RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 IER2Q9BTL4 223 aa13.46□□□□□ -0.25
TUBD1-202ENST00000340993 CEP41Q9BYV8 373 aa13.46□□□□□ -0.25
TUBD1-202ENST00000340993 ZDHHC6Q9H6R6 413 aa13.46□□□□□ -0.25
TUBD1-202ENST00000340993 CD248Q9HCU0 757 aa13.46□□□□□ -0.25
TUBD1-202ENST00000340993 SEPT10Q9P0V9 454 aa13.46□□□□□ -0.25
TUBD1-202ENST00000340993 UBA2Q9UBT2 640 aaPredicted RBP13.46□□□□□ -0.25
TUBD1-202ENST00000340993 IPO11Q9UI26 975 aaKnown RBP13.46□□□□□ -0.25
TUBD1-202ENST00000340993 FANCMQ8IYD8 2048 aa13.46□□□□□ -0.26
TUBD1-202ENST00000340993 GPR179Q6PRD1 2367 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 PRR23AA6NEV1 266 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 ENC1O14682 589 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 MID1O15344 667 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 CST8O60676 142 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 PYGMP11217 842 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 ACADMP11310 421 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 PECAM1P16284 738 aaPredicted RBP13.45□□□□□ -0.26
TUBD1-202ENST00000340993 BCKDHBP21953 392 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 SERPINB6P35237 376 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 RHOAP61586 193 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 ENPP2Q13822 863 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 HSF5Q4G112 596 aaPredicted RBP13.45□□□□□ -0.26
TUBD1-202ENST00000340993 CCDC181Q5TID7 509 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 DPY19L3Q6ZPD9 716 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 KATNAL2Q8IYT4 538 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 SYCE1Q8N0S2 351 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 PLD5Q8N7P1 536 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 OR2T3Q8NH03 318 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 FAM71BQ8TC56 605 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 PRCCQ92733 491 aaPredicted RBP13.45□□□□□ -0.26
TUBD1-202ENST00000340993 ALS2CR12Q96Q35 445 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 LGMNQ99538 433 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 C10orf88Q9H8K7 445 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 RCOR3Q9P2K3 495 aaPredicted RBP13.45□□□□□ -0.26
TUBD1-202ENST00000340993 SUN2Q9UH99 717 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 FBXO4Q9UKT5 387 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 HS3ST2Q9Y278 367 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 PCDHA3Q9Y5H8 950 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 ZFHX2Q9C0A1 2572 aaPredicted RBP13.45□□□□□ -0.26
TUBD1-202ENST00000340993 A0A1W2PP55 124 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 FAM47DPA6NHR8 397 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 F5H423 210 aaPredicted RBP13.45□□□□□ -0.26
TUBD1-202ENST00000340993 KRIT1O00522 736 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 DDX3YO15523 660 aaKnown RBP13.45□□□□□ -0.26
TUBD1-202ENST00000340993 ATP9BO43861 1147 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 PRAMEF11O60813 436 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 CTSLP07711 333 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 RWDD2BP57060 319 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 YBEYP58557 167 aaPredicted RBP13.45□□□□□ -0.26
TUBD1-202ENST00000340993 MAXP61244 160 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 CAMK2GQ13555 558 aaPredicted RBP13.45□□□□□ -0.26
TUBD1-202ENST00000340993 LRRC73Q5JTD7 316 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 AFMIDQ63HM1 303 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 CEP68Q76N32 757 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 REXO1L1PQ8IX06 675 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 RNF10Q8N5U6 811 aaKnown RBP13.45□□□□□ -0.26
TUBD1-202ENST00000340993 UBL4BQ8N7F7 174 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 FAF2Q96CS3 445 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 SERGEFQ9UGK8 458 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 EBF1Q9UH73 591 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 SARDHQ9UL12 918 aa13.45□□□□□ -0.26
TUBD1-202ENST00000340993 hCG_1818297A0A087WSY0 165 aa13.44□□□□□ -0.26
TUBD1-202ENST00000340993 CCDC66A2RUB6 948 aa13.44□□□□□ -0.26
TUBD1-202ENST00000340993 NPC1O15118 1278 aa13.44□□□□□ -0.26
TUBD1-202ENST00000340993 INSIG1O15503 277 aa13.44□□□□□ -0.26
TUBD1-202ENST00000340993 HRO43593 1189 aa13.44□□□□□ -0.26
TUBD1-202ENST00000340993 ZNF821O75541 412 aaPredicted RBP13.44□□□□□ -0.26
TUBD1-202ENST00000340993 CTNNA2P26232 953 aa13.44□□□□□ -0.26
TUBD1-202ENST00000340993 CXCR5P32302 372 aa13.44□□□□□ -0.26
TUBD1-202ENST00000340993 RECQLP46063 649 aaPredicted RBP13.44□□□□□ -0.26
TUBD1-202ENST00000340993 RGRP47804 291 aa13.44□□□□□ -0.26
TUBD1-202ENST00000340993 CCNHP51946 323 aaPredicted RBP13.44□□□□□ -0.26
TUBD1-202ENST00000340993 ZNF135P52742 658 aaPredicted RBP13.44□□□□□ -0.26
TUBD1-202ENST00000340993 PTPN5P54829 565 aa13.44□□□□□ -0.26
TUBD1-202ENST00000340993 RPS14P62263 151 aaKnown RBP13.44□□□□□ -0.26
TUBD1-202ENST00000340993 SLC10A7Q0GE19 358 aa13.44□□□□□ -0.26
TUBD1-202ENST00000340993 AP1B1Q10567 949 aa13.44□□□□□ -0.26
TUBD1-202ENST00000340993 CYTH1Q15438 398 aa13.44□□□□□ -0.26
TUBD1-202ENST00000340993 KCTD19Q17RG1 926 aaPredicted RBP13.44□□□□□ -0.26
TUBD1-202ENST00000340993 ARSIQ5FYB1 569 aa13.44□□□□□ -0.26
TUBD1-202ENST00000340993 TFDP3Q5H9I0 405 aa13.44□□□□□ -0.26
TUBD1-202ENST00000340993 DCAF12L1Q5VU92 463 aa13.44□□□□□ -0.26
TUBD1-202ENST00000340993 ZC3H18Q86VM9 953 aaKnown RBP13.44□□□□□ -0.26
TUBD1-202ENST00000340993 LONP2Q86WA8 852 aa13.44□□□□□ -0.26
TUBD1-202ENST00000340993 RCOR2Q8IZ40 523 aa13.44□□□□□ -0.26
TUBD1-202ENST00000340993 CAMKK1Q8N5S9 505 aa13.44□□□□□ -0.26
TUBD1-202ENST00000340993 TSEN2Q8NCE0 465 aaKnown RBP13.44□□□□□ -0.26
TUBD1-202ENST00000340993 OR2A12Q8NGT7 310 aa13.44□□□□□ -0.26
TUBD1-202ENST00000340993 OR8D1Q8WZ84 308 aa13.44□□□□□ -0.26
TUBD1-202ENST00000340993 RBM41Q96IZ5 413 aaKnown RBP13.44□□□□□ -0.26
TUBD1-202ENST00000340993 FAM129BQ96TA1 746 aa13.44□□□□□ -0.26
TUBD1-202ENST00000340993 CINPQ9BW66 212 aaPredicted RBP13.44□□□□□ -0.26
TUBD1-202ENST00000340993 PDFQ9HBH1 243 aa13.44□□□□□ -0.26
TUBD1-202ENST00000340993 ZSCAN32Q9NX65 697 aa13.44□□□□□ -0.26
TUBD1-202ENST00000340993 DONSONQ9NYP3 566 aa13.44□□□□□ -0.26
TUBD1-202ENST00000340993 DTLQ9NZJ0 730 aa13.44□□□□□ -0.26
TUBD1-202ENST00000340993 EVLQ9UI08 416 aaPredicted RBP13.44□□□□□ -0.26
TUBD1-202ENST00000340993 KPNA3O00505 521 aaPredicted RBP13.43□□□□□ -0.26
TUBD1-202ENST00000340993 RNASEH1O60930 286 aaKnown RBP13.43□□□□□ -0.26
TUBD1-202ENST00000340993 RNASEH2AO75792 299 aaKnown RBP13.43□□□□□ -0.26
TUBD1-202ENST00000340993 RPP40O75818 363 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms