RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 RSL24D1Q9UHA3 163 aaKnown RBP13.25□□□□□ -0.29
HLCS-201ENST00000336648 LEF1Q9UJU2 399 aaPredicted RBP13.25□□□□□ -0.29
HLCS-201ENST00000336648 TAF6LQ9Y6J9 622 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 NFASCO94856 1347 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 PSMG1O95456 288 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 RARAP10276 462 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 MTTPP55157 894 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 PTSQ03393 145 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 DPYSL3Q14195 570 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 PGM5Q15124 567 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 BROXQ5VW32 411 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 RASSF6Q6ZTQ3 369 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 LRRC14BA6NHZ5 514 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 YBX3P16989 372 aaKnown RBP eCLIP13.25□□□□□ -0.29
HLCS-201ENST00000336648 RAB25P57735 213 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 SPIDRQ14159 915 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 CBWD6Q4V339 395 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 ULK3Q6PHR2 472 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 EIF3MQ7L2H7 374 aaKnown RBP13.25□□□□□ -0.29
HLCS-201ENST00000336648 CAMKK1Q8N5S9 505 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 S100ZQ8WXG8 99 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 UROC1Q96N76 676 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 POP1Q99575 1024 aaKnown RBP13.25□□□□□ -0.29
HLCS-201ENST00000336648 KIAA1683Q9H0B3 1180 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 STARD7Q9NQZ5 370 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 CLN6Q9NWW5 311 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 C3orf18Q9UK00 162 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 ANGPT4Q9Y264 503 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 MTF2Q9Y483 593 aaPredicted RBP13.25□□□□□ -0.29
HLCS-201ENST00000336648 MFHAS1Q9Y4C4 1052 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 C1orf167Q5SNV9 1468 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 CXCL11O14625 94 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 SLC9A3R1O14745 358 aaPredicted RBP13.25□□□□□ -0.29
HLCS-201ENST00000336648 SCGNO76038 276 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 RBBP4Q09028 425 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 TCHHL1Q5QJ38 904 aaPredicted RBP13.25□□□□□ -0.29
HLCS-201ENST00000336648 PSTKQ8IV42 348 aaKnown RBP13.25□□□□□ -0.29
HLCS-201ENST00000336648 GNPTGQ9UJJ9 305 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 CAMSAP1Q5T5Y3 1602 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 OR6B1O95007 311 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 RARRES1P49788 294 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 OLFML2AQ68BL7 652 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 RNF43Q68DV7 783 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 AGMOQ6ZNB7 445 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 ZNF621Q6ZSS3 439 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 FBXO16Q8IX29 292 aaPredicted RBP13.24□□□□□ -0.29
HLCS-201ENST00000336648 ACER1Q8TDN7 264 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 SLC38A2Q96QD8 506 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 C8orf4Q9NR00 106 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 ANKDD1BA6NHY2 528 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 ADSSP30520 456 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 CREMQ03060 361 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 BIKQ13323 160 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 ATP13A5Q4VNC0 1218 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 MAP4K3Q8IVH8 894 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 TMEM134Q9H6X4 195 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 CCNB1IP1Q9NPC3 277 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 ERN1O75460 977 aaKnown RBP13.24□□□□□ -0.29
HLCS-201ENST00000336648 ALOX5P09917 674 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 ATP5F1P24539 256 aaPredicted RBP13.24□□□□□ -0.29
HLCS-201ENST00000336648 FAAP100Q0VG06 881 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 BOP1Q14137 746 aaKnown RBP13.24□□□□□ -0.29
HLCS-201ENST00000336648 TAF13Q15543 124 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 MEA1Q16626 185 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 THOC7Q6I9Y2 204 aaKnown RBP13.24□□□□□ -0.29
HLCS-201ENST00000336648 TXNDC11Q6PKC3 985 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 IL27RAQ6UWB1 636 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 REPS2Q8NFH8 660 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 MTMR8Q96EF0 704 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 SNTG2Q9NY99 539 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 UBP1Q9NZI7 540 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 SIK3Q9Y2K2 1263 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 IRGMA1A4Y4 181 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 H3BQF6 201 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 SLC28A1O00337 649 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 CBFA2T3O75081 653 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 HIST1H2ABP04908 130 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 NOS2P35228 1153 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 CLK3P49761 638 aaKnown RBP13.24□□□□□ -0.29
HLCS-201ENST00000336648 CHN2P52757 468 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 ERVK-9P63128 1117 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 ACOX1Q15067 660 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 TCEAL5Q5H9L2 206 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 NEPROQ6NW34 567 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 KCNT2Q6UVM3 1135 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 CRELD2Q6UXH1 353 aaPredicted RBP13.24□□□□□ -0.29
HLCS-201ENST00000336648 HIST3H2AQ7L7L0 130 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 PAGE2Q7Z2X7 111 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 FAM81AQ8TBF8 368 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 TATDN2Q93075 761 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 HIST1H2ACQ93077 130 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 CELF6Q96J87 481 aaKnown RBP13.24□□□□□ -0.29
HLCS-201ENST00000336648 APBA2Q99767 749 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 OXCT2Q9BYC2 517 aaPredicted RBP13.24□□□□□ -0.29
HLCS-201ENST00000336648 UNC13BO14795 1591 aa13.24□□□□□ -0.29
HLCS-201ENST00000336648 AREL1O15033 823 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 GNRH1P01148 92 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 FGFR1P11362 822 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 AMPD1P23109 780 aa13.23□□□□□ -0.29
HLCS-201ENST00000336648 CES1P23141 567 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms