RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 HOXD9P28356 352 aaPredicted RBP21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 MSH2P43246 934 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 CDH17Q12864 832 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 MPP3Q13368 585 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 OLIG2Q13516 323 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 TMED2Q15363 201 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 TEAD2Q15562 447 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 BBS5Q8N3I7 341 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 ARNTL2Q8WYA1 636 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 TCEAL4Q96EI5 215 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 IMP4Q96G21 291 aaKnown RBP21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 PAFAH2Q99487 392 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 SPON2Q9BUD6 331 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 PLAC1Q9HBJ0 212 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 PIH1D1Q9NWS0 290 aaKnown RBP21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 PSD3Q9NYI0 1048 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 MSRAQ9UJ68 235 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 A6NNZ2 444 aa21.83■■□□□ 1.08
TSPAN3-202ENST00000346495 H0Y626 953 aa21.83■■□□□ 1.08
TSPAN3-202ENST00000346495 SCAMP3O14828 347 aaKnown RBP21.83■■□□□ 1.08
TSPAN3-202ENST00000346495 MT-CYBP00156 380 aaPredicted RBP21.83■■□□□ 1.08
TSPAN3-202ENST00000346495 PRKCHP24723 683 aa21.83■■□□□ 1.08
TSPAN3-202ENST00000346495 AVPR1AP37288 418 aa21.83■■□□□ 1.08
TSPAN3-202ENST00000346495 ATP1A2P50993 1020 aa21.83■■□□□ 1.08
TSPAN3-202ENST00000346495 ITKQ08881 620 aa21.83■■□□□ 1.08
TSPAN3-202ENST00000346495 EFTUD2Q15029 972 aaKnown RBP eCLIP21.83■■□□□ 1.082e-8■■■■■ 32.1
TSPAN3-202ENST00000346495 RAB30Q15771 203 aa21.83■■□□□ 1.08
TSPAN3-202ENST00000346495 TUBB8Q3ZCM7 444 aa21.83■■□□□ 1.08
TSPAN3-202ENST00000346495 CXorf57Q6NSI4 855 aaKnown RBP21.83■■□□□ 1.08
TSPAN3-202ENST00000346495 CYS1Q717R9 158 aa21.83■■□□□ 1.08
TSPAN3-202ENST00000346495 RBM23Q86U06 439 aaKnown RBP21.83■■□□□ 1.08
TSPAN3-202ENST00000346495 EXOC3L1Q86VI1 746 aa21.83■■□□□ 1.08
TSPAN3-202ENST00000346495 CMTM8Q8IZV2 173 aa21.83■■□□□ 1.08
TSPAN3-202ENST00000346495 CARNMT1Q8N4J0 409 aa21.83■■□□□ 1.08
TSPAN3-202ENST00000346495 TTC16Q8NEE8 873 aa21.83■■□□□ 1.08
TSPAN3-202ENST00000346495 IPMKQ8NFU5 416 aa21.83■■□□□ 1.08
TSPAN3-202ENST00000346495 ACE2Q9BYF1 805 aaPredicted RBP21.83■■□□□ 1.08
TSPAN3-202ENST00000346495 PBX4Q9BYU1 374 aa21.83■■□□□ 1.08
TSPAN3-202ENST00000346495 CNOT10Q9H9A5 744 aaKnown RBP21.83■■□□□ 1.08
TSPAN3-202ENST00000346495 CERS4Q9HA82 394 aa21.83■■□□□ 1.08
TSPAN3-202ENST00000346495 ATP13A1Q9HD20 1204 aa21.83■■□□□ 1.08
TSPAN3-202ENST00000346495 VPS45Q9NRW7 570 aa21.83■■□□□ 1.08
TSPAN3-202ENST00000346495 ZMYM5Q9UJ78 669 aa21.83■■□□□ 1.08
TSPAN3-202ENST00000346495 ATG2AQ2TAZ0 1938 aa21.82■■□□□ 1.08
TSPAN3-202ENST00000346495 CCDC195A0A1B0GUA6 201 aa21.82■■□□□ 1.08
TSPAN3-202ENST00000346495 E2F8A0AVK6 867 aa21.82■■□□□ 1.08
TSPAN3-202ENST00000346495 CCDC85CA6NKD9 419 aa21.82■■□□□ 1.08
TSPAN3-202ENST00000346495 ZNF197O14709 1029 aa21.82■■□□□ 1.08
TSPAN3-202ENST00000346495 LUC7L3O95232 432 aaKnown RBP21.82■■□□□ 1.08
TSPAN3-202ENST00000346495 CRADDP78560 199 aa21.82■■□□□ 1.08
TSPAN3-202ENST00000346495 ZNF235Q14590 738 aa21.82■■□□□ 1.08
TSPAN3-202ENST00000346495 RFTN1Q14699 578 aaPredicted RBP21.82■■□□□ 1.08
TSPAN3-202ENST00000346495 TERF2Q15554 542 aa21.82■■□□□ 1.08
TSPAN3-202ENST00000346495 KBTBD12Q3ZCT8 623 aa21.82■■□□□ 1.08
TSPAN3-202ENST00000346495 RNF219Q5W0B1 726 aaPredicted RBP21.82■■□□□ 1.08
TSPAN3-202ENST00000346495 ADGRD1Q6QNK2 874 aa21.82■■□□□ 1.08
TSPAN3-202ENST00000346495 ADGRD2Q7Z7M1 963 aa21.82■■□□□ 1.08
TSPAN3-202ENST00000346495 BBS7Q8IWZ6 715 aa21.82■■□□□ 1.08
TSPAN3-202ENST00000346495 CYP4X1Q8N118 509 aa21.82■■□□□ 1.08
TSPAN3-202ENST00000346495 SH3RF2Q8TEC5 729 aa21.82■■□□□ 1.08
TSPAN3-202ENST00000346495 APOL2Q9BQE5 337 aa21.82■■□□□ 1.08
TSPAN3-202ENST00000346495 IL22Q9GZX6 179 aa21.82■■□□□ 1.08
TSPAN3-202ENST00000346495 NKX2-4Q9H2Z4 354 aa21.82■■□□□ 1.08
TSPAN3-202ENST00000346495 NOTCH4Q99466 2003 aa21.82■■□□□ 1.08
TSPAN3-202ENST00000346495 MAGEB16A2A368 324 aa21.81■■□□□ 1.08
TSPAN3-202ENST00000346495 POLBP06746 335 aa21.81■■□□□ 1.08
TSPAN3-202ENST00000346495 ADRA1AP35348 466 aa21.81■■□□□ 1.08
TSPAN3-202ENST00000346495 MPPE1Q53F39 396 aa21.81■■□□□ 1.08
TSPAN3-202ENST00000346495 PRSS36Q5K4E3 855 aa21.81■■□□□ 1.08
TSPAN3-202ENST00000346495 PRPF39Q86UA1 669 aaKnown RBP21.81■■□□□ 1.08
TSPAN3-202ENST00000346495 TDRD5Q8NAT2 981 aaKnown RBP21.81■■□□□ 1.08
TSPAN3-202ENST00000346495 MRRFQ96E11 262 aaKnown RBP21.81■■□□□ 1.08
TSPAN3-202ENST00000346495 FICDQ9BVA6 458 aa21.81■■□□□ 1.08
TSPAN3-202ENST00000346495 FSD1LQ9BXM9 530 aa21.81■■□□□ 1.08
TSPAN3-202ENST00000346495 POLR1EQ9GZS1 481 aaKnown RBP21.81■■□□□ 1.08
TSPAN3-202ENST00000346495 MUC3BQ9H195 1237 aa21.81■■□□□ 1.08
TSPAN3-202ENST00000346495 TLE6Q9H808 572 aa21.81■■□□□ 1.08
TSPAN3-202ENST00000346495 UBA2Q9UBT2 640 aaPredicted RBP21.81■■□□□ 1.08
TSPAN3-202ENST00000346495 ACTL7BQ9Y614 415 aa21.81■■□□□ 1.08
TSPAN3-202ENST00000346495 IKBKGQ9Y6K9 419 aa21.81■■□□□ 1.08
TSPAN3-202ENST00000346495 DOCK6Q96HP0 2047 aa21.81■■□□□ 1.08
TSPAN3-202ENST00000346495 PMPCBO75439 489 aa21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 C1QAP02745 245 aa21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 MAXP61244 160 aa21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 DUSP6Q16828 381 aa21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 SLC5A9Q2M3M2 681 aa21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 SPANXN3Q5MJ09 141 aa21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 MPP7Q5T2T1 576 aa21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 ZNF697Q5TEC3 545 aa21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 PPP2R2DQ66LE6 453 aa21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 KDELC1Q6UW63 502 aa21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 LEKR1Q6ZMV7 388 aa21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 GRASPQ7Z6J2 395 aaPredicted RBP21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 PGBD5Q8N414 524 aa21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 DCAKDQ8WVC6 231 aa21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 SLC44A1Q8WWI5 657 aa21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 ZNF707Q96C28 371 aaPredicted RBP21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 SMG9Q9H0W8 520 aaKnown RBP21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 SEPT3Q9UH03 358 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms