RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 DSG4Q86SJ6 1040 aa13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 ZNF677Q86XU0 584 aa13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 MFSD2AQ8NA29 543 aa13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 NEK11Q8NG66 645 aa13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 GRIN3AQ8TCU5 1115 aa13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 C2orf49Q9BVC5 232 aaPredicted RBP13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 ZYG11BQ9C0D3 744 aa13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 ATP13A1Q9HD20 1204 aa13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 GDF3Q9NR23 364 aa13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 ADAM22Q9P0K1 906 aa13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 OR12D3Q9UGF7 316 aa13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 WASF2Q9Y6W5 498 aa13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 NYNRINQ9P2P1 1898 aaKnown RBP13.65□□□□□ -0.22
NUDCD3-201ENST00000338427 DOCK4Q8N1I0 1966 aa13.65□□□□□ -0.22
NUDCD3-201ENST00000338427 LRRC10BA6NIK2 292 aa13.65□□□□□ -0.22
NUDCD3-201ENST00000338427 PCDH8O95206 1070 aa13.65□□□□□ -0.22
NUDCD3-201ENST00000338427 KRT3P12035 628 aa13.65□□□□□ -0.22
NUDCD3-201ENST00000338427 HDAC4P56524 1084 aa13.65□□□□□ -0.22
NUDCD3-201ENST00000338427 MTA1Q13330 715 aa13.65□□□□□ -0.22
NUDCD3-201ENST00000338427 STAT4Q14765 748 aa13.65□□□□□ -0.22
NUDCD3-201ENST00000338427 CLEC16AQ2KHT3 1053 aa13.65□□□□□ -0.22
NUDCD3-201ENST00000338427 C6orf118Q5T5N4 469 aa13.65□□□□□ -0.22
NUDCD3-201ENST00000338427 NAPEPLDQ6IQ20 393 aa13.65□□□□□ -0.22
NUDCD3-201ENST00000338427 C22orf39Q6P5X5 142 aa13.65□□□□□ -0.22
NUDCD3-201ENST00000338427 C19orf48Q6RUI8 117 aa13.65□□□□□ -0.22
NUDCD3-201ENST00000338427 KDM7AQ6ZMT4 941 aa13.65□□□□□ -0.22
NUDCD3-201ENST00000338427 DCAF4L2Q8NA75 395 aa13.65□□□□□ -0.22
NUDCD3-201ENST00000338427 TMIEQ8NEW7 156 aa13.65□□□□□ -0.22
NUDCD3-201ENST00000338427 OR6K2Q8NGY2 324 aa13.65□□□□□ -0.22
NUDCD3-201ENST00000338427 FAM172AQ8WUF8 416 aa13.65□□□□□ -0.22
NUDCD3-201ENST00000338427 CENPIQ92674 756 aaPredicted RBP13.65□□□□□ -0.22
NUDCD3-201ENST00000338427 VOPP1Q96AW1 172 aa13.65□□□□□ -0.22
NUDCD3-201ENST00000338427 AGPAT1Q99943 283 aa13.65□□□□□ -0.22
NUDCD3-201ENST00000338427 KLC2Q9H0B6 622 aa13.65□□□□□ -0.22
NUDCD3-201ENST00000338427 SEPT11Q9NVA2 429 aaKnown RBP13.65□□□□□ -0.22
NUDCD3-201ENST00000338427 ANO10Q9NW15 660 aa13.65□□□□□ -0.22
NUDCD3-201ENST00000338427 TDRD6O60522 2096 aaKnown RBP13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 TP53BP1Q12888 1972 aaPredicted RBP13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 TRABD2BA6NFA1 517 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 LGALS16A8MUM7 142 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 ENC1O14682 589 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 ALOX15BO15296 676 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 SLC7A4O43246 635 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 LRIG2O94898 1065 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 LDOC1O95751 146 aaPredicted RBP13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 PLEKP08567 350 aaPredicted RBP13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 MYF5P13349 255 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 ITIH2P19823 946 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 SDC4P31431 198 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 RPL7AP62424 266 aaKnown RBP13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 FGL2Q14314 439 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 ZNF284Q2VY69 593 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 ZNF542PQ5EBM4 170 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 CARD16Q5EG05 197 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 MANEALQ5VSG8 457 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 SCYL2Q6P3W7 929 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 ERN2Q76MJ5 926 aaKnown RBP13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 ARCQ7LC44 396 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 KANSL1Q7Z3B3 1105 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 NLRP14Q86W24 1093 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 TRIM69Q86WT6 500 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 AOPEPQ8N6M6 819 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 MSANTD4Q8NCY6 345 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 ARHGEF2Q92974 986 aaKnown RBP13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 SKA1Q96BD8 255 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 KLHDC7BQ96G42 594 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 CNDP2Q96KP4 475 aaKnown RBP13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 TM6SF2Q9BZW4 377 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 OSBPL2Q9H1P3 480 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 KDM4CQ9H3R0 1056 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 TAS2R14Q9NYV8 317 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 TMEM63CQ9P1W3 806 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 PPARGC1AQ9UBK2 798 aaKnown RBP13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 FTSJ1Q9UET6 329 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 IL36AQ9UHA7 158 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 FARP1Q9Y4F1 1045 aaPredicted RBP13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 PAXBP1Q9Y5B6 917 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 CHD6Q8TD26 2715 aa13.64□□□□□ -0.23
NUDCD3-201ENST00000338427 ARID1BQ8NFD5 2236 aaPredicted RBP13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 TCRBV5S1A1TA0A578 114 aa13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 TMEM8BA6NDV4 472 aa13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 TMCO5BA8MYB1 307 aa13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 PRAMEF26H0Y7S4 382 aa13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 DFNA5O60443 496 aa13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 PAK4O96013 591 aaPredicted RBP13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 TPM2P07951 284 aa13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 HOXB3P14651 431 aaPredicted RBP13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 GPD1P21695 349 aa13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 EPHA8P29322 1005 aaPredicted RBP13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 RXRGP48443 463 aa13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 SERPINH1P50454 418 aaKnown RBP13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 CCNHP51946 323 aaPredicted RBP13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 MYL5Q02045 173 aa13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 OGDHQ02218 1023 aa13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 CYP4F3Q08477 520 aa13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 MAPK8IP2Q13387 824 aaPredicted RBP13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 RETSATQ6NUM9 610 aa13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 IRF2BP2Q7Z5L9 587 aa13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 HORMAD1Q86X24 394 aa13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 PHF13Q86YI8 300 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms