RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 POU6F1Q14863 301 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 SFT2D3Q587I9 215 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 LINC00523Q86TU6 105 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 TAC4Q86UU9 113 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 SNX32Q86XE0 403 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 TMEM86AQ8N2M4 240 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 SPATA22Q8NHS9 363 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 RDH11Q8TC12 318 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 TRAPPC9Q96Q05 1148 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 GAD1Q99259 594 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 NUF2Q9BZD4 464 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 DRC3Q9H069 523 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 SLC38A7Q9NVC3 462 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 RRN3Q9NYV6 651 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 PACSIN3Q9UKS6 424 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 ANKRD6Q9Y2G4 727 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 MYLKQ15746 1914 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 C17orf102A2RUQ5 167 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 HHLA1C9JL84 531 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 AP3B1O00203 1094 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 RNASEH1O60930 286 aaKnown RBP8.73□□□□□ -1.01
RFX3-202ENST00000358730 SLC35E2BP0CK96 405 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 SRGAP2BP0DMP2 458 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 CD1EP15812 388 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 CXCR3P49682 368 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 NUMBP49757 651 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 RPL14P50914 215 aaKnown RBP8.73□□□□□ -1.01
RFX3-202ENST00000358730 AFF1P51825 1210 aaKnown RBP8.73□□□□□ -1.01
RFX3-202ENST00000358730 NAGLUP54802 743 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 ZNF460Q14592 562 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 FAM110CQ1W6H9 321 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 LSM12Q3MHD2 195 aaKnown RBP8.73□□□□□ -1.01
RFX3-202ENST00000358730 ARL13AQ5H913 290 aaPredicted RBP8.73□□□□□ -1.01
RFX3-202ENST00000358730 THEMIS2Q5TEJ8 643 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 SLC30A9Q6PML9 568 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 ACAD11Q709F0 780 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 BHLHA9Q7RTU4 235 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 ANKRD23Q86SG2 305 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 SLC41A1Q8IVJ1 513 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 ATPAF2Q8N5M1 289 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 CNTD1Q8N815 330 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 C3orf58Q8NDZ4 430 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 IPMKQ8NFU5 416 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 MYLPFQ96A32 169 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 PARK7Q99497 189 aaKnown RBP8.73□□□□□ -1.01
RFX3-202ENST00000358730 KIFC1Q9BW19 673 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 C1QTNF1Q9BXJ1 281 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 XPR1Q9UBH6 696 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 PTCH2Q9Y6C5 1203 aa8.73□□□□□ -1.01
RFX3-202ENST00000358730 EME2A4GXA9 379 aaPredicted RBP8.72□□□□□ -1.01
RFX3-202ENST00000358730 CASTOR2A6NHX0 329 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 UNCXA6NJT0 531 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 HAS3O00219 553 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 CABYRO75952 493 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 MT-CYBP00156 380 aaPredicted RBP8.72□□□□□ -1.01
RFX3-202ENST00000358730 SBK3P0C264 359 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 THRAP10827 490 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 ZNF135P52742 658 aaPredicted RBP8.72□□□□□ -1.01
RFX3-202ENST00000358730 MPP1Q00013 466 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 SLC12A1Q13621 1099 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 HNRNPDQ14103 355 aaKnown RBP8.72□□□□□ -1.01
RFX3-202ENST00000358730 GRAMD1BQ3KR37 738 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 NXNQ6DKJ4 435 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 LRRC8EQ6NSJ5 796 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 ARHGAP36Q6ZRI8 547 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 TMC7Q7Z402 723 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 DENND6AQ8IWF6 608 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 FSTL5Q8N475 847 aaPredicted RBP8.72□□□□□ -1.01
RFX3-202ENST00000358730 LPPQ93052 612 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 TBL1YQ9BQ87 522 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 SIK2Q9H0K1 926 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 PAPOLBQ9NRJ5 636 aaKnown RBP8.72□□□□□ -1.01
RFX3-202ENST00000358730 ZDHHC7Q9NXF8 308 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 CDH9Q9ULB4 789 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 RUVBL2Q9Y230 463 aaKnown RBP8.72□□□□□ -1.01
RFX3-202ENST00000358730 CDYLQ9Y232 598 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 DDHD2O94830 711 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 VAPBO95292 243 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 THP07101 528 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 FAM163BP0C2L3 166 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 PPARGP37231 505 aaPredicted RBP8.72□□□□□ -1.01
RFX3-202ENST00000358730 CPT1AP50416 773 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 CSRP3P50461 194 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 COG7P83436 770 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 PRKAA1Q13131 559 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 CTBP1Q13363 440 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 MSLNQ13421 630 aaPredicted RBP8.72□□□□□ -1.01
RFX3-202ENST00000358730 MED21Q13503 144 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 PDCD2Q16342 344 aaPredicted RBP8.72□□□□□ -1.01
RFX3-202ENST00000358730 TMEM198Q66K66 360 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 DCLRE1AQ6PJP8 1040 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 C16orf89Q6UX73 402 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 KBTBD6Q86V97 674 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 CENPLQ8N0S6 344 aaPredicted RBP8.72□□□□□ -1.01
RFX3-202ENST00000358730 TMEM151AQ8N4L1 468 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 ZSCAN18Q8TBC5 510 aaPredicted RBP8.72□□□□□ -1.01
RFX3-202ENST00000358730 DPF3Q92784 378 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 CNDP1Q96KN2 507 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 CATSPER2Q96P56 530 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 FICDQ9BVA6 458 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms