RNA–Protein interactions for RNA: ENST00000348547.6

ERGIC3-202, Transcript of ERGIC and golgi 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ERGIC3, Length 1,359 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-202ENST00000348547 SIGLEC14Q08ET2 396 aa12.96□□□□□ -0.33
ERGIC3-202ENST00000348547 XRCC4Q13426 336 aa12.96□□□□□ -0.33
ERGIC3-202ENST00000348547 NUMA1Q14980 2115 aa12.96□□□□□ -0.33
ERGIC3-202ENST00000348547 EIF4HQ15056 248 aaKnown RBP12.96□□□□□ -0.33
ERGIC3-202ENST00000348547 PDK1Q15118 436 aa12.96□□□□□ -0.33
ERGIC3-202ENST00000348547 ZNF852Q6ZMS4 543 aa12.96□□□□□ -0.33
ERGIC3-202ENST00000348547 Q6ZVU0 165 aa12.96□□□□□ -0.33
ERGIC3-202ENST00000348547 FATE1Q969F0 183 aa12.96□□□□□ -0.33
ERGIC3-202ENST00000348547 CLDN23Q96B33 292 aa12.96□□□□□ -0.33
ERGIC3-202ENST00000348547 EXOC2Q96KP1 924 aa12.96□□□□□ -0.33
ERGIC3-202ENST00000348547 TMEM121Q9BTD3 319 aa12.96□□□□□ -0.33
ERGIC3-202ENST00000348547 COL25A1Q9BXS0 654 aaPredicted RBP12.96□□□□□ -0.33
ERGIC3-202ENST00000348547 DDX47Q9H0S4 455 aaKnown RBP12.96□□□□□ -0.33
ERGIC3-202ENST00000348547 EPHX3Q9H6B9 360 aa12.96□□□□□ -0.33
ERGIC3-202ENST00000348547 STON1Q9Y6Q2 735 aa12.96□□□□□ -0.33
ERGIC3-202ENST00000348547 BCLAF3A2AJT9 711 aaKnown RBP12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 FAM170BA6NMN3 283 aa12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 KIF2AO00139 706 aaPredicted RBP12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 MATN3O15232 486 aa12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 INSIG1O15503 277 aa12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 MMP2P08253 660 aa12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 ZSCAN5DPP0CG00 497 aa12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 CR2P20023 1033 aa12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 CCNCP24863 283 aa12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 GKP32189 559 aa12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 PTGIRP43119 386 aa12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 VASPP50552 380 aaPredicted RBP12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 METAP1P53582 386 aa12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 NIPAL4Q0D2K0 466 aa12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 AP1B1Q10567 949 aa12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 GRSF1Q12849 480 aaKnown RBP eCLIP12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 UBXN2BQ14CS0 331 aa12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 DLG2Q15700 870 aa12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 CCNG2Q16589 344 aa12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 TMCO4Q5TGY1 634 aa12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 CCDC181Q5TID7 509 aa12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 C22orf39Q6P5X5 142 aa12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 TMEM92Q6UXU6 159 aa12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 SUGP1Q8IWZ8 645 aaKnown RBP12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 CCDC13Q8IYE1 715 aa12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 ZNF557Q8N988 423 aaPredicted RBP12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 FAM71DQ8N9W8 422 aa12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 CHST14Q8NCH0 376 aa12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 CCNYQ8ND76 341 aa12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 OR6K2Q8NGY2 324 aa12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 TFB1MQ8WVM0 346 aaKnown RBP12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 ACDQ96AP0 544 aa12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 RTP4Q96DX8 246 aa12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 SP110Q9HB58 689 aa12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 RRAGDQ9NQL2 400 aaPredicted RBP12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 UBA2Q9UBT2 640 aaPredicted RBP12.95□□□□□ -0.34
ERGIC3-202ENST00000348547 TMEM221A6NGB7 291 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 F5H423 210 aaPredicted RBP12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 H7C0C1 242 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 M0R296 226 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 KRIT1O00522 736 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 MAN2B1O00754 1011 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 PHF2O75151 1096 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 KLF8O95600 359 aaPredicted RBP12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 JCHAINP01591 159 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 DCNP07585 359 aaKnown RBP12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 CTSLP07711 333 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 CCNB1P14635 433 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 MX2P20592 715 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 CETN2P41208 172 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 ATP5OP48047 213 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 MAXP61244 160 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 C2orf54Q08AI8 447 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 BYSLQ13895 437 aaKnown RBP12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 LBRQ14739 615 aaKnown RBP12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 HNRNPA1L2Q32P51 320 aaKnown RBP12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 FNDC3BQ53EP0 1204 aaKnown RBP12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 C9orf64Q5T6V5 341 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 DRICH1Q6PGQ1 229 aaPredicted RBP12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 ZNF354CQ86Y25 554 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 ZNF567Q8N184 647 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 ZNF513Q8N8E2 541 aaPredicted RBP12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 TXNDC5Q8NBS9 432 aaKnown RBP12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 OR2A12Q8NGT7 310 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 RPLP0P6Q8NHW5 317 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 KIF18AQ8NI77 898 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 ARRDC2Q8TBH0 407 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 PTPRN2Q92932 1015 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 ZNF599Q96NL3 588 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 PSKH2Q96QS6 385 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 GABRG3Q99928 467 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 TM6SF2Q9BZW4 377 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 SLC6A17Q9H1V8 727 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 L2HGDHQ9H9P8 463 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 LMAN1LQ9HAT1 526 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 ATP8A1Q9Y2Q0 1164 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 ZNF292O60281 2723 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 LRRK1Q38SD2 2015 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 HACD1B0YJ81 288 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 PPP1R12AO14974 1030 aaPredicted RBP12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 MCF2LO15068 1137 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 NCAM2O15394 837 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 KCNN4O15554 427 aa12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 ZBTB24O43167 697 aaPredicted RBP12.94□□□□□ -0.34
ERGIC3-202ENST00000348547 SIN3BO75182 1162 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms