RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 H2AFYO75367 372 aaKnown RBP13.89□□□□□ -0.19
SMC6-201ENST00000351948 ATG7O95352 703 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 PIGRP01833 764 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 LPIN1Q14693 890 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 FAM151BQ6UXP7 276 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 CCDC126Q96EE4 140 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 ZBED3Q96IU2 234 aaPredicted RBP13.89□□□□□ -0.19
SMC6-201ENST00000351948 AGO3Q9H9G7 860 aaKnown RBP13.89□□□□□ -0.19
SMC6-201ENST00000351948 MID1IP1Q9NPA3 183 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 LAMB4A4D0S4 1761 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 CARNS1A5YM72 827 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 ALDH1A2O94788 518 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 BAIAP3O94812 1187 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 PARNO95453 639 aaKnown RBP13.89□□□□□ -0.19
SMC6-201ENST00000351948 OR56A5P0C7T3 313 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 TCF4P15884 667 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 PRR23CQ6ZRP0 262 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 TAGAPQ8N103 731 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 ARHGEF4Q9NR80 690 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 PSD3Q9NYI0 1048 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 EVLQ9UI08 416 aaPredicted RBP13.89□□□□□ -0.19
SMC6-201ENST00000351948 NCKAP1Q9Y2A7 1128 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 DYRK1BQ9Y463 629 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 UGT2B4P06133 528 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 CCDC166P0CW27 439 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 ALOX15P16050 662 aaPredicted RBP13.89□□□□□ -0.19
SMC6-201ENST00000351948 IL10P22301 178 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 LBX1P52954 281 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 NOMO1Q15155 1222 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 PTPRNQ16849 979 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 PGS1Q32NB8 556 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 APOPT1Q96IL0 206 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 NSL1Q96IY1 281 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 MAGEB10Q96LZ2 347 aaPredicted RBP13.89□□□□□ -0.19
SMC6-201ENST00000351948 ZFP37Q9Y6Q3 630 aaPredicted RBP13.89□□□□□ -0.19
SMC6-201ENST00000351948 PKD1L3Q7Z443 1732 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 TBC1D4O60343 1298 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 THOP1P52888 689 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 COPAP53621 1224 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 NRLP54845 237 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 INSCQ1MX18 579 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 PPP2R2DQ66LE6 453 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 C11orf74Q86VG3 221 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 LRRC57Q8N9N7 239 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 CATSPER2Q96P56 530 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 NMRAL1Q9HBL8 299 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.89□□□□□ -0.19
SMC6-201ENST00000351948 TAF1P21675 1872 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 IRS2Q9Y4H2 1338 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 NR5A2O00482 541 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 SLC1A6P48664 564 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 PFKFB4Q16877 469 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 RARS2Q5T160 578 aaKnown RBP13.88□□□□□ -0.19
SMC6-201ENST00000351948 CDCA2Q69YH5 1023 aaPredicted RBP13.88□□□□□ -0.19
SMC6-201ENST00000351948 RHBDF2Q6PJF5 856 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 PARP9Q8IXQ6 854 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 TRIML2Q8N7C3 387 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 MTFMTQ96DP5 389 aaKnown RBP13.88□□□□□ -0.19
SMC6-201ENST00000351948 PTPN18Q99952 460 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 SLC38A8A6NNN8 435 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 PER2O15055 1255 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 CNMDO75829 334 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 LUC7L3O95232 432 aaKnown RBP13.88□□□□□ -0.19
SMC6-201ENST00000351948 UNGP13051 313 aaPredicted RBP13.88□□□□□ -0.19
SMC6-201ENST00000351948 SEMG2Q02383 582 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 AUHQ13825 339 aaKnown RBP13.88□□□□□ -0.19
SMC6-201ENST00000351948 ZNF662Q6ZS27 426 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 HFE2Q6ZVN8 426 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 FBXL18Q96ME1 805 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 ZMAT2Q96NC0 199 aaKnown RBP13.88□□□□□ -0.19
SMC6-201ENST00000351948 R3HDMLQ9H3Y0 253 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 SEMA4BQ9NPR2 832 aaPredicted RBP13.88□□□□□ -0.19
SMC6-201ENST00000351948 ARL15Q9NXU5 204 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 GLI3P10071 1580 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 CFAP73A6NFT4 308 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 TRIM13O60858 407 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 DSC2Q02487 901 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 TMCO2Q7Z6W1 182 aaPredicted RBP13.88□□□□□ -0.19
SMC6-201ENST00000351948 ZNF280BQ86YH2 543 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 CXorf40AQ8TE69 158 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 CAB39LQ9H9S4 337 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 DNAJB4Q9UDY4 337 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 SIX4Q9UIU6 781 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 EIF3LQ9Y262 564 aaKnown RBP13.88□□□□□ -0.19
SMC6-201ENST00000351948 LTBP4Q8N2S1 1624 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 TM9SF1O15321 606 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 MT-CYBP00156 380 aaPredicted RBP13.88□□□□□ -0.19
SMC6-201ENST00000351948 MPOP05164 745 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 TYMPP19971 482 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 CRY1Q16526 586 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 CACHD1Q5VU97 1274 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 TXNRD3NBQ6F5E7 133 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 TTC27Q6P3X3 843 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 CRELD2Q6UXH1 353 aaPredicted RBP13.88□□□□□ -0.19
SMC6-201ENST00000351948 CMC1Q7Z7K0 106 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 OSTM1Q86WC4 334 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 ART4Q93070 314 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 ECSITQ9BQ95 431 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 POMKQ9H5K3 350 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 KCND1Q9NSA2 647 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms