RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 CPXM1Q96SM3 734 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 MLPHQ9BV36 600 aaPredicted RBP10.62□□□□□ -0.71
NUP188-201ENST00000372577 CNTNAP1P78357 1384 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 TPST1O60507 370 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 COL6A2P12110 1019 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 DEFA1P59665 94 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 DEFA3P59666 94 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 ELF3P78545 371 aaPredicted RBP10.62□□□□□ -0.71
NUP188-201ENST00000372577 SH3D19Q5HYK7 790 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 PRAMEF19Q5SWL8 479 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 RAP1GAP2Q684P5 730 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 ACTRT2Q8TDY3 377 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 HGH1Q9BTY7 390 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 NXF3Q9H4D5 531 aaKnown RBP10.62□□□□□ -0.71
NUP188-201ENST00000372577 COG5Q9UP83 839 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 GLTPD2A6NH11 291 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 ZBTB14O43829 449 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 ADRA1BP35368 520 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 NEK3P51956 506 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 C12orf29Q8N999 325 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 C1orf127Q8N9H9 656 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 ATL1Q8WXF7 558 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 TRMOQ9BU70 441 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 SIX2Q9NPC8 291 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 ARHGEF9O43307 516 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 DCXO43602 365 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 FAM58BPP0C7Q3 252 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 CD52P31358 61 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 GPC1P35052 558 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 SKIV2LQ15477 1246 aaKnown RBP10.62□□□□□ -0.71
NUP188-201ENST00000372577 LIPMQ5VYY2 423 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 LRRC74BQ6ZQY2 392 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 ZNF467Q7Z7K2 595 aaPredicted RBP10.62□□□□□ -0.71
NUP188-201ENST00000372577 TMEM132CQ8N3T6 1108 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 QKIQ96PU8 341 aaKnown RBP eCLIP10.62□□□□□ -0.71
NUP188-201ENST00000372577 PIH1D1Q9NWS0 290 aaKnown RBP10.62□□□□□ -0.71
NUP188-201ENST00000372577 ZNF180Q9UJW8 692 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 ZNF541Q9H0D2 1346 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 DUSP11O75319 330 aaKnown RBP10.62□□□□□ -0.71
NUP188-201ENST00000372577 LRCH4O75427 683 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 SERPINA6P08185 405 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 POLR2EP19388 210 aaKnown RBP10.62□□□□□ -0.71
NUP188-201ENST00000372577 FMO4P31512 558 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 KRT20P35900 424 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 CCT8P50990 548 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 STARD3Q14849 445 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 SLC44A1Q8WWI5 657 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 P2RY11Q96G91 374 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 PPP1R16AQ96I34 528 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 CSPG4P5Q96PW8 444 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 C9orf16Q9BUW7 83 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 ERVK-5Q9HDB9 667 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 C15orf41Q9Y2V0 281 aa10.62□□□□□ -0.71
NUP188-201ENST00000372577 KRT8P05787 483 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 PACS1Q6VY07 963 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 TDRPQ86YL5 185 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 ZFRQ96KR1 1074 aaKnown RBP10.61□□□□□ -0.71
NUP188-201ENST00000372577 SLC39A8Q9C0K1 460 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 FZD8Q9H461 694 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 ATP13A3Q9H7F0 1226 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 SMPD4Q9NXE4 827 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 V9GYQ6 96 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 PHGDHO43175 533 aaKnown RBP10.61□□□□□ -0.71
NUP188-201ENST00000372577 EDF1O60869 148 aaKnown RBP10.61□□□□□ -0.71
NUP188-201ENST00000372577 CBX6O95503 412 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 FGF19O95750 216 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 PGK1P00558 417 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 LDLRP01130 860 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 GJB1P08034 283 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 FAM163BP0C2L3 166 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 ATXN8OSP0DMR3 200 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 PCNAP12004 261 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 CYP1B1Q16678 543 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 RIPOR1Q6ZS17 1223 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 ZCCHC23Q6ZST2 131 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 APTXQ7Z2E3 356 aaKnown RBP10.61□□□□□ -0.71
NUP188-201ENST00000372577 FAM126BQ8IXS8 530 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 SNX27Q96L92 541 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 HNRNPABQ99729 332 aaKnown RBP10.61□□□□□ -0.71
NUP188-201ENST00000372577 CEP44Q9C0F1 390 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 FETUBQ9UGM5 382 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 LGALS13Q9UHV8 139 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 ZNF214Q9UL59 606 aaPredicted RBP10.61□□□□□ -0.71
NUP188-201ENST00000372577 SOWAHBA6NEL2 793 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 BTBD19C9JJ37 291 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 PSMD12O00232 456 aaPredicted RBP10.61□□□□□ -0.71
NUP188-201ENST00000372577 ZBTB22O15209 634 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 HDAC3O15379 428 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 CLPTM1O96005 669 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 ANXA5P08758 320 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 PPP2R1BP30154 601 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 NME5P56597 212 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 BST1Q10588 318 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 ASTE1Q2TB18 679 aaPredicted RBP10.61□□□□□ -0.71
NUP188-201ENST00000372577 PAGE2BQ5JRK9 111 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 IRGCQ6NXR0 463 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 OR6Y1Q8NGX8 325 aa10.61□□□□□ -0.71
NUP188-201ENST00000372577 RP9Q8TA86 221 aaKnown RBP10.61□□□□□ -0.71
NUP188-201ENST00000372577 DIS3LQ8TF46 1054 aaKnown RBP10.61□□□□□ -0.71
NUP188-201ENST00000372577 FAM136AQ96C01 138 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms