RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 KRIT1O00522 736 aa15.52■□□□□ 0.08
TPM1-206ENST00000358278 MATN3O15232 486 aa15.52■□□□□ 0.08
TPM1-206ENST00000358278 KLF8O95600 359 aaPredicted RBP15.52■□□□□ 0.08
TPM1-206ENST00000358278 IL12RB1P42701 662 aa15.52■□□□□ 0.08
TPM1-206ENST00000358278 WASP42768 502 aa15.52■□□□□ 0.08
TPM1-206ENST00000358278 SNX1Q13596 522 aa15.52■□□□□ 0.08
TPM1-206ENST00000358278 BYSLQ13895 437 aaKnown RBP15.52■□□□□ 0.08
TPM1-206ENST00000358278 ZNF235Q14590 738 aa15.52■□□□□ 0.08
TPM1-206ENST00000358278 RFTN1Q14699 578 aaPredicted RBP15.52■□□□□ 0.08
TPM1-206ENST00000358278 LBRQ14739 615 aaKnown RBP15.52■□□□□ 0.08
TPM1-206ENST00000358278 SIX1Q15475 284 aaPredicted RBP15.52■□□□□ 0.08
TPM1-206ENST00000358278 DLG2Q15700 870 aa15.52■□□□□ 0.08
TPM1-206ENST00000358278 INO80DQ53TQ3 878 aaPredicted RBP15.52■□□□□ 0.08
TPM1-206ENST00000358278 DNTTIP2Q5QJE6 756 aaKnown RBP15.52■□□□□ 0.08
TPM1-206ENST00000358278 Q6ZS52 159 aa15.52■□□□□ 0.08
TPM1-206ENST00000358278 BBS5Q8N3I7 341 aa15.52■□□□□ 0.08
TPM1-206ENST00000358278 ZNF366Q8N895 744 aa15.52■□□□□ 0.08
TPM1-206ENST00000358278 IL17RCQ8NAC3 791 aa15.52■□□□□ 0.08
TPM1-206ENST00000358278 KDM1BQ8NB78 822 aa15.52■□□□□ 0.08
TPM1-206ENST00000358278 TXNDC5Q8NBS9 432 aaKnown RBP15.52■□□□□ 0.08
TPM1-206ENST00000358278 MYO19Q96H55 970 aa15.52■□□□□ 0.08
TPM1-206ENST00000358278 ACOX2Q99424 681 aa15.52■□□□□ 0.08
TPM1-206ENST00000358278 CINPQ9BW66 212 aaPredicted RBP15.52■□□□□ 0.08
TPM1-206ENST00000358278 HOMER3Q9NSC5 361 aa15.52■□□□□ 0.08
TPM1-206ENST00000358278 DNPEPQ9ULA0 475 aa15.52■□□□□ 0.08
TPM1-206ENST00000358278 STON1Q9Y6Q2 735 aa15.52■□□□□ 0.08
TPM1-206ENST00000358278 TTC34A8MYJ7 566 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 MTSS1O43312 755 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 SMAD6O43541 496 aaKnown RBP15.51■□□□□ 0.07
TPM1-206ENST00000358278 LIASO43766 372 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 ATP9BO43861 1147 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 SLC34A2O95436 690 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 CD160O95971 181 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 HLA-EP13747 358 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 CCNB1P14635 433 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 PRKCHP24723 683 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 NTSR1P30989 418 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 VASPP50552 380 aaPredicted RBP15.51■□□□□ 0.07
TPM1-206ENST00000358278 RENBPP51606 427 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 HNRNPDQ14103 355 aaKnown RBP15.51■□□□□ 0.07
TPM1-206ENST00000358278 HSF5Q4G112 596 aaPredicted RBP15.51■□□□□ 0.07
TPM1-206ENST00000358278 MARC1Q5VT66 337 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 C22orf39Q6P5X5 142 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 SLC35B2Q8TB61 432 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 FATE1Q969F0 183 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 HAUS2Q9NVX0 235 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 SEPT3Q9UH03 358 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 TTLL3Q9Y4R7 772 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 CACNA1IQ9P0X4 2223 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 WASH3PC4AMC7 463 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 BNIP3LO60238 219 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 ZNF189O75820 626 aaPredicted RBP15.51■□□□□ 0.07
TPM1-206ENST00000358278 PEX11BO96011 259 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 EPHX1P07099 455 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 DCNP07585 359 aaKnown RBP15.51■□□□□ 0.07
TPM1-206ENST00000358278 VAV1P15498 845 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 MMP13P45452 471 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 RHOAP61586 193 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 SLC10A7Q0GE19 358 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 CCNG2Q16589 344 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 CWF19L1Q69YN2 538 aaKnown RBP15.51■□□□□ 0.07
TPM1-206ENST00000358278 Q6ZVU0 165 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 HTR3CQ8WXA8 447 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 MAML1Q92585 1016 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 COL25A1Q9BXS0 654 aaPredicted RBP15.51■□□□□ 0.07
TPM1-206ENST00000358278 TM6SF2Q9BZW4 377 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 CEP44Q9C0F1 390 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 TMEM245Q9H330 911 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 C10orf88Q9H8K7 445 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 CDC23Q9UJX2 597 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 ZNF148Q9UQR1 794 aa15.51■□□□□ 0.07
TPM1-206ENST00000358278 EDDM13A0A1B0GTR0 161 aa15.5■□□□□ 0.07
TPM1-206ENST00000358278 KCNN4O15554 427 aa15.5■□□□□ 0.07
TPM1-206ENST00000358278 SYNCRIPO60506 623 aaKnown RBP15.5■□□□□ 0.07
TPM1-206ENST00000358278 STK10O94804 968 aaKnown RBP15.5■□□□□ 0.07
TPM1-206ENST00000358278 CHRM1P11229 460 aaPredicted RBP15.5■□□□□ 0.07
TPM1-206ENST00000358278 HOXB2P14652 356 aa15.5■□□□□ 0.07
TPM1-206ENST00000358278 RBL1P28749 1068 aa15.5■□□□□ 0.07
TPM1-206ENST00000358278 RECQLP46063 649 aaPredicted RBP15.5■□□□□ 0.07
TPM1-206ENST00000358278 RPS9P46781 194 aaKnown RBP15.5■□□□□ 0.07
TPM1-206ENST00000358278 FZD5Q13467 585 aa15.5■□□□□ 0.07
TPM1-206ENST00000358278 STARD3Q14849 445 aa15.5■□□□□ 0.07
TPM1-206ENST00000358278 HNRNPA1L2Q32P51 320 aaKnown RBP15.5■□□□□ 0.07
TPM1-206ENST00000358278 EOGTQ5NDL2 527 aa15.5■□□□□ 0.07
TPM1-206ENST00000358278 PCDH20Q8N6Y1 951 aaKnown RBP15.5■□□□□ 0.07
TPM1-206ENST00000358278 PRELID2Q8N945 189 aa15.5■□□□□ 0.07
TPM1-206ENST00000358278 NKD2Q969F2 451 aaPredicted RBP15.5■□□□□ 0.07
TPM1-206ENST00000358278 CLDN23Q96B33 292 aa15.5■□□□□ 0.07
TPM1-206ENST00000358278 CCDC114Q96M63 670 aa15.5■□□□□ 0.07
TPM1-206ENST00000358278 TMEM121Q9BTD3 319 aa15.5■□□□□ 0.07
TPM1-206ENST00000358278 CEP41Q9BYV8 373 aa15.5■□□□□ 0.07
TPM1-206ENST00000358278 TNKS2Q9H2K2 1166 aa15.5■□□□□ 0.07
TPM1-206ENST00000358278 MMP17Q9ULZ9 603 aa15.5■□□□□ 0.07
TPM1-206ENST00000358278 BCLAF3A2AJT9 711 aaKnown RBP15.49■□□□□ 0.07
TPM1-206ENST00000358278 CFAP69A5D8W1 941 aa15.49■□□□□ 0.07
TPM1-206ENST00000358278 SGK1O00141 431 aa15.49■□□□□ 0.07
TPM1-206ENST00000358278 RNF103O00237 685 aa15.49■□□□□ 0.07
TPM1-206ENST00000358278 ATG13O75143 517 aa15.49■□□□□ 0.07
TPM1-206ENST00000358278 JCHAINP01591 159 aa15.49■□□□□ 0.07
TPM1-206ENST00000358278 IFI35P80217 286 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms