RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 SLC12A6Q9UHW9 1150 aa16.82■□□□□ 0.28
PDLIM1-201ENST00000329399 GOLGA6BA6NDN3 693 aa16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 KCNU1A8MYU2 1149 aa16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 EEF2KO00418 725 aaKnown RBP16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 SASH3O75995 380 aa16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 PAPSS2O95340 614 aaPredicted RBP16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 SERPINB6P35237 376 aa16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 TNFRSF4P43489 277 aa16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 EIF3BP55884 814 aaKnown RBP16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 MMRN1Q13201 1228 aa16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 PAFAH1B3Q15102 231 aaKnown RBP16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 CA9Q16790 459 aa16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 PIK3R6Q5UE93 754 aa16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 GRAMD4Q6IC98 578 aa16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 DARS2Q6PI48 645 aaKnown RBP16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 ZDHHC24Q6UX98 284 aa16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 TMC3Q7Z5M5 1100 aa16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 ALYREFQ86V81 257 aaKnown RBP16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 HOOK3Q86VS8 718 aa16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 RELL1Q8IUW5 271 aa16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 IQCKQ8N0W5 287 aa16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 FBXO25Q8TCJ0 367 aa16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 DDI1Q8WTU0 396 aa16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 RNF34Q969K3 372 aa16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 PRICKLE1Q96MT3 831 aaPredicted RBP16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 HHIPQ96QV1 700 aa16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 IER2Q9BTL4 223 aa16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 RETREG1Q9H6L5 497 aa16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 TMPRSS4Q9NRS4 437 aa16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 GPATCH2LQ9NWQ4 482 aa16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 TPX2Q9ULW0 747 aaKnown RBP16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 KIAA1549LQ6ZVL6 1849 aa16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 FANCMQ8IYD8 2048 aa16.81■□□□□ 0.28
PDLIM1-201ENST00000329399 WASH3PC4AMC7 463 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 H7C0C1 242 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 DNALI1O14645 258 aaPredicted RBP16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 HRO43593 1189 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 KLF8O95600 359 aaPredicted RBP16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 WASP42768 502 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 ATP5OP48047 213 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 DGKGP49619 791 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 RPS24P62847 133 aaKnown RBP16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 ZNF33AQ06730 810 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 DPYSQ14117 519 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 DMC1Q14565 340 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 PDK1Q15118 436 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 TRADDQ15628 312 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 P3H1Q32P28 736 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 ARTNQ5T4W7 220 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 EGFLAMQ63HQ2 1017 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 RFX8Q6ZV50 586 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 TRMT10CQ7L0Y3 403 aaKnown RBP16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 UNC45BQ8IWX7 931 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 GSPT2Q8IYD1 628 aaKnown RBP16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 CFAP52Q8N1V2 620 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 LZTR1Q8N653 840 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 TXNDC5Q8NBS9 432 aaKnown RBP16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 SORCS1Q8WY21 1168 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 TMA16Q96EY4 203 aaKnown RBP16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 XPO6Q96QU8 1125 aaKnown RBP16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 HINFPQ9BQA5 517 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 TMEM121Q9BTD3 319 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 TKTL2Q9H0I9 626 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 ZSCAN32Q9NX65 697 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 PAK5Q9P286 719 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 SHOC2Q9UQ13 582 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 GON4LQ3T8J9 2241 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 PROB1E7EW31 1015 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 PPP1R12AO14974 1030 aaPredicted RBP16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 FGF10O15520 208 aaPredicted RBP16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 MTSS1O43312 755 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 LILRB5O75023 590 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 STK10O94804 968 aaKnown RBP16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 FAM153BP0C7A2 387 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 GOT1P17174 413 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 MX2P20592 715 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 GGCXP38435 758 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 DHX9Q08211 1270 aaKnown RBP16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 CBLBQ13191 982 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 FAM153CQ494X1 144 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 SLC45A4Q5BKX6 768 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 NUGGCQ68CJ6 796 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 RNF43Q68DV7 783 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 HIBCHQ6NVY1 386 aaPredicted RBP16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 SYT13Q7L8C5 426 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 AZIN2Q96A70 460 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 PRMT1Q99873 361 aaKnown RBP16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 TXLNGYQ9BZA5 131 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 IRF2BPLQ9H1B7 796 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 OR12D3Q9UGF7 316 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 FAM153AQ9UHL3 310 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 SNX10Q9Y5X0 201 aa16.8■□□□□ 0.28
PDLIM1-201ENST00000329399 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.79■□□□□ 0.28
PDLIM1-201ENST00000329399 TBL1XO60907 577 aa16.79■□□□□ 0.28
PDLIM1-201ENST00000329399 LATS1O95835 1130 aa16.79■□□□□ 0.28
PDLIM1-201ENST00000329399 PECAM1P16284 738 aaPredicted RBP16.79■□□□□ 0.28
PDLIM1-201ENST00000329399 HLA-FP30511 346 aa16.79■□□□□ 0.28
PDLIM1-201ENST00000329399 SLC11A2P49281 568 aa16.79■□□□□ 0.28
PDLIM1-201ENST00000329399 IRAK1P51617 712 aa16.79■□□□□ 0.28
PDLIM1-201ENST00000329399 ITGA8P53708 1063 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms