RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 TRAPPC5Q8IUR0 188 aa11.65□□□□□ -0.54
SPTBN1-202ENST00000356805 PLA2R1Q13018 1463 aa11.65□□□□□ -0.54
SPTBN1-202ENST00000356805 MYH6P13533 1939 aa11.65□□□□□ -0.55
SPTBN1-202ENST00000356805 WDR27A2RRH5 827 aa11.65□□□□□ -0.55
SPTBN1-202ENST00000356805 S100A6P06703 90 aa11.65□□□□□ -0.55
SPTBN1-202ENST00000356805 MMP13P45452 471 aa11.65□□□□□ -0.55
SPTBN1-202ENST00000356805 LHX1P48742 406 aa11.65□□□□□ -0.55
SPTBN1-202ENST00000356805 ST3GAL1Q11201 340 aa11.65□□□□□ -0.55
SPTBN1-202ENST00000356805 DGCR6Q14129 220 aa11.65□□□□□ -0.55
SPTBN1-202ENST00000356805 CYP2R1Q6VVX0 501 aa11.65□□□□□ -0.55
SPTBN1-202ENST00000356805 MYLPFQ96A32 169 aa11.65□□□□□ -0.55
SPTBN1-202ENST00000356805 TAF6LQ9Y6J9 622 aa11.65□□□□□ -0.55
SPTBN1-202ENST00000356805 HAT1O14929 419 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 PDCD4Q53EL6 469 aaKnown RBP11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 IL27RAQ6UWB1 636 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 STK32CQ86UX6 486 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 FBXO16Q8IX29 292 aaPredicted RBP11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 NSUN4Q96CB9 384 aaKnown RBP11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 CAB39LQ9H9S4 337 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 ANKEF1Q9NU02 776 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 PRKAR1AP10644 381 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 FMO4P31512 558 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 CDC42EP5Q6NZY7 148 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 GPRC5CQ9NQ84 441 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 RBM22Q9NW64 420 aaKnown RBP eCLIP11.64□□□□□ -0.556e-7■■■□□ 16.1
SPTBN1-202ENST00000356805 TNFSF13BQ9Y275 285 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 POLD2P49005 469 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 KCNJ2P63252 427 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 TNFAIP8L3Q5GJ75 292 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 DEPDC4Q8N2C3 294 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 ZHX1-C8orf76Q96EF9 292 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 SLC4A9Q96Q91 983 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 ZCCHC2Q9C0B9 1178 aaKnown RBP11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 MRASO14807 208 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 CTDNEP1O95476 244 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 CEBPGP53567 150 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 ADIGQ0VDE8 80 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 LIN54Q6MZP7 749 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 ISLR2Q6UXK2 745 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 ZC3H7AQ8IWR0 971 aaKnown RBP11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 CHST13Q8NET6 341 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 ITFG1Q8TB96 612 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 MCOLN3Q8TDD5 553 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 REXO5Q96IC2 774 aaKnown RBP11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 PLA2G12BQ9BX93 195 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 ZDHHC6Q9H6R6 413 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 CMTM6Q9NX76 183 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 AMD1P17707 334 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 RPL4P36578 427 aaKnown RBP11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 TKTL1P51854 596 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 EZH2Q15910 746 aaKnown RBP11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 ZFP69Q49AA0 526 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 SMIM5Q71RC9 77 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 KCNMB4Q86W47 210 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 MUC13Q9H3R2 512 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 SPAG4Q9NPE6 437 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 A0A088AWK7 358 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 F9P00740 461 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 CYP11B1P15538 503 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 ZNF10P21506 573 aaPredicted RBP11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 RP9Q8TA86 221 aaKnown RBP11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 ZNF354BQ96LW1 612 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 CBWD1Q9BRT8 395 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 HGH1Q9BTY7 390 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 ATXN3LQ9H3M9 355 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 SMPD4Q9NXE4 827 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 PCDHA3Q9Y5H8 950 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 GSAPA4D1B5 854 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 CDC40O60508 579 aaKnown RBP eCLIP11.64□□□□□ -0.558e-9■□□□□ 8.7
SPTBN1-202ENST00000356805 KCNH1O95259 989 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 ADRA2BP18089 450 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 CLK3P49761 638 aaKnown RBP11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 CLCN3P51790 818 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 PLK1P53350 603 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 PRR5LQ6MZQ0 368 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 PYDC1Q8WXC3 89 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 PRRG4Q9BZD6 226 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 ZNHIT2Q9UHR6 403 aa11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 GPC6Q9Y625 555 aaPredicted RBP11.64□□□□□ -0.55
SPTBN1-202ENST00000356805 HOXA2O43364 376 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 RGS14O43566 566 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 ETS1P14921 441 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 GTF2A2P52657 109 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 RRP1BQ14684 758 aaKnown RBP11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 INSCQ1MX18 579 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 TBC1D16Q8TBP0 767 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 POMKQ9H5K3 350 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 AGPAT3Q9NRZ7 376 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 BTN3A1O00481 513 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 TIPRLO75663 272 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 ADSLP30566 484 aaPredicted RBP11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 RENBPP51606 427 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 ZNHIT3Q15649 155 aaPredicted RBP11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 C5orf22Q49AR2 442 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 FAM126BQ8IXS8 530 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 APBA2Q99767 749 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 MYH11P35749 1972 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 BICRAQ9NZM4 1560 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 COX7A2P14406 83 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 IFI35P80217 286 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms