RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 CEP250Q9BV73 2442 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 DOCK4Q8N1I0 1966 aa16.09■□□□□ 0.17
TSPAN4-201ENST00000346501 SSU72P8A0A1W2PR75 194 aa16.09■□□□□ 0.17
TSPAN4-201ENST00000346501 DCDC2BA2VCK2 349 aa16.09■□□□□ 0.17
TSPAN4-201ENST00000346501 WASH4PA8MWX3 477 aa16.09■□□□□ 0.17
TSPAN4-201ENST00000346501 BUB1O43683 1085 aa16.09■□□□□ 0.17
TSPAN4-201ENST00000346501 OPHN1O60890 802 aa16.09■□□□□ 0.17
TSPAN4-201ENST00000346501 H2AFZP0C0S5 128 aa16.09■□□□□ 0.17
TSPAN4-201ENST00000346501 CD27P26842 260 aa16.09■□□□□ 0.17
TSPAN4-201ENST00000346501 ACVRL1P37023 503 aa16.09■□□□□ 0.17
TSPAN4-201ENST00000346501 AFF3P51826 1226 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-201ENST00000346501 GALCP54803 685 aa16.09■□□□□ 0.17
TSPAN4-201ENST00000346501 SNRPD1P62314 119 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-201ENST00000346501 SLC18A3Q16572 532 aa16.09■□□□□ 0.17
TSPAN4-201ENST00000346501 HADHQ16836 314 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-201ENST00000346501 SLC45A4Q5BKX6 768 aa16.09■□□□□ 0.17
TSPAN4-201ENST00000346501 CARD16Q5EG05 197 aa16.09■□□□□ 0.17
TSPAN4-201ENST00000346501 PPP6R3Q5H9R7 873 aaPredicted RBP16.09■□□□□ 0.17
TSPAN4-201ENST00000346501 NCEH1Q6PIU2 408 aa16.09■□□□□ 0.17
TSPAN4-201ENST00000346501 H2AFVQ71UI9 128 aa16.09■□□□□ 0.17
TSPAN4-201ENST00000346501 ISG20Q96AZ6 181 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-201ENST00000346501 BIRC7Q96CA5 298 aa16.09■□□□□ 0.17
TSPAN4-201ENST00000346501 DNAJC7Q99615 494 aa16.09■□□□□ 0.17
TSPAN4-201ENST00000346501 HEPHQ9BQS7 1158 aa16.09■□□□□ 0.17
TSPAN4-201ENST00000346501 SNRNP25Q9BV90 132 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-201ENST00000346501 TNKS2Q9H2K2 1166 aa16.09■□□□□ 0.17
TSPAN4-201ENST00000346501 RXFP3Q9NSD7 469 aa16.09■□□□□ 0.17
TSPAN4-201ENST00000346501 CTTNBP2NLQ9P2B4 639 aa16.09■□□□□ 0.17
TSPAN4-201ENST00000346501 PPM1HQ9ULR3 514 aa16.09■□□□□ 0.17
TSPAN4-201ENST00000346501 DMDP11532 3685 aa16.09■□□□□ 0.17
TSPAN4-201ENST00000346501 SPTBN4Q9H254 2564 aa16.08■□□□□ 0.17
TSPAN4-201ENST00000346501 ARHGAP42A6NI28 874 aa16.08■□□□□ 0.16
TSPAN4-201ENST00000346501 AKR1B15C9JRZ8 316 aaPredicted RBP16.08■□□□□ 0.16
TSPAN4-201ENST00000346501 H3BRJ5 948 aa16.08■□□□□ 0.16
TSPAN4-201ENST00000346501 K7ERQ8 282 aa16.08■□□□□ 0.16
TSPAN4-201ENST00000346501 KDELR3O43731 214 aa16.08■□□□□ 0.16
TSPAN4-201ENST00000346501 LRCH4O75427 683 aa16.08■□□□□ 0.16
TSPAN4-201ENST00000346501 ZMPSTE24O75844 475 aa16.08■□□□□ 0.16
TSPAN4-201ENST00000346501 CYP1A2P05177 515 aa16.08■□□□□ 0.16
TSPAN4-201ENST00000346501 GLDCP23378 1020 aa16.08■□□□□ 0.16
TSPAN4-201ENST00000346501 NUDT1P36639 197 aa16.08■□□□□ 0.16
TSPAN4-201ENST00000346501 NDST2P52849 883 aa16.08■□□□□ 0.16
TSPAN4-201ENST00000346501 SARM1Q6SZW1 724 aa16.08■□□□□ 0.16
TSPAN4-201ENST00000346501 PRPF39Q86UA1 669 aaKnown RBP16.08■□□□□ 0.16
TSPAN4-201ENST00000346501 UMODL1-AS1Q8N2C9 162 aa16.08■□□□□ 0.16
TSPAN4-201ENST00000346501 AADATQ8N5Z0 425 aa16.08■□□□□ 0.16
TSPAN4-201ENST00000346501 OR2A12Q8NGT7 310 aa16.08■□□□□ 0.16
TSPAN4-201ENST00000346501 SLC32A1Q9H598 525 aa16.08■□□□□ 0.16
TSPAN4-201ENST00000346501 CAPN10Q9HC96 672 aa16.08■□□□□ 0.16
TSPAN4-201ENST00000346501 OSGEPQ9NPF4 335 aa16.08■□□□□ 0.16
TSPAN4-201ENST00000346501 ABHD10Q9NUJ1 306 aa16.08■□□□□ 0.16
TSPAN4-201ENST00000346501 NDFIP2Q9NV92 336 aa16.08■□□□□ 0.16
TSPAN4-201ENST00000346501 GPATCH2LQ9NWQ4 482 aa16.08■□□□□ 0.16
TSPAN4-201ENST00000346501 UVRAGQ9P2Y5 699 aa16.08■□□□□ 0.16
TSPAN4-201ENST00000346501 PI4KAP42356 2102 aa16.07■□□□□ 0.16
TSPAN4-201ENST00000346501 RASA4BC9J798 803 aa16.07■□□□□ 0.16
TSPAN4-201ENST00000346501 RASA4O43374 803 aa16.07■□□□□ 0.16
TSPAN4-201ENST00000346501 SMAD6O43541 496 aaKnown RBP16.07■□□□□ 0.16
TSPAN4-201ENST00000346501 MFAP3LO75121 409 aa16.07■□□□□ 0.16
TSPAN4-201ENST00000346501 CER1O95813 267 aa16.07■□□□□ 0.16
TSPAN4-201ENST00000346501 HCAR3P49019 387 aa16.07■□□□□ 0.16
TSPAN4-201ENST00000346501 CCR5P51681 352 aa16.07■□□□□ 0.16
TSPAN4-201ENST00000346501 ADPRHP54922 357 aa16.07■□□□□ 0.16
TSPAN4-201ENST00000346501 C21orf59P57076 290 aa16.07■□□□□ 0.16
TSPAN4-201ENST00000346501 ARF5P84085 180 aa16.07■□□□□ 0.16
TSPAN4-201ENST00000346501 SEMA3BQ13214 749 aa16.07■□□□□ 0.16
TSPAN4-201ENST00000346501 MAPK8IP2Q13387 824 aaPredicted RBP16.07■□□□□ 0.16
TSPAN4-201ENST00000346501 POM121L1PQ3SYA9 428 aa16.07■□□□□ 0.16
TSPAN4-201ENST00000346501 DPY19L3Q6ZPD9 716 aa16.07■□□□□ 0.16
TSPAN4-201ENST00000346501 RFX8Q6ZV50 586 aa16.07■□□□□ 0.16
TSPAN4-201ENST00000346501 PLPP6Q8IY26 295 aa16.07■□□□□ 0.16
TSPAN4-201ENST00000346501 MINDY1Q8N5J2 469 aa16.07■□□□□ 0.16
TSPAN4-201ENST00000346501 LZTR1Q8N653 840 aa16.07■□□□□ 0.16
TSPAN4-201ENST00000346501 ZNF564Q8TBZ8 553 aaPredicted RBP16.07■□□□□ 0.16
TSPAN4-201ENST00000346501 GRIN3AQ8TCU5 1115 aa16.07■□□□□ 0.16
TSPAN4-201ENST00000346501 LRIG1Q96JA1 1093 aa16.07■□□□□ 0.16
TSPAN4-201ENST00000346501 MAGEB5Q9BZ81 275 aa16.07■□□□□ 0.16
TSPAN4-201ENST00000346501 TRIM7Q9C029 511 aa16.07■□□□□ 0.16
TSPAN4-201ENST00000346501 SERGEFQ9UGK8 458 aa16.07■□□□□ 0.16
TSPAN4-201ENST00000346501 FCF1Q9Y324 198 aaKnown RBP16.07■□□□□ 0.16
TSPAN4-201ENST00000346501 A0A1W2PPC4 97 aa16.06■□□□□ 0.16
TSPAN4-201ENST00000346501 POP4O95707 220 aaKnown RBP16.06■□□□□ 0.16
TSPAN4-201ENST00000346501 IGSF6O95976 241 aa16.06■□□□□ 0.16
TSPAN4-201ENST00000346501 GRIA4P48058 902 aa16.06■□□□□ 0.16
TSPAN4-201ENST00000346501 CCNHP51946 323 aaPredicted RBP16.06■□□□□ 0.16
TSPAN4-201ENST00000346501 ADKP55263 362 aaKnown RBP16.06■□□□□ 0.16
TSPAN4-201ENST00000346501 RHOAP61586 193 aa16.06■□□□□ 0.16
TSPAN4-201ENST00000346501 RACK1P63244 317 aaKnown RBP16.06■□□□□ 0.16
TSPAN4-201ENST00000346501 ZNF252P-AS1Q0IIN9 211 aa16.06■□□□□ 0.16
TSPAN4-201ENST00000346501 INO80DQ53TQ3 878 aaPredicted RBP16.06■□□□□ 0.16
TSPAN4-201ENST00000346501 ARSIQ5FYB1 569 aa16.06■□□□□ 0.16
TSPAN4-201ENST00000346501 PPM1JQ5JR12 505 aa16.06■□□□□ 0.16
TSPAN4-201ENST00000346501 ZFYVE27Q5T4F4 411 aa16.06■□□□□ 0.16
TSPAN4-201ENST00000346501 FBXL19Q6PCT2 694 aa16.06■□□□□ 0.16
TSPAN4-201ENST00000346501 NIPA2Q8N8Q9 360 aa16.06■□□□□ 0.16
TSPAN4-201ENST00000346501 OR2AP1Q8NGE2 309 aa16.06■□□□□ 0.16
TSPAN4-201ENST00000346501 TEKT4Q8WW24 435 aa16.06■□□□□ 0.16
TSPAN4-201ENST00000346501 HSPH1Q92598 858 aa16.06■□□□□ 0.16
TSPAN4-201ENST00000346501 GDAP1L1Q96MZ0 367 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms