RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 CALML6Q8TD86 181 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 DNAJC9Q8WXX5 260 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 JADE3Q92613 823 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 GPR22Q99680 433 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 VCX3BQ9H321 246 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 SMOC2Q9H3U7 446 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 IARS2Q9NSE4 1012 aaKnown RBP12.43□□□□□ -0.42
UBR4-203ENST00000375225 TMEM216Q9P0N5 145 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 NKX1-2Q9UD57 310 aaPredicted RBP12.43□□□□□ -0.42
UBR4-203ENST00000375225 VTI1BQ9UEU0 232 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 IPO11Q9UI26 975 aaKnown RBP12.43□□□□□ -0.42
UBR4-203ENST00000375225 PCDHB8Q9UN66 801 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 NR2E3Q9Y5X4 410 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 PSAT1Q9Y617 370 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 PCNTO95613 3336 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 H0Y3Z8 333 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 SLC22A2O15244 555 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 INPPL1O15357 1258 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 MAP3K7O43318 606 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 NBNO60934 754 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 ENTPD5O75356 428 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 IGLV3-25P01717 112 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 HSPA1AP0DMV8 641 aaKnown RBP12.42□□□□□ -0.42
UBR4-203ENST00000375225 HSPA1BP0DMV9 641 aaKnown RBP12.42□□□□□ -0.42
UBR4-203ENST00000375225 CD68P34810 354 aaPredicted RBP12.42□□□□□ -0.42
UBR4-203ENST00000375225 SERPINB5P36952 375 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 MNX1P50219 401 aaPredicted RBP12.42□□□□□ -0.42
UBR4-203ENST00000375225 MRPS35P82673 323 aaKnown RBP12.42□□□□□ -0.42
UBR4-203ENST00000375225 KDSRQ06136 332 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 ZBTB17Q13105 803 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 LAMB3Q13751 1172 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 THOC5Q13769 683 aaKnown RBP12.42□□□□□ -0.42
UBR4-203ENST00000375225 ITGA9Q13797 1035 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 HSP90AA5PQ58FG0 334 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 AAGABQ6PD74 315 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 TTC7BQ86TV6 843 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 UNC5BQ8IZJ1 945 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 NPWQ8N729 165 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 RBM15BQ8NDT2 890 aaKnown RBP12.42□□□□□ -0.42
UBR4-203ENST00000375225 TTC8Q8TAM2 541 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 KCNV2Q8TDN2 545 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 RSPH1Q8WYR4 309 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 VPS39Q96JC1 886 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 SUSD3Q96L08 255 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 FCRL3Q96P31 734 aaPredicted RBP12.42□□□□□ -0.42
UBR4-203ENST00000375225 MLPHQ9BV36 600 aaPredicted RBP12.42□□□□□ -0.42
UBR4-203ENST00000375225 TMEM106CQ9BVX2 250 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 FSD1LQ9BXM9 530 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 ILKAPQ9H0C8 392 aaPredicted RBP12.42□□□□□ -0.42
UBR4-203ENST00000375225 CDH19Q9H159 772 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 FBXO44Q9H4M3 255 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 C11orf49Q9H6J7 331 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 GLOD4Q9HC38 313 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 PIH1D1Q9NWS0 290 aaKnown RBP12.42□□□□□ -0.42
UBR4-203ENST00000375225 MIOSQ9NXC5 875 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 BCAP29Q9UHQ4 241 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 INPP5FQ9Y2H2 1132 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 PATJQ8NI35 1801 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 COL4A4P53420 1690 aaPredicted RBP12.42□□□□□ -0.42
UBR4-203ENST00000375225 A0A087X1B8 175 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 C2orf71A6NGG8 1288 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 PRR5-ARHGAP8B1AHC4 643 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 DDHD2O94830 711 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 GSRP00390 522 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 C2P06681 752 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 ADSLP30566 484 aaPredicted RBP12.42□□□□□ -0.42
UBR4-203ENST00000375225 GRIK1P39086 918 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 IDH3AP50213 366 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 SLC12A2P55011 1212 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 FAM189BP81408 668 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 ARHGAP8P85298 464 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 TLE2Q04725 743 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 YWHAHQ04917 246 aaPredicted RBP12.42□□□□□ -0.42
UBR4-203ENST00000375225 USP10Q14694 798 aaKnown RBP12.42□□□□□ -0.42
UBR4-203ENST00000375225 KHDC1Q4VXA5 237 aaKnown RBP12.42□□□□□ -0.42
UBR4-203ENST00000375225 CERCAMQ5T4B2 595 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 LIPMQ5VYY2 423 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 CES3Q6UWW8 571 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 ZYG11AQ6WRX3 759 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 ACAD11Q709F0 780 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 BHLHA9Q7RTU4 235 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 CLEC14AQ86T13 490 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 ULK2Q8IYT8 1036 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 FATE1Q969F0 183 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 SCYL1Q96KG9 808 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 ZNF570Q96NI8 536 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 IL12RB2Q99665 862 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 THTPAQ9BU02 230 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 VCXQ9H320 206 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 ELAC1Q9H777 363 aaKnown RBP12.42□□□□□ -0.42
UBR4-203ENST00000375225 TMEM161AQ9NX61 479 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 NDE1Q9NXR1 346 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 LRFN2Q9ULH4 789 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 ATP11BQ9Y2G3 1177 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 RAP2CQ9Y3L5 183 aa12.42□□□□□ -0.42
UBR4-203ENST00000375225 ZNF638Q14966 1978 aaKnown RBP12.41□□□□□ -0.42
UBR4-203ENST00000375225 CENPFP49454 3210 aa12.41□□□□□ -0.42
UBR4-203ENST00000375225 SCN5AQ14524 2016 aa12.41□□□□□ -0.42
UBR4-203ENST00000375225 WASH4PA8MWX3 477 aa12.41□□□□□ -0.42
UBR4-203ENST00000375225 HOXA2O43364 376 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms