RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 FCF1Q9Y324 198 aaKnown RBP24.41■■□□□ 1.5
PFDN2-201ENST00000368010 NUMA1Q14980 2115 aa24.41■■□□□ 1.5
PFDN2-201ENST00000368010 DCHS1Q96JQ0 3298 aa24.41■■□□□ 1.5
PFDN2-201ENST00000368010 EEF2KO00418 725 aaKnown RBP24.4■■□□□ 1.5
PFDN2-201ENST00000368010 PRNPP04156 253 aa24.4■■□□□ 1.5
PFDN2-201ENST00000368010 CYP1A2P05177 515 aa24.4■■□□□ 1.5
PFDN2-201ENST00000368010 IGHV4-34P06331 123 aa24.4■■□□□ 1.5
PFDN2-201ENST00000368010 PCK1P35558 622 aa24.4■■□□□ 1.5
PFDN2-201ENST00000368010 PIGHQ14442 188 aaPredicted RBP24.4■■□□□ 1.5
PFDN2-201ENST00000368010 UAP1L1Q3KQV9 507 aa24.4■■□□□ 1.5
PFDN2-201ENST00000368010 PARP15Q460N3 678 aa24.4■■□□□ 1.5
PFDN2-201ENST00000368010 CHST14Q8NCH0 376 aa24.4■■□□□ 1.5
PFDN2-201ENST00000368010 TMIEQ8NEW7 156 aa24.4■■□□□ 1.5
PFDN2-201ENST00000368010 C1orf216Q8TAB5 229 aa24.4■■□□□ 1.5
PFDN2-201ENST00000368010 NUP85Q9BW27 656 aa24.4■■□□□ 1.5
PFDN2-201ENST00000368010 ZDHHC5Q9C0B5 715 aa24.4■■□□□ 1.5
PFDN2-201ENST00000368010 DEF6Q9H4E7 631 aa24.4■■□□□ 1.5
PFDN2-201ENST00000368010 NOL6Q9H6R4 1146 aaKnown RBP24.4■■□□□ 1.5
PFDN2-201ENST00000368010 OSGEPQ9NPF4 335 aa24.4■■□□□ 1.5
PFDN2-201ENST00000368010 ANAPC7Q9UJX3 599 aa24.4■■□□□ 1.5
PFDN2-201ENST00000368010 NENFQ9UMX5 172 aa24.4■■□□□ 1.5
PFDN2-201ENST00000368010 ZSCAN5CA6NGD5 496 aaPredicted RBP24.39■■□□□ 1.49
PFDN2-201ENST00000368010 PLK4O00444 970 aa24.39■■□□□ 1.49
PFDN2-201ENST00000368010 KPNA3O00505 521 aaPredicted RBP24.39■■□□□ 1.49
PFDN2-201ENST00000368010 KDELR3O43731 214 aa24.39■■□□□ 1.49
PFDN2-201ENST00000368010 MFAP3LO75121 409 aa24.39■■□□□ 1.49
PFDN2-201ENST00000368010 ZNF821O75541 412 aaPredicted RBP24.39■■□□□ 1.49
PFDN2-201ENST00000368010 CD160O95971 181 aa24.39■■□□□ 1.49
PFDN2-201ENST00000368010 CTSLP07711 333 aa24.39■■□□□ 1.49
PFDN2-201ENST00000368010 DNA2P51530 1060 aa24.39■■□□□ 1.49
PFDN2-201ENST00000368010 CNTN1Q12860 1018 aa24.39■■□□□ 1.49
PFDN2-201ENST00000368010 GRIK2Q13002 908 aa24.39■■□□□ 1.49
PFDN2-201ENST00000368010 CARD16Q5EG05 197 aa24.39■■□□□ 1.49
PFDN2-201ENST00000368010 SARM1Q6SZW1 724 aa24.39■■□□□ 1.49
PFDN2-201ENST00000368010 DPY19L3Q6ZPD9 716 aa24.39■■□□□ 1.49
PFDN2-201ENST00000368010 CYP4V2Q6ZWL3 525 aaPredicted RBP24.39■■□□□ 1.49
PFDN2-201ENST00000368010 UMODL1-AS1Q8N2C9 162 aa24.39■■□□□ 1.49
PFDN2-201ENST00000368010 MINDY1Q8N5J2 469 aa24.39■■□□□ 1.49
PFDN2-201ENST00000368010 GRIN3AQ8TCU5 1115 aa24.39■■□□□ 1.49
PFDN2-201ENST00000368010 ISG20Q96AZ6 181 aaKnown RBP24.39■■□□□ 1.49
PFDN2-201ENST00000368010 KDM4CQ9H3R0 1056 aa24.39■■□□□ 1.49
PFDN2-201ENST00000368010 DYRK4Q9NR20 520 aa24.39■■□□□ 1.49
PFDN2-201ENST00000368010 ABHD10Q9NUJ1 306 aa24.39■■□□□ 1.49
PFDN2-201ENST00000368010 IL36AQ9UHA7 158 aa24.39■■□□□ 1.49
PFDN2-201ENST00000368010 IP6K2Q9UHH9 426 aa24.39■■□□□ 1.49
PFDN2-201ENST00000368010 TPX2Q9ULW0 747 aaKnown RBP24.39■■□□□ 1.49
PFDN2-201ENST00000368010 ACTL7AQ9Y615 435 aa24.39■■□□□ 1.49
PFDN2-201ENST00000368010 PCDH15Q96QU1 1955 aa24.38■■□□□ 1.49
PFDN2-201ENST00000368010 SSU72P8A0A1W2PR75 194 aa24.38■■□□□ 1.49
PFDN2-201ENST00000368010 RASA4BC9J798 803 aa24.38■■□□□ 1.49
PFDN2-201ENST00000368010 DAPK3O43293 454 aa24.38■■□□□ 1.49
PFDN2-201ENST00000368010 RASA4O43374 803 aa24.38■■□□□ 1.49
PFDN2-201ENST00000368010 KCNA4P22459 653 aa24.38■■□□□ 1.49
PFDN2-201ENST00000368010 AFF3P51826 1226 aaKnown RBP24.38■■□□□ 1.49
PFDN2-201ENST00000368010 ZNF135P52742 658 aaPredicted RBP24.38■■□□□ 1.49
PFDN2-201ENST00000368010 CCDC15Q0P6D6 951 aa24.38■■□□□ 1.49
PFDN2-201ENST00000368010 MAPK8IP2Q13387 824 aaPredicted RBP24.38■■□□□ 1.49
PFDN2-201ENST00000368010 SLC18A3Q16572 532 aa24.38■■□□□ 1.49
PFDN2-201ENST00000368010 PPP6R3Q5H9R7 873 aaPredicted RBP24.38■■□□□ 1.49
PFDN2-201ENST00000368010 PPM1JQ5JR12 505 aa24.38■■□□□ 1.49
PFDN2-201ENST00000368010 AGBL4Q5VU57 503 aa24.38■■□□□ 1.49
PFDN2-201ENST00000368010 ARHGEF26Q96DR7 871 aa24.38■■□□□ 1.49
PFDN2-201ENST00000368010 HMCESQ96FZ2 354 aa24.38■■□□□ 1.49
PFDN2-201ENST00000368010 KCTD15Q96SI1 283 aaPredicted RBP24.38■■□□□ 1.49
PFDN2-201ENST00000368010 TM6SF2Q9BZW4 377 aa24.38■■□□□ 1.49
PFDN2-201ENST00000368010 TM9SF3Q9HD45 589 aa24.38■■□□□ 1.49
PFDN2-201ENST00000368010 SLCO1B1Q9Y6L6 691 aa24.38■■□□□ 1.49
PFDN2-201ENST00000368010 CACNA1AO00555 2505 aa24.38■■□□□ 1.49
PFDN2-201ENST00000368010 PI4KAP42356 2102 aa24.38■■□□□ 1.49
PFDN2-201ENST00000368010 TBC1D3DA0A087WVF3 549 aa24.37■■□□□ 1.49
PFDN2-201ENST00000368010 TBC1D3IA0A087WXS9 549 aa24.37■■□□□ 1.49
PFDN2-201ENST00000368010 TBC1D3EA0A087X179 549 aa24.37■■□□□ 1.49
PFDN2-201ENST00000368010 TBC1D3KA0A087X1G2 549 aa24.37■■□□□ 1.49
PFDN2-201ENST00000368010 A0A1W2PPC4 97 aa24.37■■□□□ 1.49
PFDN2-201ENST00000368010 TBC1D3FA6NER0 549 aaPredicted RBP24.37■■□□□ 1.49
PFDN2-201ENST00000368010 TBC1D3LB9A6J9 549 aa24.37■■□□□ 1.49
PFDN2-201ENST00000368010 PLRG1O43660 514 aaKnown RBP24.37■■□□□ 1.49
PFDN2-201ENST00000368010 BUB1O43683 1085 aa24.37■■□□□ 1.49
PFDN2-201ENST00000368010 TBC1D3HP0C7X1 549 aa24.37■■□□□ 1.49
PFDN2-201ENST00000368010 CCR5P51681 352 aa24.37■■□□□ 1.49
PFDN2-201ENST00000368010 CCNHP51946 323 aaPredicted RBP24.37■■□□□ 1.49
PFDN2-201ENST00000368010 TEAD4Q15561 434 aa24.37■■□□□ 1.49
PFDN2-201ENST00000368010 ARSIQ5FYB1 569 aa24.37■■□□□ 1.49
PFDN2-201ENST00000368010 TBC1D3GQ6DHY5 549 aa24.37■■□□□ 1.49
PFDN2-201ENST00000368010 TBC1D3CQ6IPX1 549 aa24.37■■□□□ 1.49
PFDN2-201ENST00000368010 LEKR1Q6ZMV7 388 aa24.37■■□□□ 1.49
PFDN2-201ENST00000368010 RFX8Q6ZV50 586 aa24.37■■□□□ 1.49
PFDN2-201ENST00000368010 TBC1D3Q8IZP1 549 aaPredicted RBP24.37■■□□□ 1.49
PFDN2-201ENST00000368010 NIPA2Q8N8Q9 360 aa24.37■■□□□ 1.49
PFDN2-201ENST00000368010 CASKIN2Q8WXE0 1202 aa24.37■■□□□ 1.49
PFDN2-201ENST00000368010 PPP1R16AQ96I34 528 aa24.37■■□□□ 1.49
PFDN2-201ENST00000368010 HEPHQ9BQS7 1158 aa24.37■■□□□ 1.49
PFDN2-201ENST00000368010 ORAI3Q9BRQ5 295 aa24.37■■□□□ 1.49
PFDN2-201ENST00000368010 WASF2Q9Y6W5 498 aa24.37■■□□□ 1.49
PFDN2-201ENST00000368010 DNAH14Q0VDD8 3507 aa24.36■■□□□ 1.49
PFDN2-201ENST00000368010 C10orf142B7Z368 130 aa24.36■■□□□ 1.49
PFDN2-201ENST00000368010 AKR1B10O60218 316 aa24.36■■□□□ 1.49
PFDN2-201ENST00000368010 OPHN1O60890 802 aa24.36■■□□□ 1.49
PFDN2-201ENST00000368010 GRIA4P48058 902 aa24.36■■□□□ 1.49
PFDN2-201ENST00000368010 NDST2P52849 883 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms