 BTN2A3PQ96KV6 586 aa20.51■□□□□ 0.87
VSX1-202ENST00000376709 MRGPRX2Q96LB1 330 aa20.51■□□□□ 0.87
VSX1-202ENST00000376709 CASD1Q96PB1 797 aa20.51■□□□□ 0.87
VSX1-202ENST00000376709 GPR22Q99680 433 aa20.51■□□□□ 0.87
VSX1-202ENST00000376709 CADM1Q9BY67 442 aaKnown RBP20.51■□□□□ 0.87
VSX1-202ENST00000376709 ELAC1Q9H777 363 aaKnown RBP20.51■□□□□ 0.87
VSX1-202ENST00000376709 NMRAL1Q9HBL8 299 aa20.51■□□□□ 0.87
VSX1-202ENST00000376709 PRDM5Q9NQX1 630 aaPredicted RBP20.51■□□□□ 0.87
VSX1-202ENST00000376709 TLK1Q9UKI8 766 aa20.51■□□□□ 0.87
VSX1-202ENST00000376709 LRFN2Q9ULH4 789 aa20.51■□□□□ 0.87
VSX1-202ENST00000376709 TCAF1Q9Y4C2 921 aa20.51■□□□□ 0.87
VSX1-202ENST00000376709 ENO1P06733 434 aaKnown RBP20.51■□□□□ 0.87
VSX1-202ENST00000376709 RENBPP51606 427 aa20.51■□□□□ 0.87
VSX1-202ENST00000376709 PRMT2P55345 433 aa20.51■□□□□ 0.87
VSX1-202ENST00000376709 ABCE1P61221 599 aaKnown RBP20.51■□□□□ 0.87
VSX1-202ENST00000376709 ITKQ08881 620 aa20.51■□□□□ 0.87
VSX1-202ENST00000376709 TAF10Q12962 218 aa20.51■□□□□ 0.87
VSX1-202ENST00000376709 SEPT6Q14141 434 aa20.51■□□□□ 0.87
VSX1-202ENST00000376709 USP10Q14694 798 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms