RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 FERP16591 822 aa17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 SERPINH1P50454 418 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 RACK1P63244 317 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 KRT83P78385 493 aa17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 C1QBPQ07021 282 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 TRIP6Q15654 476 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 C6orf118Q5T5N4 469 aa17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 TBC1D3GQ6DHY5 549 aa17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 TBC1D3CQ6IPX1 549 aa17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 LUZP1Q86V48 1076 aa17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 SPATS2Q86XZ4 545 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 TBC1D3Q8IZP1 549 aaPredicted RBP17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 GRIN3AQ8TCU5 1115 aa17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 GATA6Q92908 595 aa17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 NTAN1Q96AB6 310 aa17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 PEBP4Q96S96 227 aa17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 CBX8Q9HC52 389 aa17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 TMEM248Q9NWD8 314 aa17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 PAXBP1Q9Y5B6 917 aa17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 USP24Q9UPU5 2620 aa17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 DDX3XO00571 662 aaKnown RBP eCLIP17.08■□□□□ 0.321e-16■■■□□ 15.4
PDLIM7-201ENST00000355572 VILLO15195 856 aa17.08■□□□□ 0.32
PDLIM7-201ENST00000355572 ALOX15BO15296 676 aa17.08■□□□□ 0.32
PDLIM7-201ENST00000355572 FTH1P19P0C7X4 201 aa17.08■□□□□ 0.32
PDLIM7-201ENST00000355572 SKILP12757 684 aa17.08■□□□□ 0.32
PDLIM7-201ENST00000355572 ZNF143P52747 638 aaPredicted RBP17.08■□□□□ 0.32
PDLIM7-201ENST00000355572 NR1I3Q14994 352 aa17.08■□□□□ 0.32
PDLIM7-201ENST00000355572 CA9Q16790 459 aa17.08■□□□□ 0.32
PDLIM7-201ENST00000355572 ARSIQ5FYB1 569 aa17.08■□□□□ 0.32
PDLIM7-201ENST00000355572 RWDD4Q6NW29 188 aaKnown RBP17.08■□□□□ 0.32
PDLIM7-201ENST00000355572 DNAJC24Q6P3W2 148 aa17.08■□□□□ 0.32
PDLIM7-201ENST00000355572 KDM7AQ6ZMT4 941 aa17.08■□□□□ 0.32
PDLIM7-201ENST00000355572 CYP4V2Q6ZWL3 525 aaPredicted RBP17.08■□□□□ 0.32
PDLIM7-201ENST00000355572 MARCH9Q86YJ5 346 aa17.08■□□□□ 0.32
PDLIM7-201ENST00000355572 GATAD2AQ86YP4 633 aa17.08■□□□□ 0.32
PDLIM7-201ENST00000355572 OR6K2Q8NGY2 324 aa17.08■□□□□ 0.32
PDLIM7-201ENST00000355572 MYOCQ99972 504 aa17.08■□□□□ 0.32
PDLIM7-201ENST00000355572 HAUS4Q9H6D7 363 aa17.08■□□□□ 0.32
PDLIM7-201ENST00000355572 FZD10Q9ULW2 581 aa17.08■□□□□ 0.32
PDLIM7-201ENST00000355572 ZFR2Q9UPR6 939 aaKnown RBP17.08■□□□□ 0.32
PDLIM7-201ENST00000355572 MYLKQ15746 1914 aa17.08■□□□□ 0.32
PDLIM7-201ENST00000355572 KPNA3O00505 521 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-201ENST00000355572 LEFTY1O75610 366 aa17.07■□□□□ 0.32
PDLIM7-201ENST00000355572 ATXN1LP0C7T5 689 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-201ENST00000355572 RHOQP17081 205 aa17.07■□□□□ 0.32
PDLIM7-201ENST00000355572 CD38P28907 300 aa17.07■□□□□ 0.32
PDLIM7-201ENST00000355572 PBX1P40424 430 aa17.07■□□□□ 0.32
PDLIM7-201ENST00000355572 SCAPQ12770 1279 aa17.07■□□□□ 0.32
PDLIM7-201ENST00000355572 ST3GAL2Q16842 350 aa17.07■□□□□ 0.32
PDLIM7-201ENST00000355572 SCYL2Q6P3W7 929 aa17.07■□□□□ 0.32
PDLIM7-201ENST00000355572 RAB44Q7Z6P3 723 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-201ENST00000355572 SETD7Q8WTS6 366 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-201ENST00000355572 TBC1D31Q96DN5 1066 aa17.07■□□□□ 0.32
PDLIM7-201ENST00000355572 SERAC1Q96JX3 654 aa17.07■□□□□ 0.32
PDLIM7-201ENST00000355572 PPP1R9BQ96SB3 815 aa17.07■□□□□ 0.32
PDLIM7-201ENST00000355572 TM6SF2Q9BZW4 377 aa17.07■□□□□ 0.32
PDLIM7-201ENST00000355572 FZD3Q9NPG1 666 aa17.07■□□□□ 0.32
PDLIM7-201ENST00000355572 AASDHPPTQ9NRN7 309 aa17.07■□□□□ 0.32
PDLIM7-201ENST00000355572 A0A1B0GTQ1 180 aa17.06■□□□□ 0.32
PDLIM7-201ENST00000355572 SMTNL1A8MU46 457 aa17.06■□□□□ 0.32
PDLIM7-201ENST00000355572 C1QTNF3-AMACRE9PGA6 284 aa17.06■□□□□ 0.32
PDLIM7-201ENST00000355572 SPINT1O43278 529 aa17.06■□□□□ 0.32
PDLIM7-201ENST00000355572 PRLRP16471 622 aa17.06■□□□□ 0.32
PDLIM7-201ENST00000355572 TNFAIP3P21580 790 aa17.06■□□□□ 0.32
PDLIM7-201ENST00000355572 PRKCIP41743 596 aa17.06■□□□□ 0.32
PDLIM7-201ENST00000355572 CLCN6P51797 869 aa17.06■□□□□ 0.32
PDLIM7-201ENST00000355572 CCNHP51946 323 aaPredicted RBP17.06■□□□□ 0.32
PDLIM7-201ENST00000355572 MAMLD1Q13495 774 aa17.06■□□□□ 0.32
PDLIM7-201ENST00000355572 FGL2Q14314 439 aa17.06■□□□□ 0.32
PDLIM7-201ENST00000355572 TEAD4Q15561 434 aa17.06■□□□□ 0.32
PDLIM7-201ENST00000355572 ASIC2Q16515 512 aa17.06■□□□□ 0.32
PDLIM7-201ENST00000355572 ARL13BQ3SXY8 428 aa17.06■□□□□ 0.32
PDLIM7-201ENST00000355572 SEL1L3Q68CR1 1132 aa17.06■□□□□ 0.32
PDLIM7-201ENST00000355572 PLEKHA7Q6IQ23 1121 aa17.06■□□□□ 0.32
PDLIM7-201ENST00000355572 IL27RAQ6UWB1 636 aa17.06■□□□□ 0.32
PDLIM7-201ENST00000355572 ZNF783Q6ZMS7 281 aa17.06■□□□□ 0.32
PDLIM7-201ENST00000355572 SLFN11Q7Z7L1 901 aa17.06■□□□□ 0.32
PDLIM7-201ENST00000355572 TRIM69Q86WT6 500 aa17.06■□□□□ 0.32
PDLIM7-201ENST00000355572 TMIEQ8NEW7 156 aa17.06■□□□□ 0.32
PDLIM7-201ENST00000355572 NAT10Q9H0A0 1025 aaKnown RBP17.06■□□□□ 0.32
PDLIM7-201ENST00000355572 AIPL1Q9NZN9 384 aa17.06■□□□□ 0.32
PDLIM7-201ENST00000355572 IL36AQ9UHA7 158 aa17.06■□□□□ 0.32
PDLIM7-201ENST00000355572 GGT7Q9UJ14 662 aa17.06■□□□□ 0.32
PDLIM7-201ENST00000355572 MYO6Q9UM54 1294 aa17.06■□□□□ 0.32
PDLIM7-201ENST00000355572 SHROOM3Q8TF72 1996 aa17.06■□□□□ 0.32
PDLIM7-201ENST00000355572 WDFY3Q8IZQ1 3526 aa17.05■□□□□ 0.32
PDLIM7-201ENST00000355572 ASPMQ8IZT6 3477 aa17.05■□□□□ 0.32
PDLIM7-201ENST00000355572 A0A1W2PQC6 194 aa17.05■□□□□ 0.32
PDLIM7-201ENST00000355572 SLC7A4O43246 635 aa17.05■□□□□ 0.32
PDLIM7-201ENST00000355572 RNGTTO60942 597 aaKnown RBP17.05■□□□□ 0.32
PDLIM7-201ENST00000355572 ABL2P42684 1182 aa17.05■□□□□ 0.32
PDLIM7-201ENST00000355572 MAPKAPK2P49137 400 aa17.05■□□□□ 0.32
PDLIM7-201ENST00000355572 NXPH1P58417 271 aa17.05■□□□□ 0.32
PDLIM7-201ENST00000355572 BNIP3Q12983 259 aa17.05■□□□□ 0.32
PDLIM7-201ENST00000355572 KLHL40Q2TBA0 621 aa17.05■□□□□ 0.32
PDLIM7-201ENST00000355572 CARD16Q5EG05 197 aa17.05■□□□□ 0.32
PDLIM7-201ENST00000355572 ATXN7L2Q5T6C5 722 aaPredicted RBP17.05■□□□□ 0.32
PDLIM7-201ENST00000355572 FAM46CQ5VWP2 391 aa17.05■□□□□ 0.32
PDLIM7-201ENST00000355572 HGSNATQ68CP4 663 aa17.05■□□□□ 0.32
PDLIM7-201ENST00000355572 NAPEPLDQ6IQ20 393 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms