RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 VAC14Q08AM6 782 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 SLC51AQ86UW1 340 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 C12orf56Q8IXR9 622 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 FIG4Q92562 907 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 H3BMM5 538 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 ADH1CP00326 375 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 EIF2S1P05198 315 aaKnown RBP18.81■□□□□ 0.6
CLIP2-202ENST00000361545 CALB2P22676 271 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 GUCA1AP43080 201 aaPredicted RBP18.81■□□□□ 0.6
CLIP2-202ENST00000361545 CLK1P49759 484 aaKnown RBP18.81■□□□□ 0.6
CLIP2-202ENST00000361545 TRAF2Q12933 501 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 PTPN20Q4JDL3 420 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 CAPRIN2Q6IMN6 1127 aaKnown RBP18.81■□□□□ 0.6
CLIP2-202ENST00000361545 ALLCQ8N6M5 410 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 DHX33Q9H6R0 707 aaKnown RBP18.81■□□□□ 0.6
CLIP2-202ENST00000361545 hCG_1818297A0A087WSY0 165 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 ADRA1DP25100 572 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 STXBP5Q5T5C0 1151 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 IRF2BP2Q7Z5L9 587 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 CCT7Q99832 543 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 ZMYND8Q9ULU4 1186 aaPredicted RBP18.81■□□□□ 0.6
CLIP2-202ENST00000361545 NCANO14594 1321 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 A0A087X1B8 175 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 CDK16Q00536 496 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 IRF8Q02556 426 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 ACSM2AQ08AH3 577 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 ACSM2BQ68CK6 577 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 TTC33Q6PID6 262 aaPredicted RBP18.81■□□□□ 0.6
CLIP2-202ENST00000361545 FAM126BQ8IXS8 530 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 DEFB107AQ8IZN7 70 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 RIN3Q8TB24 985 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 BRI3BPQ8WY22 251 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 CXorf40BQ96DE9 158 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 CERS2Q96G23 380 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 GDF3Q9NR23 364 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 ARHGAP28Q9P2N2 729 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 KLQ9UEF7 1012 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 GNPTGQ9UJJ9 305 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 IGLV3-22A0A075B6J6 115 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 ANKDD1BA6NHY2 528 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 ZNF839A8K0R7 811 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 CRYMQ14894 314 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 KCTD19Q17RG1 926 aaPredicted RBP18.8■□□□□ 0.6
CLIP2-202ENST00000361545 SLC25A52Q3SY17 297 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 PIAS1O75925 651 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 FASTKQ14296 549 aaKnown RBP18.8■□□□□ 0.6
CLIP2-202ENST00000361545 PTPRNQ16849 979 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 NOL9Q5SY16 702 aaKnown RBP18.8■□□□□ 0.6
CLIP2-202ENST00000361545 CYP20A1Q6UW02 462 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 MICU2Q8IYU8 434 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 C1orf127Q8N9H9 656 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 CPXM1Q96SM3 734 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 H3BQF6 201 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 ANXA5P08758 320 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 HOXB8P17481 243 aaPredicted RBP18.8■□□□□ 0.6
CLIP2-202ENST00000361545 MBTD1Q05BQ5 628 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 RUNX1T1Q06455 604 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 BBS12Q6ZW61 710 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 SPPL2AQ8TCT8 520 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 GAS2L1Q99501 681 aaPredicted RBP18.8■□□□□ 0.6
CLIP2-202ENST00000361545 SEPHS2Q99611 448 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 KLHL28Q9NXS3 571 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 AKAP7Q9P0M2 348 aaPredicted RBP18.8■□□□□ 0.6
CLIP2-202ENST00000361545 ARL5CA6NH57 179 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 INPP4BO15327 924 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 ACRP10323 421 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 KLC1Q07866 573 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 NAB1Q13506 487 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 FUT10Q6P4F1 479 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 HOMEZQ8IX15 550 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 ZNF786Q8N393 782 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 TRPC4APQ8TEL6 797 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 RERGLQ9H628 205 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 NDUFAF1Q9Y375 327 aa18.8■□□□□ 0.6
CLIP2-202ENST00000361545 WDR47O94967 919 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 PPIGQ13427 754 aaKnown RBP eCLIP18.79■□□□□ 0.62e-7■■■□□ 14.8
CLIP2-202ENST00000361545 VSTM1Q6UX27 236 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 IFNL1Q8IU54 200 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 LRRC49Q8IUZ0 686 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 ZMAT2Q96NC0 199 aaKnown RBP18.79■□□□□ 0.6
CLIP2-202ENST00000361545 CCDC167Q9P0B6 97 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 SLC5A3P53794 718 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 ILF2Q12905 390 aaKnown RBP18.79■□□□□ 0.6
CLIP2-202ENST00000361545 BRMS1LQ5PSV4 323 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 ATAD3BQ5T9A4 648 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 FAM46CQ5VWP2 391 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 AFTPHQ6ULP2 937 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 STAG3L4Q8TBR4 150 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 SCLYQ96I15 445 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 ZFYVE1Q9HBF4 777 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 VTI1BQ9UEU0 232 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 ZNF214Q9UL59 606 aaPredicted RBP18.79■□□□□ 0.6
CLIP2-202ENST00000361545 CILPO75339 1184 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 PIGNO95427 931 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 CCT8P50990 548 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 CNSTQ6PJW8 725 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 SYT12Q8IV01 421 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 DBF4BQ8NFT6 615 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 NUDT14O95848 222 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 LTA4HP09960 611 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms