RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 PPM1NQ8N819 430 aa23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 SMYD2Q9NRG4 433 aa23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 HAUS2Q9NVX0 235 aa23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 PIH1D1Q9NWS0 290 aaKnown RBP23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 FAM237BA0A1B0GVD1 139 aa23.22■■□□□ 1.31
SCAMP3-202ENST00000355379 CXorf49A8MYA2 514 aaPredicted RBP23.22■■□□□ 1.31
SCAMP3-202ENST00000355379 FOXO6A8MYZ6 492 aa23.22■■□□□ 1.31
SCAMP3-202ENST00000355379 CCL16O15467 120 aa23.22■■□□□ 1.31
SCAMP3-202ENST00000355379 PRPF4O43172 522 aaKnown RBP eCLIP23.22■■□□□ 1.31
SCAMP3-202ENST00000355379 FAM155BO75949 473 aa23.22■■□□□ 1.31
SCAMP3-202ENST00000355379 USP1O94782 785 aa23.22■■□□□ 1.31
SCAMP3-202ENST00000355379 MT-CYBP00156 380 aaPredicted RBP23.22■■□□□ 1.31
SCAMP3-202ENST00000355379 RHOCP08134 193 aa23.22■■□□□ 1.31
SCAMP3-202ENST00000355379 DDX6P26196 483 aaKnown RBP eCLIP23.22■■□□□ 1.312e-7■■■□□ 18.3
SCAMP3-202ENST00000355379 HOXD9P28356 352 aaPredicted RBP23.22■■□□□ 1.31
SCAMP3-202ENST00000355379 ETFBP38117 255 aa23.22■■□□□ 1.31
SCAMP3-202ENST00000355379 SGSHP51688 502 aa23.22■■□□□ 1.31
SCAMP3-202ENST00000355379 LGSNQ5TDP6 509 aa23.22■■□□□ 1.31
SCAMP3-202ENST00000355379 TRMT10BQ6PF06 316 aaKnown RBP23.22■■□□□ 1.31
SCAMP3-202ENST00000355379 LEKR1Q6ZMV7 388 aa23.22■■□□□ 1.31
SCAMP3-202ENST00000355379 CTAGE3PQ8IX95 158 aa23.22■■□□□ 1.31
SCAMP3-202ENST00000355379 MAB21L3Q8N8X9 362 aa23.22■■□□□ 1.31
SCAMP3-202ENST00000355379 MICAL1Q8TDZ2 1067 aa23.22■■□□□ 1.31
SCAMP3-202ENST00000355379 SLC22A17Q8WUG5 538 aa23.22■■□□□ 1.31
SCAMP3-202ENST00000355379 ATXN2LQ8WWM7 1075 aaKnown RBP23.22■■□□□ 1.31
SCAMP3-202ENST00000355379 TADA1Q96BN2 335 aa23.22■■□□□ 1.31
SCAMP3-202ENST00000355379 SMC6Q96SB8 1091 aa23.22■■□□□ 1.31
SCAMP3-202ENST00000355379 CORO1BQ9BR76 489 aa23.22■■□□□ 1.31
SCAMP3-202ENST00000355379 TRIM56Q9BRZ2 755 aaKnown RBP23.22■■□□□ 1.31
SCAMP3-202ENST00000355379 ACE2Q9BYF1 805 aaPredicted RBP23.22■■□□□ 1.31
SCAMP3-202ENST00000355379 EPN3Q9H201 632 aa23.22■■□□□ 1.31
SCAMP3-202ENST00000355379 KCNK9Q9NPC2 374 aa23.22■■□□□ 1.31
SCAMP3-202ENST00000355379 SOX13Q9UN79 622 aa23.22■■□□□ 1.31
SCAMP3-202ENST00000355379 SMG5Q9UPR3 1016 aaKnown RBP23.22■■□□□ 1.31
SCAMP3-202ENST00000355379 SOBPA7XYQ1 873 aa23.21■■□□□ 1.31
SCAMP3-202ENST00000355379 GRM6O15303 877 aa23.21■■□□□ 1.31
SCAMP3-202ENST00000355379 TSPAN3O60637 253 aa23.21■■□□□ 1.31
SCAMP3-202ENST00000355379 MYL4P12829 197 aa23.21■■□□□ 1.31
SCAMP3-202ENST00000355379 PTPN2P17706 415 aa23.21■■□□□ 1.31
SCAMP3-202ENST00000355379 SERPINB9P50453 376 aa23.21■■□□□ 1.31
SCAMP3-202ENST00000355379 ZXDBP98169 803 aa23.21■■□□□ 1.31
SCAMP3-202ENST00000355379 CAMK1Q14012 370 aa23.21■■□□□ 1.31
SCAMP3-202ENST00000355379 RFTN1Q14699 578 aaPredicted RBP23.21■■□□□ 1.31
SCAMP3-202ENST00000355379 DENND5AQ6IQ26 1287 aa23.21■■□□□ 1.31
SCAMP3-202ENST00000355379 RANBP10Q6VN20 620 aa23.21■■□□□ 1.31
SCAMP3-202ENST00000355379 HJURPQ8NCD3 748 aaPredicted RBP23.21■■□□□ 1.31
SCAMP3-202ENST00000355379 IPMKQ8NFU5 416 aa23.21■■□□□ 1.31
SCAMP3-202ENST00000355379 CDKL2Q92772 493 aa23.21■■□□□ 1.31
SCAMP3-202ENST00000355379 MRGPRX2Q96LB1 330 aa23.21■■□□□ 1.31
SCAMP3-202ENST00000355379 FICDQ9BVA6 458 aa23.21■■□□□ 1.31
SCAMP3-202ENST00000355379 CCDC134Q9H6E4 229 aa23.21■■□□□ 1.31
SCAMP3-202ENST00000355379 ARNT2Q9HBZ2 717 aa23.21■■□□□ 1.31
SCAMP3-202ENST00000355379 RPS6KL1Q9Y6S9 549 aa23.21■■□□□ 1.31
SCAMP3-202ENST00000355379 FAM169AQ9Y6X4 670 aa23.21■■□□□ 1.31
SCAMP3-202ENST00000355379 A0A0D9SEW6 157 aa23.2■■□□□ 1.3
SCAMP3-202ENST00000355379 A0A1W2PRU2 124 aa23.2■■□□□ 1.3
SCAMP3-202ENST00000355379 CLASP2O75122 1294 aaKnown RBP23.2■■□□□ 1.3
SCAMP3-202ENST00000355379 PIAS1O75925 651 aa23.2■■□□□ 1.3
SCAMP3-202ENST00000355379 ARHGEF15O94989 841 aa23.2■■□□□ 1.3
SCAMP3-202ENST00000355379 CKMP06732 381 aa23.2■■□□□ 1.3
SCAMP3-202ENST00000355379 NIPAL4Q0D2K0 466 aa23.2■■□□□ 1.3
SCAMP3-202ENST00000355379 CERCAMQ5T4B2 595 aa23.2■■□□□ 1.3
SCAMP3-202ENST00000355379 IL31Q6EBC2 164 aa23.2■■□□□ 1.3
SCAMP3-202ENST00000355379 BBS5Q8N3I7 341 aa23.2■■□□□ 1.3
SCAMP3-202ENST00000355379 CPXM2Q8N436 756 aa23.2■■□□□ 1.3
SCAMP3-202ENST00000355379 LEMD2Q8NC56 503 aa23.2■■□□□ 1.3
SCAMP3-202ENST00000355379 OR7D4Q8NG98 312 aa23.2■■□□□ 1.3
SCAMP3-202ENST00000355379 OR52K2Q8NGK3 314 aa23.2■■□□□ 1.3
SCAMP3-202ENST00000355379 ALKBH8Q96BT7 664 aaKnown RBP23.2■■□□□ 1.3
SCAMP3-202ENST00000355379 APOL2Q9BQE5 337 aa23.2■■□□□ 1.3
SCAMP3-202ENST00000355379 MAN1C1Q9NR34 630 aa23.2■■□□□ 1.3
SCAMP3-202ENST00000355379 A0A1W2PPM1 405 aa23.19■■□□□ 1.3
SCAMP3-202ENST00000355379 TYW5A2RUC4 315 aaKnown RBP23.19■■□□□ 1.3
SCAMP3-202ENST00000355379 KRT37O76014 449 aa23.19■■□□□ 1.3
SCAMP3-202ENST00000355379 MMP2P08253 660 aa23.19■■□□□ 1.3
SCAMP3-202ENST00000355379 HNRNPA1P09651 372 aaKnown RBP eCLIP23.19■■□□□ 1.3
SCAMP3-202ENST00000355379 MYOGP15173 224 aa23.19■■□□□ 1.3
SCAMP3-202ENST00000355379 CNTFP26441 200 aa23.19■■□□□ 1.3
SCAMP3-202ENST00000355379 IRS1P35568 1242 aa23.19■■□□□ 1.3
SCAMP3-202ENST00000355379 OXCT1P55809 520 aa23.19■■□□□ 1.3
SCAMP3-202ENST00000355379 MGAT5Q09328 741 aa23.19■■□□□ 1.3
SCAMP3-202ENST00000355379 ANKRD20A4Q4UJ75 823 aa23.19■■□□□ 1.3
SCAMP3-202ENST00000355379 ALG1LQ6GMV1 187 aa23.19■■□□□ 1.3
SCAMP3-202ENST00000355379 CXorf57Q6NSI4 855 aaKnown RBP23.19■■□□□ 1.3
SCAMP3-202ENST00000355379 POTEHQ6S545 545 aa23.19■■□□□ 1.3
SCAMP3-202ENST00000355379 PGBD5Q8N414 524 aa23.19■■□□□ 1.3
SCAMP3-202ENST00000355379 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.19■■□□□ 1.3
SCAMP3-202ENST00000355379 ARRDC2Q8TBH0 407 aa23.19■■□□□ 1.3
SCAMP3-202ENST00000355379 PTCD2Q8WV60 388 aaKnown RBP23.19■■□□□ 1.3
SCAMP3-202ENST00000355379 MTBPQ96DY7 904 aa23.19■■□□□ 1.3
SCAMP3-202ENST00000355379 TGS1Q96RS0 853 aaKnown RBP23.19■■□□□ 1.3
SCAMP3-202ENST00000355379 KIFC1Q9BW19 673 aa23.19■■□□□ 1.3
SCAMP3-202ENST00000355379 FSD1LQ9BXM9 530 aa23.19■■□□□ 1.3
SCAMP3-202ENST00000355379 POLR1EQ9GZS1 481 aaKnown RBP23.19■■□□□ 1.3
SCAMP3-202ENST00000355379 MRM3Q9HC36 420 aaKnown RBP23.19■■□□□ 1.3
SCAMP3-202ENST00000355379 ATP13A1Q9HD20 1204 aa23.19■■□□□ 1.3
SCAMP3-202ENST00000355379 SH3BP1Q9Y3L3 701 aa23.19■■□□□ 1.3
SCAMP3-202ENST00000355379 FAM47DPA6NHR8 397 aa23.18■■□□□ 1.3
SCAMP3-202ENST00000355379 PMPCBO75439 489 aa23.18■■□□□ 1.3
SCAMP3-202ENST00000355379 SNRPAP09012 282 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms