RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 GMEB2Q9UKD1 530 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 SARDHQ9UL12 918 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 SCML1Q9UN30 329 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 ZNF292O60281 2723 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 EP300Q09472 2414 aaPredicted RBP15.55■□□□□ 0.08
UBE3B-201ENST00000340074 ZSCAN5CA6NGD5 496 aaPredicted RBP15.54■□□□□ 0.08
UBE3B-201ENST00000340074 ARHGAP42A6NI28 874 aa15.54■□□□□ 0.08
UBE3B-201ENST00000340074 J3KR12 359 aa15.54■□□□□ 0.08
UBE3B-201ENST00000340074 DFFAO00273 331 aa15.54■□□□□ 0.08
UBE3B-201ENST00000340074 PJA2O43164 708 aa15.54■□□□□ 0.08
UBE3B-201ENST00000340074 SPOPO43791 374 aa15.54■□□□□ 0.08
UBE3B-201ENST00000340074 NDUFS2O75306 463 aa15.54■□□□□ 0.08
UBE3B-201ENST00000340074 TNNT1P13805 278 aa15.54■□□□□ 0.08
UBE3B-201ENST00000340074 OXTRP30559 389 aa15.54■□□□□ 0.08
UBE3B-201ENST00000340074 SLC8A1P32418 973 aa15.54■□□□□ 0.08
UBE3B-201ENST00000340074 DNA2P51530 1060 aa15.54■□□□□ 0.08
UBE3B-201ENST00000340074 LPCAT2Q7L5N7 544 aa15.54■□□□□ 0.08
UBE3B-201ENST00000340074 DSG4Q86SJ6 1040 aa15.54■□□□□ 0.08
UBE3B-201ENST00000340074 TP53INP2Q8IXH6 220 aa15.54■□□□□ 0.08
UBE3B-201ENST00000340074 DCLK2Q8N568 766 aa15.54■□□□□ 0.08
UBE3B-201ENST00000340074 LZTR1Q8N653 840 aa15.54■□□□□ 0.08
UBE3B-201ENST00000340074 PCDH20Q8N6Y1 951 aaKnown RBP15.54■□□□□ 0.08
UBE3B-201ENST00000340074 RAPGEF5Q92565 580 aa15.54■□□□□ 0.08
UBE3B-201ENST00000340074 RUBCNQ92622 972 aa15.54■□□□□ 0.08
UBE3B-201ENST00000340074 CCDC114Q96M63 670 aa15.54■□□□□ 0.08
UBE3B-201ENST00000340074 FBXL12Q9NXK8 326 aa15.54■□□□□ 0.08
UBE3B-201ENST00000340074 WSB2Q9NYS7 404 aaPredicted RBP15.54■□□□□ 0.08
UBE3B-201ENST00000340074 SERGEFQ9UGK8 458 aa15.54■□□□□ 0.08
UBE3B-201ENST00000340074 FARP1Q9Y4F1 1045 aaPredicted RBP15.54■□□□□ 0.08
UBE3B-201ENST00000340074 ALG6Q9Y672 507 aa15.54■□□□□ 0.08
UBE3B-201ENST00000340074 DMXL1Q9Y485 3027 aa15.54■□□□□ 0.08
UBE3B-201ENST00000340074 PIEZO1Q92508 2521 aa15.53■□□□□ 0.08
UBE3B-201ENST00000340074 BTNL10A8MVZ5 291 aa15.53■□□□□ 0.08
UBE3B-201ENST00000340074 ALOX15BO15296 676 aa15.53■□□□□ 0.08
UBE3B-201ENST00000340074 TMCC1O94876 653 aa15.53■□□□□ 0.08
UBE3B-201ENST00000340074 ADH1BP00325 375 aa15.53■□□□□ 0.08
UBE3B-201ENST00000340074 CTSLP07711 333 aa15.53■□□□□ 0.08
UBE3B-201ENST00000340074 RETP07949 1114 aa15.53■□□□□ 0.08
UBE3B-201ENST00000340074 C5AR1P21730 350 aa15.53■□□□□ 0.08
UBE3B-201ENST00000340074 KDELR1P24390 212 aa15.53■□□□□ 0.08
UBE3B-201ENST00000340074 RECQLP46063 649 aaPredicted RBP15.53■□□□□ 0.08
UBE3B-201ENST00000340074 DHPSP49366 369 aaPredicted RBP15.53■□□□□ 0.08
UBE3B-201ENST00000340074 ANKRD20A8PQ5CZ79 823 aa15.53■□□□□ 0.08
UBE3B-201ENST00000340074 DPY19L3Q6ZPD9 716 aa15.53■□□□□ 0.08
UBE3B-201ENST00000340074 ARHGAP36Q6ZRI8 547 aa15.53■□□□□ 0.08
UBE3B-201ENST00000340074 ARMCX6Q7L4S7 300 aa15.53■□□□□ 0.08
UBE3B-201ENST00000340074 MAP7D3Q8IWC1 876 aa15.53■□□□□ 0.08
UBE3B-201ENST00000340074 RHOT1Q8IXI2 618 aa15.53■□□□□ 0.08
UBE3B-201ENST00000340074 AADATQ8N5Z0 425 aa15.53■□□□□ 0.08
UBE3B-201ENST00000340074 CHST14Q8NCH0 376 aa15.53■□□□□ 0.08
UBE3B-201ENST00000340074 TPCN2Q8NHX9 752 aa15.53■□□□□ 0.08
UBE3B-201ENST00000340074 GANCQ8TET4 914 aa15.53■□□□□ 0.08
UBE3B-201ENST00000340074 ISG20Q96AZ6 181 aaKnown RBP15.53■□□□□ 0.08
UBE3B-201ENST00000340074 LOXL4Q96JB6 756 aa15.53■□□□□ 0.08
UBE3B-201ENST00000340074 ZNF670Q9BS34 389 aa15.53■□□□□ 0.08
UBE3B-201ENST00000340074 GPR174Q9BXC1 333 aa15.53■□□□□ 0.08
UBE3B-201ENST00000340074 TM6SF2Q9BZW4 377 aa15.53■□□□□ 0.08
UBE3B-201ENST00000340074 PDFQ9HBH1 243 aa15.53■□□□□ 0.08
UBE3B-201ENST00000340074 PPM1HQ9ULR3 514 aa15.53■□□□□ 0.08
UBE3B-201ENST00000340074 NCKAP1Q9Y2A7 1128 aa15.53■□□□□ 0.08
UBE3B-201ENST00000340074 ADAMTS9Q9P2N4 1935 aa15.53■□□□□ 0.08
UBE3B-201ENST00000340074 PLXNA2O75051 1894 aa15.53■□□□□ 0.08
UBE3B-201ENST00000340074 A0A0U1RQJ8 604 aa15.52■□□□□ 0.08
UBE3B-201ENST00000340074 A0A1W2PP55 124 aa15.52■□□□□ 0.08
UBE3B-201ENST00000340074 PRAMEF11O60813 436 aa15.52■□□□□ 0.08
UBE3B-201ENST00000340074 EPN2O95208 641 aa15.52■□□□□ 0.08
UBE3B-201ENST00000340074 CHRNA3P32297 505 aa15.52■□□□□ 0.08
UBE3B-201ENST00000340074 ACSL1P33121 698 aa15.52■□□□□ 0.08
UBE3B-201ENST00000340074 PTGER3P43115 390 aa15.52■□□□□ 0.08
UBE3B-201ENST00000340074 METAP1P53582 386 aa15.52■□□□□ 0.08
UBE3B-201ENST00000340074 NAP1L1P55209 391 aaKnown RBP15.52■□□□□ 0.08
UBE3B-201ENST00000340074 POM121L1PQ3SYA9 428 aa15.52■□□□□ 0.08
UBE3B-201ENST00000340074 INO80DQ53TQ3 878 aaPredicted RBP15.52■□□□□ 0.08
UBE3B-201ENST00000340074 CARD16Q5EG05 197 aa15.52■□□□□ 0.08
UBE3B-201ENST00000340074 LRRC38Q5VT99 294 aa15.52■□□□□ 0.08
UBE3B-201ENST00000340074 C11orf63Q6NUN7 778 aa15.52■□□□□ 0.08
UBE3B-201ENST00000340074 USP30Q70CQ3 517 aa15.52■□□□□ 0.08
UBE3B-201ENST00000340074 DAAM2Q86T65 1068 aa15.52■□□□□ 0.08
UBE3B-201ENST00000340074 SLC41A1Q8IVJ1 513 aa15.52■□□□□ 0.08
UBE3B-201ENST00000340074 HDDC3Q8N4P3 179 aa15.52■□□□□ 0.08
UBE3B-201ENST00000340074 PCDH19Q8TAB3 1148 aa15.52■□□□□ 0.08
UBE3B-201ENST00000340074 PIP4K2CQ8TBX8 421 aa15.52■□□□□ 0.08
UBE3B-201ENST00000340074 OMDQ99983 421 aa15.52■□□□□ 0.08
UBE3B-201ENST00000340074 NEUROG2Q9H2A3 272 aa15.52■□□□□ 0.08
UBE3B-201ENST00000340074 ARRDC1-AS1Q9H2J1 176 aa15.52■□□□□ 0.08
UBE3B-201ENST00000340074 UBA2Q9UBT2 640 aaPredicted RBP15.52■□□□□ 0.08
UBE3B-201ENST00000340074 TRIM10Q9UDY6 481 aa15.52■□□□□ 0.08
UBE3B-201ENST00000340074 IL36AQ9UHA7 158 aa15.52■□□□□ 0.08
UBE3B-201ENST00000340074 LRRD1A4D1F6 860 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 C1QTNF3-AMACRE9PGA6 284 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 RNF103O00237 685 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 PLK4O00444 970 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 RNASEH2AO75792 299 aaKnown RBP15.51■□□□□ 0.07
UBE3B-201ENST00000340074 PTPRZ1P23471 2315 aaPredicted RBP15.51■□□□□ 0.07
UBE3B-201ENST00000340074 SERPINB6P35237 376 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 DRD3P35462 400 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 CCNHP51946 323 aaPredicted RBP15.51■□□□□ 0.07
UBE3B-201ENST00000340074 CREB5Q02930 508 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 SPEM2Q0P670 501 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 TP53BP1Q12888 1972 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms