RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 DENND1AQ8TEH3 1009 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 PYDC1Q8WXC3 89 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 HDAC10Q969S8 669 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 ESAMQ96AP7 390 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 ZBED2Q9BTP6 218 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 FAM96AQ9H5X1 160 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 XPR1Q9UBH6 696 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 DPYSL4O14531 572 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 GJB3O75712 270 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 ATP5HO75947 161 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 ANXA9O76027 345 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 USP1O94782 785 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 FYNP06241 537 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 ALADP13716 330 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 MPSTP25325 297 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 PTPN7P35236 360 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 USP46P62068 366 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 GRIK3Q13003 919 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 EMC10Q5UCC4 262 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 LRRC8BQ6P9F7 803 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 RINLQ6ZS11 566 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 TPGS1Q6ZTW0 290 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 TDRPQ86YL5 185 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 DEFB107AQ8IZN7 70 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 CARNMT1Q8N4J0 409 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 PIWIL2Q8TC59 973 aaKnown RBP13.4□□□□□ -0.26
NCDN-203ENST00000373253 DCDC2Q9UHG0 476 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 V9GYQ6 96 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 FAM95CA0A1B0GW59 222 aa13.4□□□□□ -0.27
NCDN-203ENST00000373253 ARHGEF37A1IGU5 675 aa13.4□□□□□ -0.27
NCDN-203ENST00000373253 HACD1B0YJ81 288 aa13.4□□□□□ -0.27
NCDN-203ENST00000373253 E9PAM4 449 aa13.4□□□□□ -0.27
NCDN-203ENST00000373253 ALDOAP04075 364 aaKnown RBP13.4□□□□□ -0.27
NCDN-203ENST00000373253 SERPINB8P50452 374 aa13.4□□□□□ -0.27
NCDN-203ENST00000373253 RPS24P62847 133 aaKnown RBP13.4□□□□□ -0.27
NCDN-203ENST00000373253 FAM219BQ5XKK7 198 aa13.4□□□□□ -0.27
NCDN-203ENST00000373253 NEPROQ6NW34 567 aa13.4□□□□□ -0.27
NCDN-203ENST00000373253 NUP93Q8N1F7 819 aa13.4□□□□□ -0.27
NCDN-203ENST00000373253 PPWD1Q96BP3 646 aaKnown RBP13.4□□□□□ -0.27
NCDN-203ENST00000373253 NXNL1Q96CM4 212 aa13.4□□□□□ -0.27
NCDN-203ENST00000373253 HMCESQ96FZ2 354 aa13.4□□□□□ -0.27
NCDN-203ENST00000373253 GPR62Q9BZJ7 368 aa13.4□□□□□ -0.27
NCDN-203ENST00000373253 DENND2DQ9H6A0 471 aaPredicted RBP13.4□□□□□ -0.27
NCDN-203ENST00000373253 THAP1Q9NVV9 213 aa13.4□□□□□ -0.27
NCDN-203ENST00000373253 AK5Q9Y6K8 562 aa13.4□□□□□ -0.27
NCDN-203ENST00000373253 I6L893 689 aaPredicted RBP13.39□□□□□ -0.27
NCDN-203ENST00000373253 SEMA5AQ13591 1074 aa13.39□□□□□ -0.27
NCDN-203ENST00000373253 NFE2Q16621 373 aaPredicted RBP13.39□□□□□ -0.27
NCDN-203ENST00000373253 DEFB115Q30KQ5 88 aa13.39□□□□□ -0.27
NCDN-203ENST00000373253 ALFQ53S48 1182 aa13.39□□□□□ -0.27
NCDN-203ENST00000373253 TMEM198Q66K66 360 aa13.39□□□□□ -0.27
NCDN-203ENST00000373253 DCLRE1AQ6PJP8 1040 aa13.39□□□□□ -0.27
NCDN-203ENST00000373253 PIF1Q9H611 641 aa13.39□□□□□ -0.27
NCDN-203ENST00000373253 AAR2Q9Y312 384 aaKnown RBP13.39□□□□□ -0.27
NCDN-203ENST00000373253 TMEM233B4DJY2 109 aa13.39□□□□□ -0.27
NCDN-203ENST00000373253 RPL9P32969 192 aaKnown RBP13.39□□□□□ -0.27
NCDN-203ENST00000373253 ZRANB3Q5FWF4 1079 aa13.39□□□□□ -0.27
NCDN-203ENST00000373253 SLC24A5Q71RS6 500 aa13.39□□□□□ -0.27
NCDN-203ENST00000373253 SERINC5Q86VE9 423 aa13.39□□□□□ -0.27
NCDN-203ENST00000373253 BBS5Q8N3I7 341 aa13.39□□□□□ -0.27
NCDN-203ENST00000373253 ZNF781Q8N8C0 355 aa13.39□□□□□ -0.27
NCDN-203ENST00000373253 FBXO27Q8NI29 283 aa13.39□□□□□ -0.27
NCDN-203ENST00000373253 LRRC39Q96DD0 335 aa13.39□□□□□ -0.27
NCDN-203ENST00000373253 CAPNS2Q96L46 248 aa13.39□□□□□ -0.27
NCDN-203ENST00000373253 ACBD6Q9BR61 282 aa13.39□□□□□ -0.27
NCDN-203ENST00000373253 ACE2Q9BYF1 805 aaPredicted RBP13.39□□□□□ -0.27
NCDN-203ENST00000373253 NKX1-2Q9UD57 310 aaPredicted RBP13.39□□□□□ -0.27
NCDN-203ENST00000373253 AP2A1O95782 977 aa13.38□□□□□ -0.27
NCDN-203ENST00000373253 UBTFL6P0CB48 400 aaPredicted RBP13.38□□□□□ -0.27
NCDN-203ENST00000373253 CCDC166P0CW27 439 aa13.38□□□□□ -0.27
NCDN-203ENST00000373253 ATXN8OSP0DMR3 200 aa13.38□□□□□ -0.27
NCDN-203ENST00000373253 HARS2P49590 506 aaKnown RBP13.38□□□□□ -0.27
NCDN-203ENST00000373253 SPDYAQ5MJ70 313 aa13.38□□□□□ -0.27
NCDN-203ENST00000373253 PDPK2PQ6A1A2 396 aa13.38□□□□□ -0.27
NCDN-203ENST00000373253 SMIM14Q96QK8 99 aa13.38□□□□□ -0.27
NCDN-203ENST00000373253 ALG9Q9H6U8 611 aa13.38□□□□□ -0.27
NCDN-203ENST00000373253 ZMYND8Q9ULU4 1186 aaPredicted RBP13.38□□□□□ -0.27
NCDN-203ENST00000373253 SLC12A4Q9UP95 1085 aa13.38□□□□□ -0.27
NCDN-203ENST00000373253 SSX2IPQ9Y2D8 614 aa13.38□□□□□ -0.27
NCDN-203ENST00000373253 PTCH2Q9Y6C5 1203 aa13.38□□□□□ -0.27
NCDN-203ENST00000373253 F5H5T6 163 aa13.38□□□□□ -0.27
NCDN-203ENST00000373253 AURKAO14965 403 aa13.38□□□□□ -0.27
NCDN-203ENST00000373253 HLA-DQB2P05538 268 aa13.38□□□□□ -0.27
NCDN-203ENST00000373253 CKMP06732 381 aa13.38□□□□□ -0.27
NCDN-203ENST00000373253 CKBP12277 381 aa13.38□□□□□ -0.27
NCDN-203ENST00000373253 ACVRL1P37023 503 aa13.38□□□□□ -0.27
NCDN-203ENST00000373253 RALGPS1Q5JS13 557 aa13.38□□□□□ -0.27
NCDN-203ENST00000373253 KLC3Q6P597 504 aa13.38□□□□□ -0.27
NCDN-203ENST00000373253 LMNTD2Q8IXW0 634 aa13.38□□□□□ -0.27
NCDN-203ENST00000373253 LPCAT1Q8NF37 534 aa13.38□□□□□ -0.27
NCDN-203ENST00000373253 BTBD10Q9BSF8 475 aa13.38□□□□□ -0.27
NCDN-203ENST00000373253 NAT9Q9BTE0 207 aa13.38□□□□□ -0.27
NCDN-203ENST00000373253 C20orf27Q9GZN8 174 aa13.38□□□□□ -0.27
NCDN-203ENST00000373253 MAF1Q9H063 256 aa13.38□□□□□ -0.27
NCDN-203ENST00000373253 ILKAPQ9H0C8 392 aaPredicted RBP13.38□□□□□ -0.27
NCDN-203ENST00000373253 SRRM3A6NNA2 597 aaPredicted RBP13.38□□□□□ -0.27
NCDN-203ENST00000373253 H0Y626 953 aa13.38□□□□□ -0.27
NCDN-203ENST00000373253 TPST1O60507 370 aa13.38□□□□□ -0.27
NCDN-203ENST00000373253 TRIM13O60858 407 aa13.38□□□□□ -0.27
NCDN-203ENST00000373253 INHAP05111 366 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms