RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 LMNAP02545 664 aaKnown RBP19.66■□□□□ 0.74
COL9A3-201ENST00000343916 AHSGP02765 367 aa19.66■□□□□ 0.74
COL9A3-201ENST00000343916 HLA-DQB2P05538 268 aa19.66■□□□□ 0.74
COL9A3-201ENST00000343916 SLC10A3P09131 477 aa19.66■□□□□ 0.74
COL9A3-201ENST00000343916 CDK7P50613 346 aa19.66■□□□□ 0.74
COL9A3-201ENST00000343916 CSE1LP55060 971 aaKnown RBP19.66■□□□□ 0.74
COL9A3-201ENST00000343916 ZNF460Q14592 562 aa19.66■□□□□ 0.74
COL9A3-201ENST00000343916 BRMS1LQ5PSV4 323 aa19.66■□□□□ 0.74
COL9A3-201ENST00000343916 DENND5AQ6IQ26 1287 aa19.66■□□□□ 0.74
COL9A3-201ENST00000343916 ESRP1Q6NXG1 681 aaKnown RBP19.66■□□□□ 0.74
COL9A3-201ENST00000343916 SCUBE1Q8IWY4 988 aa19.66■□□□□ 0.74
COL9A3-201ENST00000343916 OSBPL1AQ9BXW6 950 aa19.66■□□□□ 0.74
COL9A3-201ENST00000343916 UNKQ9C0B0 810 aaKnown RBP19.66■□□□□ 0.74
COL9A3-201ENST00000343916 GLOD4Q9HC38 313 aa19.66■□□□□ 0.74
COL9A3-201ENST00000343916 HS3ST4Q9Y661 456 aa19.66■□□□□ 0.74
COL9A3-201ENST00000343916 MAGEC1O60732 1142 aa19.66■□□□□ 0.74
COL9A3-201ENST00000343916 CYP2C18P33260 490 aa19.66■□□□□ 0.74
COL9A3-201ENST00000343916 CCR10P46092 362 aa19.66■□□□□ 0.74
COL9A3-201ENST00000343916 FCGRTP55899 365 aa19.66■□□□□ 0.74
COL9A3-201ENST00000343916 MPP1Q00013 466 aa19.66■□□□□ 0.74
COL9A3-201ENST00000343916 SLC25A3Q00325 362 aa19.66■□□□□ 0.74
COL9A3-201ENST00000343916 USP10Q14694 798 aaKnown RBP19.66■□□□□ 0.74
COL9A3-201ENST00000343916 DDR2Q16832 855 aa19.66■□□□□ 0.74
COL9A3-201ENST00000343916 PDPK2PQ6A1A2 396 aa19.66■□□□□ 0.74
COL9A3-201ENST00000343916 SPNS2Q8IVW8 549 aa19.66■□□□□ 0.74
COL9A3-201ENST00000343916 ULK2Q8IYT8 1036 aa19.66■□□□□ 0.74
COL9A3-201ENST00000343916 ARHGAP24Q8N264 748 aa19.66■□□□□ 0.74
COL9A3-201ENST00000343916 NRG4Q8WWG1 115 aa19.66■□□□□ 0.74
COL9A3-201ENST00000343916 IL12RB2Q99665 862 aa19.66■□□□□ 0.74
COL9A3-201ENST00000343916 TASP1Q9H6P5 420 aa19.66■□□□□ 0.74
COL9A3-201ENST00000343916 CATSPERBQ9H7T0 1116 aa19.66■□□□□ 0.74
COL9A3-201ENST00000343916 COG4Q9H9E3 785 aa19.66■□□□□ 0.74
COL9A3-201ENST00000343916 RBM22Q9NW64 420 aaKnown RBP eCLIP19.66■□□□□ 0.741e-6■■■■□ 22.3
COL9A3-201ENST00000343916 PCDHB12Q9Y5F1 795 aa19.66■□□□□ 0.74
COL9A3-201ENST00000343916 E9PAM4 449 aa19.65■□□□□ 0.74
COL9A3-201ENST00000343916 MATN3O15232 486 aa19.65■□□□□ 0.74
COL9A3-201ENST00000343916 ELNP15502 786 aa19.65■□□□□ 0.74
COL9A3-201ENST00000343916 NCF2P19878 526 aaPredicted RBP19.65■□□□□ 0.74
COL9A3-201ENST00000343916 CHRNA4P43681 627 aa19.65■□□□□ 0.74
COL9A3-201ENST00000343916 RAP1GDS1P52306 607 aa19.65■□□□□ 0.74
COL9A3-201ENST00000343916 TBCCQ15814 346 aa19.65■□□□□ 0.74
COL9A3-201ENST00000343916 PKN3Q6P5Z2 889 aa19.65■□□□□ 0.74
COL9A3-201ENST00000343916 ZNF598Q86UK7 904 aaKnown RBP19.65■□□□□ 0.74
COL9A3-201ENST00000343916 SPATA6LQ8N4H0 392 aa19.65■□□□□ 0.74
COL9A3-201ENST00000343916 STMN2Q93045 179 aa19.65■□□□□ 0.74
COL9A3-201ENST00000343916 FCRL5Q96RD9 977 aa19.65■□□□□ 0.74
COL9A3-201ENST00000343916 GPR22Q99680 433 aa19.65■□□□□ 0.74
COL9A3-201ENST00000343916 TRIM62Q9BVG3 475 aa19.65■□□□□ 0.74
COL9A3-201ENST00000343916 DNAJC28Q9NX36 388 aa19.65■□□□□ 0.74
COL9A3-201ENST00000343916 SLC7A8Q9UHI5 535 aa19.65■□□□□ 0.74
COL9A3-201ENST00000343916 LRRC42Q9Y546 428 aa19.65■□□□□ 0.74
COL9A3-201ENST00000343916 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.65■□□□□ 0.74
COL9A3-201ENST00000343916 NYNRINQ9P2P1 1898 aaKnown RBP19.65■□□□□ 0.74
COL9A3-201ENST00000343916 TM7SF2O76062 418 aa19.65■□□□□ 0.74
COL9A3-201ENST00000343916 LUC7L3O95232 432 aaKnown RBP19.65■□□□□ 0.74
COL9A3-201ENST00000343916 ATP5BP06576 529 aaKnown RBP19.65■□□□□ 0.74
COL9A3-201ENST00000343916 CHRNGP07510 517 aa19.65■□□□□ 0.74
COL9A3-201ENST00000343916 ARNTP27540 789 aa19.65■□□□□ 0.74
COL9A3-201ENST00000343916 HOXC13P31276 330 aa19.65■□□□□ 0.74
COL9A3-201ENST00000343916 CPOXP36551 454 aa19.65■□□□□ 0.74
COL9A3-201ENST00000343916 ZNF33AQ06730 810 aa19.65■□□□□ 0.74
COL9A3-201ENST00000343916 ANO4Q32M45 955 aa19.65■□□□□ 0.74
COL9A3-201ENST00000343916 NOMO2Q5JPE7 1267 aa19.65■□□□□ 0.74
COL9A3-201ENST00000343916 PCID2Q5JVF3 399 aa19.65■□□□□ 0.74
COL9A3-201ENST00000343916 SLC41A1Q8IVJ1 513 aa19.65■□□□□ 0.74
COL9A3-201ENST00000343916 MAPK15Q8TD08 544 aa19.65■□□□□ 0.74
COL9A3-201ENST00000343916 GPR152Q8TDT2 470 aa19.65■□□□□ 0.74
COL9A3-201ENST00000343916 PPP1R36Q96LQ0 422 aa19.65■□□□□ 0.74
COL9A3-201ENST00000343916 STN1Q9H668 368 aaKnown RBP19.65■□□□□ 0.74
COL9A3-201ENST00000343916 GRK4P32298 578 aa19.64■□□□□ 0.74
COL9A3-201ENST00000343916 PAPOLAP51003 745 aaKnown RBP19.64■□□□□ 0.74
COL9A3-201ENST00000343916 INHBEP58166 350 aa19.64■□□□□ 0.74
COL9A3-201ENST00000343916 PEX6Q13608 980 aa19.64■□□□□ 0.74
COL9A3-201ENST00000343916 PCSK7Q16549 785 aa19.64■□□□□ 0.74
COL9A3-201ENST00000343916 SLC9B1Q4ZJI4 515 aa19.64■□□□□ 0.74
COL9A3-201ENST00000343916 BEND5Q7L4P6 421 aa19.64■□□□□ 0.74
COL9A3-201ENST00000343916 TFAP2DQ7Z6R9 452 aa19.64■□□□□ 0.74
COL9A3-201ENST00000343916 RTN4RL1Q86UN2 441 aaPredicted RBP19.64■□□□□ 0.74
COL9A3-201ENST00000343916 PHTF2Q8N3S3 785 aa19.64■□□□□ 0.74
COL9A3-201ENST00000343916 SLC25A41Q8N5S1 370 aa19.64■□□□□ 0.74
COL9A3-201ENST00000343916 KCTD4Q8WVF5 259 aa19.64■□□□□ 0.74
COL9A3-201ENST00000343916 PANX3Q96QZ0 392 aa19.64■□□□□ 0.74
COL9A3-201ENST00000343916 GATA5Q9BWX5 397 aaPredicted RBP19.64■□□□□ 0.74
COL9A3-201ENST00000343916 FSD1LQ9BXM9 530 aa19.64■□□□□ 0.74
COL9A3-201ENST00000343916 ACE2Q9BYF1 805 aaPredicted RBP19.64■□□□□ 0.74
COL9A3-201ENST00000343916 RHOJQ9H4E5 214 aa19.64■□□□□ 0.74
COL9A3-201ENST00000343916 STOML1Q9UBI4 398 aa19.64■□□□□ 0.74
COL9A3-201ENST00000343916 TLK1Q9UKI8 766 aa19.64■□□□□ 0.74
COL9A3-201ENST00000343916 CORO1CQ9ULV4 474 aaPredicted RBP19.64■□□□□ 0.74
COL9A3-201ENST00000343916 PRG3Q9Y2Y8 225 aaPredicted RBP19.64■□□□□ 0.74
COL9A3-201ENST00000343916 WASF2Q9Y6W5 498 aa19.64■□□□□ 0.74
COL9A3-201ENST00000343916 MYLKQ15746 1914 aa19.64■□□□□ 0.73
COL9A3-201ENST00000343916 FAM155AB1AL88 458 aaPredicted RBP19.64■□□□□ 0.73
COL9A3-201ENST00000343916 E9PBE3 544 aa19.64■□□□□ 0.73
COL9A3-201ENST00000343916 FGF10O15520 208 aaPredicted RBP19.64■□□□□ 0.73
COL9A3-201ENST00000343916 KLHL41O60662 606 aa19.64■□□□□ 0.73
COL9A3-201ENST00000343916 TRIM13O60858 407 aa19.64■□□□□ 0.73
COL9A3-201ENST00000343916 ANXA9O76027 345 aa19.64■□□□□ 0.73
COL9A3-201ENST00000343916 PDHA1P08559 390 aa19.64■□□□□ 0.73
COL9A3-201ENST00000343916 SBK3P0C264 359 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms