RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 RRM1P23921 792 aa12.49□□□□□ -0.41
LSM2-208ENST00000375661 ACP1P24666 158 aa12.49□□□□□ -0.41
LSM2-208ENST00000375661 CSKP41240 450 aa12.49□□□□□ -0.41
LSM2-208ENST00000375661 ADPRHP54922 357 aa12.49□□□□□ -0.41
LSM2-208ENST00000375661 TBX4P57082 545 aa12.49□□□□□ -0.41
LSM2-208ENST00000375661 PITX1P78337 314 aaPredicted RBP12.49□□□□□ -0.41
LSM2-208ENST00000375661 SLC18A3Q16572 532 aa12.49□□□□□ -0.41
LSM2-208ENST00000375661 PRAMEF14Q5SWL7 426 aa12.49□□□□□ -0.41
LSM2-208ENST00000375661 CCDC122Q5T0U0 273 aa12.49□□□□□ -0.41
LSM2-208ENST00000375661 FAM102AQ5T9C2 384 aaPredicted RBP12.49□□□□□ -0.41
LSM2-208ENST00000375661 TRNP1Q6NT89 227 aa12.49□□□□□ -0.41
LSM2-208ENST00000375661 PPP1R2P3Q6NXS1 205 aa12.49□□□□□ -0.41
LSM2-208ENST00000375661 ALKBH5Q6P6C2 394 aaKnown RBP12.49□□□□□ -0.41
LSM2-208ENST00000375661 TMEM139Q8IV31 216 aa12.49□□□□□ -0.41
LSM2-208ENST00000375661 JOSD2Q8TAC2 188 aa12.49□□□□□ -0.41
LSM2-208ENST00000375661 DQX1Q8TE96 717 aaKnown RBP12.49□□□□□ -0.41
LSM2-208ENST00000375661 VCPIP1Q96JH7 1222 aa12.49□□□□□ -0.41
LSM2-208ENST00000375661 SERAC1Q96JX3 654 aa12.49□□□□□ -0.41
LSM2-208ENST00000375661 CCDC42Q96M95 316 aa12.49□□□□□ -0.41
LSM2-208ENST00000375661 MTG2Q9H4K7 406 aa12.49□□□□□ -0.41
LSM2-208ENST00000375661 STIM2Q9P246 746 aa12.49□□□□□ -0.41
LSM2-208ENST00000375661 HELZ2Q9BYK8 2649 aaKnown RBP12.49□□□□□ -0.41
LSM2-208ENST00000375661 DOCK9Q9BZ29 2069 aa12.49□□□□□ -0.41
LSM2-208ENST00000375661 BPTFQ12830 3046 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 GOLGA6L7A0A1B0GV03 622 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 SIGLEC16A6NMB1 481 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 SLC7A4O43246 635 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 AKR1B10O60218 316 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 LUC7L3O95232 432 aaKnown RBP12.48□□□□□ -0.41
LSM2-208ENST00000375661 PLA2G2AP14555 144 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 FLT3P36888 993 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 RNASE9P60153 205 aaKnown RBP12.48□□□□□ -0.41
LSM2-208ENST00000375661 E2F1Q01094 437 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 EIF4EBP2Q13542 120 aaPredicted RBP12.48□□□□□ -0.41
LSM2-208ENST00000375661 CDH18Q13634 790 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 ELAVL3Q14576 367 aaKnown RBP12.48□□□□□ -0.41
LSM2-208ENST00000375661 TBC1D25Q3MII6 688 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 PITRM1Q5JRX3 1037 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 PPP1R15BQ5SWA1 713 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 OTUD1Q5VV17 481 aaPredicted RBP12.48□□□□□ -0.41
LSM2-208ENST00000375661 NADSYN1Q6IA69 706 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 NAPEPLDQ6IQ20 393 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 PLEKHA7Q6IQ23 1121 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 ARCQ7LC44 396 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 KANSL1Q7Z3B3 1105 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 ZNF605Q86T29 641 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 PRPF39Q86UA1 669 aaKnown RBP12.48□□□□□ -0.41
LSM2-208ENST00000375661 TAC4Q86UU9 113 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 EMC1Q8N766 993 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 DCBLD1Q8N8Z6 715 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 C3orf20Q8ND61 904 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 FAM131CQ96AQ9 280 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 PRICKLE1Q96MT3 831 aaPredicted RBP12.48□□□□□ -0.41
LSM2-208ENST00000375661 SERPINB11Q96P15 392 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 FAM129BQ96TA1 746 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 TRIM62Q9BVG3 475 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 DEF6Q9H4E7 631 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 METTL5Q9NRN9 209 aaKnown RBP12.48□□□□□ -0.41
LSM2-208ENST00000375661 SPTLC3Q9NUV7 552 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 CLCA2Q9UQC9 943 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 DMTF1Q9Y222 760 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 TLR6Q9Y2C9 796 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 RAI2Q9Y5P3 530 aa12.48□□□□□ -0.41
LSM2-208ENST00000375661 TTC34A8MYJ7 566 aa12.47□□□□□ -0.41
LSM2-208ENST00000375661 WNT9AO14904 365 aa12.47□□□□□ -0.41
LSM2-208ENST00000375661 ATMINO43313 823 aaPredicted RBP12.47□□□□□ -0.41
LSM2-208ENST00000375661 BRINP1O60477 761 aa12.47□□□□□ -0.41
LSM2-208ENST00000375661 ZIC2O95409 532 aaPredicted RBP12.47□□□□□ -0.41
LSM2-208ENST00000375661 TRUB2O95900 331 aaKnown RBP12.47□□□□□ -0.41
LSM2-208ENST00000375661 IGLV3-25P01717 112 aa12.47□□□□□ -0.41
LSM2-208ENST00000375661 TFE3P19532 575 aaPredicted RBP12.47□□□□□ -0.41
LSM2-208ENST00000375661 GLDCP23378 1020 aa12.47□□□□□ -0.41
LSM2-208ENST00000375661 NOS2P35228 1153 aa12.47□□□□□ -0.41
LSM2-208ENST00000375661 NNMTP40261 264 aa12.47□□□□□ -0.41
LSM2-208ENST00000375661 CLDN6P56747 220 aa12.47□□□□□ -0.41
LSM2-208ENST00000375661 RPS24P62847 133 aaKnown RBP12.47□□□□□ -0.41
LSM2-208ENST00000375661 ECT2LQ008S8 904 aa12.47□□□□□ -0.41
LSM2-208ENST00000375661 BNIP3Q12983 259 aa12.47□□□□□ -0.41
LSM2-208ENST00000375661 MAMLD1Q13495 774 aa12.47□□□□□ -0.41
LSM2-208ENST00000375661 SLC12A1Q13621 1099 aa12.47□□□□□ -0.41
LSM2-208ENST00000375661 DCAF6Q58WW2 860 aa12.47□□□□□ -0.41
LSM2-208ENST00000375661 MS4A13Q5J8X5 152 aa12.47□□□□□ -0.41
LSM2-208ENST00000375661 RNF219Q5W0B1 726 aaPredicted RBP12.47□□□□□ -0.41
LSM2-208ENST00000375661 DNAJC24Q6P3W2 148 aa12.47□□□□□ -0.41
LSM2-208ENST00000375661 RAD9BQ6WBX8 426 aa12.47□□□□□ -0.41
LSM2-208ENST00000375661 TMTC1Q8IUR5 882 aa12.47□□□□□ -0.41
LSM2-208ENST00000375661 ZNF843Q8N446 348 aa12.47□□□□□ -0.41
LSM2-208ENST00000375661 CARNMT1Q8N4J0 409 aa12.47□□□□□ -0.41
LSM2-208ENST00000375661 AADATQ8N5Z0 425 aa12.47□□□□□ -0.41
LSM2-208ENST00000375661 OR14C36Q8NHC7 312 aa12.47□□□□□ -0.41
LSM2-208ENST00000375661 RXFP2Q8WXD0 754 aa12.47□□□□□ -0.41
LSM2-208ENST00000375661 PTPRN2Q92932 1015 aa12.47□□□□□ -0.41
LSM2-208ENST00000375661 NT5C3BQ969T7 300 aa12.47□□□□□ -0.41
LSM2-208ENST00000375661 WBP1Q96G27 269 aa12.47□□□□□ -0.41
LSM2-208ENST00000375661 FCRL2Q96LA5 508 aaPredicted RBP12.47□□□□□ -0.41
LSM2-208ENST00000375661 NPY6RQ99463 290 aa12.47□□□□□ -0.41
LSM2-208ENST00000375661 PACSIN1Q9BY11 444 aa12.47□□□□□ -0.41
LSM2-208ENST00000375661 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.47□□□□□ -0.41
LSM2-208ENST00000375661 CNOT8Q9UFF9 292 aaKnown RBP12.47□□□□□ -0.41
LSM2-208ENST00000375661 TBC1D3DA0A087WVF3 549 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms