RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 MAP3K20Q9NYL2 800 aaKnown RBP8.88□□□□□ -0.99
COL6A6-201ENST00000358511 LEF1Q9UJU2 399 aaPredicted RBP8.88□□□□□ -0.99
COL6A6-201ENST00000358511 TCRBV9S1A1TA0A576 114 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 TRIM64CA6NLI5 447 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 BBIP1A8MTZ0 92 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 ERVK-10P10266 1014 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 DNAJB2P25686 324 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 CYP4F2P78329 520 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 CYP4F3Q08477 520 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 OR2T34Q8NGX1 318 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 OR2T3Q8NH03 318 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 SYTL5Q8TDW5 730 aaPredicted RBP8.88□□□□□ -0.99
COL6A6-201ENST00000358511 TBCCD1Q9NVR7 557 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 SSR3Q9UNL2 185 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 CEP170BQ9Y4F5 1589 aaPredicted RBP8.88□□□□□ -0.99
COL6A6-201ENST00000358511 AGPSO00116 658 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 PAGE2Q7Z2X7 111 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 LEMD2Q8NC56 503 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 SLITRK2Q9H156 845 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 CXorf21Q9HAI6 301 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 AKAP7Q9P0M2 348 aaPredicted RBP8.88□□□□□ -0.99
COL6A6-201ENST00000358511 SLAIN2Q9P270 581 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 CPS1P31327 1500 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 CST1P01037 141 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 ETFBP38117 255 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 PPIL2Q13356 520 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 TAF8Q7Z7C8 310 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 TRPV1Q8NER1 839 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 PIDD1Q9HB75 910 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 MORF4L1Q9UBU8 362 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 PADI4Q9UM07 663 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 DDX3YO15523 660 aaKnown RBP8.87□□□□□ -0.99
COL6A6-201ENST00000358511 CYP1A1P04798 512 aaPredicted RBP8.87□□□□□ -0.99
COL6A6-201ENST00000358511 CLTBP09497 229 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 GPSM2P81274 684 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 ANGEL2Q5VTE6 544 aaKnown RBP8.87□□□□□ -0.99
COL6A6-201ENST00000358511 SH3RF1Q7Z6J0 888 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 TARS2Q9BW92 718 aaKnown RBP8.87□□□□□ -0.99
COL6A6-201ENST00000358511 NDUFB10O96000 172 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 HOXB8P17481 243 aaPredicted RBP8.87□□□□□ -0.99
COL6A6-201ENST00000358511 NAMPTP43490 491 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 SH3D19Q5HYK7 790 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 ZNF572Q7Z3I7 529 aaPredicted RBP8.87□□□□□ -0.99
COL6A6-201ENST00000358511 WDR49Q8IV35 697 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 FAM205AQ6ZU69 1335 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 PIK3C2BO00750 1634 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 NR3C2P08235 984 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 VDRP11473 427 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 MAGEA8P43361 318 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 RFX5P48382 616 aaPredicted RBP8.87□□□□□ -0.99
COL6A6-201ENST00000358511 SPESP1Q6UW49 350 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 ADCK2Q7Z695 626 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 ZDHHC17Q8IUH5 632 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 C7orf26Q96N11 449 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 ACTR8Q9H981 624 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 PIN4Q9Y237 131 aaKnown RBP8.87□□□□□ -0.99
COL6A6-201ENST00000358511 NOTOA8MTQ0 251 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 UGT1A9O60656 530 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 ECDO95905 644 aaPredicted RBP8.87□□□□□ -0.99
COL6A6-201ENST00000358511 LBPP18428 481 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 UGT1A6P19224 532 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 UGT1A1P22309 533 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 UGT1A4P22310 534 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 UGT1A3P35503 534 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 UGT1A5P35504 534 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 CACNB2Q08289 660 aaPredicted RBP8.87□□□□□ -0.99
COL6A6-201ENST00000358511 GRIK3Q13003 919 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 CDC16Q13042 620 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 FGD3Q5JSP0 725 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 SLC44A2Q8IWA5 706 aaPredicted RBP8.87□□□□□ -0.99
COL6A6-201ENST00000358511 FBXO30Q8TB52 745 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 FAM136AQ96C01 138 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 DNAJC1Q96KC8 554 aaKnown RBP8.87□□□□□ -0.99
COL6A6-201ENST00000358511 UGT1A7Q9HAW7 530 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 UGT1A10Q9HAW8 530 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 UGT1A8Q9HAW9 530 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 MLXQ9UH92 298 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 TRHDEQ9UKU6 1024 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 DIP2AQ14689 1571 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 PSMD11O00231 422 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 RGS14O43566 566 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 LRIG2O94898 1065 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 C6orf222P0C671 652 aaPredicted RBP8.87□□□□□ -0.99
COL6A6-201ENST00000358511 EPHA3P29320 983 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 PRDX6P30041 224 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 MMP14P50281 582 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 MCCD1P59942 119 aaPredicted RBP8.87□□□□□ -0.99
COL6A6-201ENST00000358511 RPL26P61254 145 aaKnown RBP8.87□□□□□ -0.99
COL6A6-201ENST00000358511 DDX39BQ13838 428 aaKnown RBP8.87□□□□□ -0.99
COL6A6-201ENST00000358511 CIB1Q99828 191 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 APOL2Q9BQE5 337 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 MCUBQ9NWR8 336 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 CMTM6Q9NX76 183 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 TAS2R13Q9NYV9 303 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 LGALS13Q9UHV8 139 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 DPYSL4O14531 572 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 UGT2B11O75310 529 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 RAD17O75943 681 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 DHFRP00374 187 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 ASLP04424 464 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms