RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 ZNF558Q96NG5 402 aa10.09□□□□□ -0.79
SIN3A-201ENST00000360439 CUEDC1Q9NWM3 386 aaPredicted RBP10.09□□□□□ -0.79
SIN3A-201ENST00000360439 TJP2Q9UDY2 1190 aa10.09□□□□□ -0.79
SIN3A-201ENST00000360439 SNRPAP09012 282 aaKnown RBP10.08□□□□□ -0.8
SIN3A-201ENST00000360439 ADSLP30566 484 aaPredicted RBP10.08□□□□□ -0.8
SIN3A-201ENST00000360439 PPP3CAQ08209 521 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 TRAF2Q12933 501 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 LSAMPQ13449 338 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 FUT11Q495W5 492 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 TIGD2Q4W5G0 525 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 MDH1BQ5I0G3 518 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 BORAQ6PGQ7 559 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 C3orf62Q6ZUJ4 267 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 PGLYRP2Q96PD5 576 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 LRMDAQ9H2I8 198 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 PKD2L2Q9NZM6 624 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 DPP7Q9UHL4 492 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 THSD7AQ9UPZ6 1657 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 SCN7AQ01118 1682 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 KPNA7A9QM74 516 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 CYBBP04839 570 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 ITGA9Q13797 1035 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 SNX17Q15036 470 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 PDK4Q16654 411 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 OVOS1Q6IE37 1185 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 GPAT2Q6NUI2 795 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 ACOT1Q86TX2 421 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 TDRPQ86YL5 185 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 ADGRF2Q8IZF7 708 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 TAS1R2Q8TE23 839 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 SCPEP1Q9HB40 452 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 COG5Q9UP83 839 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 NOX1Q9Y5S8 564 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 MAGEB16A2A368 324 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 A6NL46 340 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 SULT1B1O43704 296 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 ALOX5P09917 674 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 ACO1P21399 889 aaKnown RBP10.08□□□□□ -0.8
SIN3A-201ENST00000360439 CNTFP26441 200 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 CAPSQ13938 189 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 GSTA3Q16772 222 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 CEP19Q96LK0 163 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 TMEM245Q9H330 911 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 RUBCNLQ9H714 662 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 PFDN2Q9UHV9 154 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 SMIM35A0A1B0GVV1 85 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 NT5C1B-RDH14C9J2C7 533 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 ATP6V1G2-DDX39BF2Z307 99 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 CKMP06732 381 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 HADHAP40939 763 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 SPIRE1Q08AE8 756 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 HIC1Q14526 733 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 ZNF268Q14587 947 aaPredicted RBP10.08□□□□□ -0.8
SIN3A-201ENST00000360439 TAF1BQ53T94 588 aaPredicted RBP10.08□□□□□ -0.8
SIN3A-201ENST00000360439 ATAD3BQ5T9A4 648 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 FAM122CQ6P4D5 195 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 ZDHHC24Q6UX98 284 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 ZPBP2Q6X784 338 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 TBC1D19Q8N5T2 526 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 BTBD10Q9BSF8 475 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 NRAPQ86VF7 1730 aa10.08□□□□□ -0.8
SIN3A-201ENST00000360439 ANKRD34BA5PLL1 514 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 GRAP2O75791 330 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 G0S2P27469 103 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 ICAM3P32942 547 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 GALNT1Q10472 559 aaPredicted RBP10.07□□□□□ -0.8
SIN3A-201ENST00000360439 SLC9A4Q6AI14 798 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 C17orf99Q6UX52 265 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 SV2AQ7L0J3 742 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 ZNF467Q7Z7K2 595 aaPredicted RBP10.07□□□□□ -0.8
SIN3A-201ENST00000360439 PHF13Q86YI8 300 aaPredicted RBP10.07□□□□□ -0.8
SIN3A-201ENST00000360439 LILRB1Q8NHL6 650 aaPredicted RBP10.07□□□□□ -0.8
SIN3A-201ENST00000360439 TUBGCP3Q96CW5 907 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 CNDP1Q96KN2 507 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 GBA3Q9H227 469 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 FAIMQ9NVQ4 179 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 TOR4AQ9NXH8 423 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 PADI3Q9ULW8 664 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 ZNF536O15090 1300 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 ZMYM2Q9UBW7 1377 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 A0A0G2JPF8 293 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 LACTBL1A8MY62 500 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 HNRNPCL3B7ZW38 293 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 NCAM2O15394 837 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 FOXD2O60548 495 aaPredicted RBP10.07□□□□□ -0.8
SIN3A-201ENST00000360439 HNRNPCL4P0DMR1 293 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 VBP1P61758 197 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 PRPSAP1Q14558 356 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 NOMO2Q5JPE7 1267 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 TDRD10Q5VZ19 366 aaKnown RBP10.07□□□□□ -0.8
SIN3A-201ENST00000360439 SMYD5Q6GMV2 418 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 RBM23Q86U06 439 aaKnown RBP10.07□□□□□ -0.8
SIN3A-201ENST00000360439 TICAM1Q8IUC6 712 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 PGBD3Q8N328 593 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 MFSD14AQ96MC6 490 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 PAFAH2Q99487 392 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 ABCG4Q9H172 646 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 DCAF16Q9NXF7 216 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 NEMP1O14524 444 aa10.07□□□□□ -0.8
SIN3A-201ENST00000360439 PEX1O43933 1283 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms