RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.95■□□□□ 0.3
TMEM39B-201ENST00000336294 TMEM248Q9NWD8 314 aa16.95■□□□□ 0.3
TMEM39B-201ENST00000336294 TMEM216Q9P0N5 145 aa16.95■□□□□ 0.3
TMEM39B-201ENST00000336294 NYNRINQ9P2P1 1898 aaKnown RBP16.95■□□□□ 0.3
TMEM39B-201ENST00000336294 MTMR11A4FU01 709 aa16.94■□□□□ 0.3
TMEM39B-201ENST00000336294 H7C4K7 107 aa16.94■□□□□ 0.3
TMEM39B-201ENST00000336294 SERPINE1P05121 402 aa16.94■□□□□ 0.3
TMEM39B-201ENST00000336294 PRKCGP05129 697 aa16.94■□□□□ 0.3
TMEM39B-201ENST00000336294 GRK2P25098 689 aa16.94■□□□□ 0.3
TMEM39B-201ENST00000336294 GATMP50440 423 aa16.94■□□□□ 0.3
TMEM39B-201ENST00000336294 CDK7P50613 346 aa16.94■□□□□ 0.3
TMEM39B-201ENST00000336294 CCNG1P51959 295 aa16.94■□□□□ 0.3
TMEM39B-201ENST00000336294 GPR17Q13304 367 aa16.94■□□□□ 0.3
TMEM39B-201ENST00000336294 KRT72Q14CN4 511 aa16.94■□□□□ 0.3
TMEM39B-201ENST00000336294 PSMD5Q16401 504 aa16.94■□□□□ 0.3
TMEM39B-201ENST00000336294 MGAT5BQ3V5L5 792 aa16.94■□□□□ 0.3
TMEM39B-201ENST00000336294 ACBD5Q5T8D3 534 aaPredicted RBP16.94■□□□□ 0.3
TMEM39B-201ENST00000336294 DENND5AQ6IQ26 1287 aa16.94■□□□□ 0.3
TMEM39B-201ENST00000336294 FUT10Q6P4F1 479 aa16.94■□□□□ 0.3
TMEM39B-201ENST00000336294 VPS39Q96JC1 886 aa16.94■□□□□ 0.3
TMEM39B-201ENST00000336294 SPATA17Q96L03 361 aa16.94■□□□□ 0.3
TMEM39B-201ENST00000336294 B3GALT6Q96L58 329 aa16.94■□□□□ 0.3
TMEM39B-201ENST00000336294 MCMBPQ9BTE3 642 aa16.94■□□□□ 0.3
TMEM39B-201ENST00000336294 NOL6Q9H6R4 1146 aaKnown RBP16.94■□□□□ 0.3
TMEM39B-201ENST00000336294 TLE6Q9H808 572 aa16.94■□□□□ 0.3
TMEM39B-201ENST00000336294 ZNF395Q9H8N7 513 aaPredicted RBP16.94■□□□□ 0.3
TMEM39B-201ENST00000336294 MRM3Q9HC36 420 aaKnown RBP16.94■□□□□ 0.3
TMEM39B-201ENST00000336294 FBXO6Q9NRD1 293 aaPredicted RBP16.94■□□□□ 0.3
TMEM39B-201ENST00000336294 COPG2Q9UBF2 871 aa16.94■□□□□ 0.3
TMEM39B-201ENST00000336294 HTTP42858 3142 aa16.94■□□□□ 0.3
TMEM39B-201ENST00000336294 A0A096LPK6 155 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 C2orf71A6NGG8 1288 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 FCHO1O14526 889 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 KCNA4P22459 653 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 SLC1A6P48664 564 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 RENBPP51606 427 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 TAF10Q12962 218 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 HNRNPDQ14103 355 aaKnown RBP16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 POU6F1Q14863 301 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 GPNMBQ14956 572 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 C10orf120Q5SQS8 335 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 FAM126BQ8IXS8 530 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 C2orf15Q8WU43 125 aaKnown RBP16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 UTP4Q969X6 686 aaKnown RBP16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 NSL1Q96IY1 281 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 SEPT5Q99719 369 aaPredicted RBP16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 TMEM175Q9BSA9 504 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 OXCT2Q9BYC2 517 aaPredicted RBP16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 MRPL9Q9BYD2 267 aaKnown RBP16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 C20orf27Q9GZN8 174 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 ARL8BQ9NVJ2 186 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 MARCH2Q9P0N8 246 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 SLC27A5Q9Y2P5 690 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 TCAF1Q9Y4C2 921 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 MRPL42Q9Y6G3 142 aaKnown RBP16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 IGLV3-10A0A075B6K4 115 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 PMPCBO75439 489 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 SOAT2O75908 522 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 KITP10721 976 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 HAPLN1P10915 354 aaPredicted RBP16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 CPA3P15088 417 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 AQP5P55064 265 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 ARHGEF6Q15052 776 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 UGP2Q16851 508 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 WASHC2DQ5SRD0 308 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 ARMC3Q5W041 872 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 TFAP2DQ7Z6R9 452 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 CLEC14AQ86T13 490 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 NPAS4Q8IUM7 802 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 C10orf107Q8IVU9 208 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 WDR75Q8IWA0 830 aaKnown RBP16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 PTCD3Q96EY7 689 aaKnown RBP16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 MRGPRX2Q96LB1 330 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 ZNF778Q96MU6 729 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 GPR22Q99680 433 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 TBC1D10AQ9BXI6 508 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 SLC25A51Q9H1U9 297 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 RHOJQ9H4E5 214 aa16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 MARCOQ9UEW3 520 aaPredicted RBP16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 FNDC1Q4ZHG4 1894 aaPredicted RBP16.93■□□□□ 0.3
TMEM39B-201ENST00000336294 PITPNM1O00562 1244 aa16.92■□□□□ 0.3
TMEM39B-201ENST00000336294 CCDC22O60826 627 aa16.92■□□□□ 0.3
TMEM39B-201ENST00000336294 ANP32DO95626 131 aa16.92■□□□□ 0.3
TMEM39B-201ENST00000336294 PAMP19021 973 aa16.92■□□□□ 0.3
TMEM39B-201ENST00000336294 CALB2P22676 271 aa16.92■□□□□ 0.3
TMEM39B-201ENST00000336294 RNF19BQ6ZMZ0 732 aa16.92■□□□□ 0.3
TMEM39B-201ENST00000336294 ANKS3Q6ZW76 656 aa16.92■□□□□ 0.3
TMEM39B-201ENST00000336294 ALYREFQ86V81 257 aaKnown RBP16.92■□□□□ 0.3
TMEM39B-201ENST00000336294 LONP2Q86WA8 852 aa16.92■□□□□ 0.3
TMEM39B-201ENST00000336294 MIB1Q86YT6 1006 aa16.92■□□□□ 0.3
TMEM39B-201ENST00000336294 CNTN4Q8IWV2 1026 aa16.92■□□□□ 0.3
TMEM39B-201ENST00000336294 PPP4R1Q8TF05 950 aa16.92■□□□□ 0.3
TMEM39B-201ENST00000336294 HMCESQ96FZ2 354 aa16.92■□□□□ 0.3
TMEM39B-201ENST00000336294 CAB39LQ9H9S4 337 aa16.92■□□□□ 0.3
TMEM39B-201ENST00000336294 ANKRD6Q9Y2G4 727 aa16.92■□□□□ 0.3
TMEM39B-201ENST00000336294 TTC3P53804 2025 aa16.92■□□□□ 0.3
TMEM39B-201ENST00000336294 SLC12A8A0AV02 714 aa16.91■□□□□ 0.3
TMEM39B-201ENST00000336294 E2F8A0AVK6 867 aa16.91■□□□□ 0.3
TMEM39B-201ENST00000336294 CCDC78A2IDD5 438 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms