RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 NEK3P51956 506 aa8.18□□□□□ -1.1
UBE4B-202ENST00000343090 SLC1A5Q15758 541 aa8.18□□□□□ -1.1
UBE4B-202ENST00000343090 FNBP1LQ5T0N5 605 aa8.18□□□□□ -1.1
UBE4B-202ENST00000343090 ZNF280DQ6N043 979 aa8.18□□□□□ -1.1
UBE4B-202ENST00000343090 CMC1Q7Z7K0 106 aa8.18□□□□□ -1.1
UBE4B-202ENST00000343090 RAB42Q8N4Z0 105 aa8.18□□□□□ -1.1
UBE4B-202ENST00000343090 KCTD4Q8WVF5 259 aa8.18□□□□□ -1.1
UBE4B-202ENST00000343090 NDRG1Q92597 394 aaKnown RBP8.18□□□□□ -1.1
UBE4B-202ENST00000343090 HPS1Q92902 700 aa8.18□□□□□ -1.1
UBE4B-202ENST00000343090 GLMNQ92990 594 aa8.18□□□□□ -1.1
UBE4B-202ENST00000343090 LRRC39Q96DD0 335 aa8.18□□□□□ -1.1
UBE4B-202ENST00000343090 OTUB1Q96FW1 271 aaPredicted RBP8.18□□□□□ -1.1
UBE4B-202ENST00000343090 MTFR1LQ9H019 292 aa8.18□□□□□ -1.1
UBE4B-202ENST00000343090 ABHD16BQ9H3Z7 469 aa8.18□□□□□ -1.1
UBE4B-202ENST00000343090 ACTR8Q9H981 624 aa8.18□□□□□ -1.1
UBE4B-202ENST00000343090 CAPN10Q9HC96 672 aa8.18□□□□□ -1.1
UBE4B-202ENST00000343090 ATP13A1Q9HD20 1204 aa8.18□□□□□ -1.1
UBE4B-202ENST00000343090 RPTORQ8N122 1335 aa8.18□□□□□ -1.1
UBE4B-202ENST00000343090 CAPN8A6NHC0 703 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 PCNAP12004 261 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 FASP25445 335 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 CDC16Q13042 620 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 TRIM25Q14258 630 aaKnown RBP8.17□□□□□ -1.1
UBE4B-202ENST00000343090 ANKS3Q6ZW76 656 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 DEFB128Q7Z7B8 93 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 BORCS5Q969J3 196 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 RNF145Q96MT1 663 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 ROGDIQ9GZN7 287 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 WDR41Q9HAD4 459 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 TLR8Q9NR97 1041 aaKnown RBP8.17□□□□□ -1.1
UBE4B-202ENST00000343090 IMPAD1Q9NX62 359 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 ITM2BQ9Y287 266 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 IGLV3-22A0A075B6J6 115 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 A0A087WXM4 84 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 DEFA1P59665 94 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 DEFA3P59666 94 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 XIAPP98170 497 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 THOC7Q6I9Y2 204 aaKnown RBP8.17□□□□□ -1.1
UBE4B-202ENST00000343090 NEPROQ6NW34 567 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 C10orf107Q8IVU9 208 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 EBNA1BP2Q99848 306 aaKnown RBP8.17□□□□□ -1.1
UBE4B-202ENST00000343090 TMEM109Q9BVC6 243 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 ADGRE3Q9BY15 652 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 PNPOQ9NVS9 261 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 ANKRD6Q9Y2G4 727 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 PCDHB5Q9Y5E4 795 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 IFT172Q9UG01 1749 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 H7C4K7 107 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 NKRFO15226 690 aaKnown RBP eCLIP8.17□□□□□ -1.1
UBE4B-202ENST00000343090 CD48P09326 243 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 EPB42P16452 691 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 NPR3P17342 541 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 CD86P42081 329 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 GRIA4P48058 902 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 CLK2P49760 499 aaKnown RBP8.17□□□□□ -1.1
UBE4B-202ENST00000343090 CTBP1Q13363 440 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 PFKFB4Q16877 469 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 EGFLAMQ63HQ2 1017 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 UTS2BQ765I0 119 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 GLT6D1Q7Z4J2 308 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 FAM120BQ96EK7 910 aaKnown RBP8.17□□□□□ -1.1
UBE4B-202ENST00000343090 TRIM17Q9Y577 477 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 GNG14A0A1W2PPG7 69 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 ABCB1P08183 1280 aaPredicted RBP8.17□□□□□ -1.1
UBE4B-202ENST00000343090 PIRTP0C851 137 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 EPHA3P29320 983 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 MSX2P35548 267 aaPredicted RBP8.17□□□□□ -1.1
UBE4B-202ENST00000343090 NFE2Q16621 373 aaPredicted RBP8.17□□□□□ -1.1
UBE4B-202ENST00000343090 HSDL1Q3SXM5 330 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 SDHAF4Q5VUM1 108 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 ABHD15Q6UXT9 468 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 BNIPLQ7Z465 357 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 AMIGO2Q86SJ2 522 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 NT5DC4Q86YG4 428 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 ZCCHC7Q8N3Z6 543 aaKnown RBP8.17□□□□□ -1.1
UBE4B-202ENST00000343090 TRPM4Q8TD43 1214 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 MTFMTQ96DP5 389 aaKnown RBP8.17□□□□□ -1.1
UBE4B-202ENST00000343090 HSPBAP1Q96EW2 488 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 PLEKHA8Q96JA3 519 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 ELOVL6Q9H5J4 265 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 COQ6Q9Y2Z9 468 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 KIF1AQ12756 1690 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 BCL9LQ86UU0 1499 aa8.17□□□□□ -1.1
UBE4B-202ENST00000343090 NID2Q14112 1375 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 CCDC154A6NI56 674 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 F8W810 466 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 SYNCRIPO60506 623 aaKnown RBP8.16□□□□□ -1.1
UBE4B-202ENST00000343090 MFN2O95140 757 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 STAU1O95793 577 aaKnown RBP8.16□□□□□ -1.1
UBE4B-202ENST00000343090 COX4I1P13073 169 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 CHRNB2P17787 502 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 MMP8P22894 467 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 LRPAP1P30533 357 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 CHI3L1P36222 383 aaPredicted RBP8.16□□□□□ -1.1
UBE4B-202ENST00000343090 AQP4P55087 323 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 EMC10Q5UCC4 262 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 ANKRD22Q5VYY1 191 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 C12orf56Q8IXR9 622 aa8.16□□□□□ -1.1
UBE4B-202ENST00000343090 RBM15BQ8NDT2 890 aaKnown RBP8.16□□□□□ -1.1
UBE4B-202ENST00000343090 METTL6Q8TCB7 284 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms