RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 CCDC81Q6ZN84 652 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 METTL6Q8TCB7 284 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 PCED1BQ96HM7 432 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 DEFB118Q96PH6 123 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 STXBP5LQ9Y2K9 1186 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 HNRNPCL2B2RXH8 293 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 TARBP2Q15633 366 aaKnown RBP13.18□□□□□ -0.3
VSTM4-202ENST00000332853 DOK6Q6PKX4 331 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 STRADAQ7RTN6 431 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 GPSM1Q86YR5 675 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 PCDH20Q8N6Y1 951 aaKnown RBP13.18□□□□□ -0.3
VSTM4-202ENST00000332853 RMND5AQ9H871 391 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 TDRKHQ9Y2W6 561 aaKnown RBP13.18□□□□□ -0.3
VSTM4-202ENST00000332853 DYRK1BQ9Y463 629 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 LTA4HP09960 611 aaKnown RBP13.18□□□□□ -0.3
VSTM4-202ENST00000332853 SKIV2L2P42285 1042 aaKnown RBP13.18□□□□□ -0.3
VSTM4-202ENST00000332853 WLSQ5T9L3 541 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 ANKS6Q68DC2 871 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 TRIM48Q8IWZ4 208 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 OR6K2Q8NGY2 324 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 PIWIL2Q8TC59 973 aaKnown RBP13.18□□□□□ -0.3
VSTM4-202ENST00000332853 CXorf56Q9H5V9 222 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 MGAT4DA6NG13 374 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 AGPSO00116 658 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 ADRA1BP35368 520 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 MRPS35P82673 323 aaKnown RBP13.17□□□□□ -0.3
VSTM4-202ENST00000332853 MILR1Q7Z6M3 343 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 FUKQ8N0W3 1084 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 CD99L2Q8TCZ2 262 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 PYDC1Q8WXC3 89 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 FIG4Q92562 907 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 FTHL17Q9BXU8 183 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 PRDM16Q9HAZ2 1276 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 RAD54BQ9Y620 910 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 MSCO60682 206 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 OR1D2P34982 312 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 SLC5A3P53794 718 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 LILRA4P59901 499 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 TRMT5Q32P41 509 aaKnown RBP13.17□□□□□ -0.3
VSTM4-202ENST00000332853 USP41Q3LFD5 358 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 PACS1Q6VY07 963 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 TRPC4APQ8TEL6 797 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 THAP11Q96EK4 314 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 FZD8Q9H461 694 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 MAGEA13PA6NCF6 341 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 KPNA3O00505 521 aaPredicted RBP13.17□□□□□ -0.3
VSTM4-202ENST00000332853 SEC22BO75396 215 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 USP1O94782 785 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 PARNO95453 639 aaKnown RBP13.17□□□□□ -0.3
VSTM4-202ENST00000332853 ALOX15P16050 662 aaPredicted RBP13.17□□□□□ -0.3
VSTM4-202ENST00000332853 CDH2P19022 906 aaPredicted RBP13.17□□□□□ -0.3
VSTM4-202ENST00000332853 MYBPHLA2RUH7 354 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 TAF10Q12962 218 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 OR52K2Q8NGK3 314 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 MAGED4Q96JG8 741 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 RHOBTB2Q9BYZ6 727 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 TRMT13Q9NUP7 481 aaKnown RBP13.17□□□□□ -0.3
VSTM4-202ENST00000332853 CROTQ9UKG9 612 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 NDUFAF1Q9Y375 327 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 CCDC88AQ3V6T2 1871 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 CCDC154A6NI56 674 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 MRASO14807 208 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 SYNCRIPO60506 623 aaKnown RBP13.17□□□□□ -0.3
VSTM4-202ENST00000332853 XRCC4Q13426 336 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 TBCELQ5QJ74 424 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 WASHC2DQ5SRD0 308 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 IL27RAQ6UWB1 636 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 OR56A4Q8NGH8 313 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 B4GALNT2Q8NHY0 566 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 GDPD5Q8WTR4 605 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 CASP10Q92851 521 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 DPY30Q9C005 99 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 SEMA6AQ9H2E6 1030 aa13.17□□□□□ -0.3
VSTM4-202ENST00000332853 ALS2Q96Q42 1657 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 CDC25CP30307 473 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 RFX3P48380 749 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 CHRNB3Q05901 458 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 CA9Q16790 459 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 FNDC3BQ53EP0 1204 aaKnown RBP13.16□□□□□ -0.3
VSTM4-202ENST00000332853 MLPHQ9BV36 600 aaPredicted RBP13.16□□□□□ -0.3
VSTM4-202ENST00000332853 RNASEH1O60930 286 aaKnown RBP13.16□□□□□ -0.3
VSTM4-202ENST00000332853 FSBPO95073 299 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 RAB10P61026 200 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 ARHGAP1Q07960 439 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 RNF43Q68DV7 783 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 SCIMPQ6UWF3 145 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 MSL3Q8N5Y2 521 aaKnown RBP13.16□□□□□ -0.3
VSTM4-202ENST00000332853 SPOCK2Q92563 424 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 HDAC10Q969S8 669 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 ASB8Q9H765 288 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 PARVBQ9HBI1 364 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 ZBTB48P10074 688 aaPredicted RBP13.16□□□□□ -0.3
VSTM4-202ENST00000332853 HNRNPLP14866 589 aaKnown RBP eCLIP13.16□□□□□ -0.3
VSTM4-202ENST00000332853 TFEBP19484 476 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 SLC1A5Q15758 541 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 ERAP2Q6P179 960 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 PHACTR4Q8IZ21 702 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 PTGR2Q8N8N7 351 aaPredicted RBP13.16□□□□□ -0.3
VSTM4-202ENST00000332853 PLEKHO2Q8TD55 490 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 EMID1Q96A84 441 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms