RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 SLC11A2P49281 568 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 DNAJC3Q13217 504 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 TEDDM1Q5T9Z0 273 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 PGBD5Q8N414 524 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 PABPC5Q96DU9 382 aaKnown RBP17.23■□□□□ 0.35
DDX41-201ENST00000330503 PPP1R2P1Q96PQ5 205 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 FAM111AQ96PZ2 611 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 AGAP2Q99490 1192 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 ZMYND15Q9H091 742 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 VPS11Q9H270 941 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 ZNF334Q9HCZ1 680 aaPredicted RBP17.23■□□□□ 0.35
DDX41-201ENST00000330503 ENTPD7Q9NQZ7 604 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 INSL5Q9Y5Q6 135 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 ZFP37Q9Y6Q3 630 aaPredicted RBP17.23■□□□□ 0.35
DDX41-201ENST00000330503 ANAPC1Q9H1A4 1944 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 WDR91A4D1P6 747 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 NEBLO76041 1014 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 FGF18O76093 207 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 F11P03951 625 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 CORO1AP31146 461 aaKnown RBP17.23■□□□□ 0.35
DDX41-201ENST00000330503 WNT3AP56704 352 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 MAXP61244 160 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 ITIH4Q14624 930 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 SEPT7Q16181 437 aaKnown RBP17.23■□□□□ 0.35
DDX41-201ENST00000330503 PCID2Q5JVF3 399 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 PKN3Q6P5Z2 889 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 FAM47EQ6ZV65 393 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 KDELC2Q7Z4H8 507 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 OR52K2Q8NGK3 314 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 SLCO1B3Q9NPD5 702 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 MKS1Q9NXB0 559 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 ZFATQ9P243 1243 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 PLLPQ9Y342 182 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 ATXN2Q99700 1313 aaKnown RBP17.22■□□□□ 0.35
DDX41-201ENST00000330503 TTC24A2A3L6 582 aaPredicted RBP17.22■□□□□ 0.35
DDX41-201ENST00000330503 CARNS1A5YM72 827 aa17.22■□□□□ 0.35
DDX41-201ENST00000330503 PRAMEF11O60813 436 aa17.22■□□□□ 0.35
DDX41-201ENST00000330503 SGSHP51688 502 aa17.22■□□□□ 0.35
DDX41-201ENST00000330503 EPHB3P54753 998 aa17.22■□□□□ 0.35
DDX41-201ENST00000330503 RPS24P62847 133 aaKnown RBP17.22■□□□□ 0.35
DDX41-201ENST00000330503 MPP3Q13368 585 aa17.22■□□□□ 0.35
DDX41-201ENST00000330503 VEPH1Q14D04 833 aa17.22■□□□□ 0.35
DDX41-201ENST00000330503 HSP90AA5PQ58FG0 334 aa17.22■□□□□ 0.35
DDX41-201ENST00000330503 YTHDF3Q7Z739 585 aaKnown RBP17.22■□□□□ 0.35
DDX41-201ENST00000330503 ZNF354CQ86Y25 554 aa17.22■□□□□ 0.35
DDX41-201ENST00000330503 GPR65Q8IYL9 337 aa17.22■□□□□ 0.35
DDX41-201ENST00000330503 LRRC8CQ8TDW0 803 aa17.22■□□□□ 0.35
DDX41-201ENST00000330503 TADA1Q96BN2 335 aa17.22■□□□□ 0.35
DDX41-201ENST00000330503 PRICKLE1Q96MT3 831 aaPredicted RBP17.22■□□□□ 0.35
DDX41-201ENST00000330503 PITPNM3Q9BZ71 974 aa17.22■□□□□ 0.35
DDX41-201ENST00000330503 SLC13A1Q9BZW2 595 aa17.22■□□□□ 0.35
DDX41-201ENST00000330503 ZBP1Q9H171 429 aa17.22■□□□□ 0.35
DDX41-201ENST00000330503 ATXN3LQ9H3M9 355 aa17.22■□□□□ 0.35
DDX41-201ENST00000330503 ATP13A1Q9HD20 1204 aa17.22■□□□□ 0.35
DDX41-201ENST00000330503 ALG13Q9NP73 1137 aaKnown RBP17.22■□□□□ 0.35
DDX41-201ENST00000330503 PRKAG3Q9UGI9 489 aa17.22■□□□□ 0.35
DDX41-201ENST00000330503 AGO1Q9UL18 857 aaKnown RBP17.22■□□□□ 0.35
DDX41-201ENST00000330503 PCDHB12Q9Y5F1 795 aa17.22■□□□□ 0.35
DDX41-201ENST00000330503 A0A0D9SEW6 157 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 ALDOAP04075 364 aaKnown RBP17.21■□□□□ 0.35
DDX41-201ENST00000330503 ITGA2BP08514 1039 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 F7P08709 466 aaPredicted RBP17.21■□□□□ 0.35
DDX41-201ENST00000330503 PPM1AP35813 382 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 CHRNA4P43681 627 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 PPP3CCP48454 512 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 NUMBP49757 651 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 LBX1P52954 281 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 HTRA4P83105 476 aaPredicted RBP17.21■□□□□ 0.35
DDX41-201ENST00000330503 DSC2Q02487 901 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 GRTP1Q5TC63 336 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 NDUFAF2Q8N183 169 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 ARRDC2Q8TBH0 407 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 CYP2S1Q96SQ9 504 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 CPNE1Q99829 537 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 IL21Q9HBE4 155 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.21■□□□□ 0.35
DDX41-201ENST00000330503 MAFFQ9ULX9 164 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 USP15Q9Y4E8 981 aaPredicted RBP17.21■□□□□ 0.35
DDX41-201ENST00000330503 CNPP09543 421 aaKnown RBP17.21■□□□□ 0.35
DDX41-201ENST00000330503 CTSAP10619 480 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 IRF1P10914 325 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 CRHR1P34998 444 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 ETFBP38117 255 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 GP5P40197 560 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 CD86P42081 329 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 CDH4P55283 916 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 CORO7P57737 925 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 ITKQ08881 620 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 POU6F1Q14863 301 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 SPATA21Q7Z572 469 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 CCDC117Q8IWD4 279 aaPredicted RBP17.21■□□□□ 0.35
DDX41-201ENST00000330503 PTPRN2Q92932 1015 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 ZFRQ96KR1 1074 aaKnown RBP17.21■□□□□ 0.35
DDX41-201ENST00000330503 SLC22A12Q96S37 553 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 MCMBPQ9BTE3 642 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 RETREG1Q9H6L5 497 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 PDFQ9HBH1 243 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 ARNT2Q9HBZ2 717 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 C20orf96Q9NUD7 363 aaPredicted RBP17.21■□□□□ 0.35
DDX41-201ENST00000330503 PCMTD2Q9NV79 361 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms