RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 GATA5Q9BWX5 397 aaPredicted RBP22.7■■□□□ 1.23
PNKP-201ENST00000322344 C1QTNF1Q9BXJ1 281 aa22.7■■□□□ 1.23
PNKP-201ENST00000322344 ACE2Q9BYF1 805 aaPredicted RBP22.7■■□□□ 1.23
PNKP-201ENST00000322344 SLC39A8Q9C0K1 460 aa22.7■■□□□ 1.23
PNKP-201ENST00000322344 ILKAPQ9H0C8 392 aaPredicted RBP22.7■■□□□ 1.23
PNKP-201ENST00000322344 TASP1Q9H6P5 420 aa22.7■■□□□ 1.23
PNKP-201ENST00000322344 COG4Q9H9E3 785 aa22.7■■□□□ 1.23
PNKP-201ENST00000322344 FKBP6O75344 327 aa22.7■■□□□ 1.22
PNKP-201ENST00000322344 AP2B1P63010 937 aa22.7■■□□□ 1.22
PNKP-201ENST00000322344 LIPMQ5VYY2 423 aa22.7■■□□□ 1.22
PNKP-201ENST00000322344 NAPRTQ6XQN6 538 aa22.7■■□□□ 1.22
PNKP-201ENST00000322344 DTX3LQ8TDB6 740 aa22.7■■□□□ 1.22
PNKP-201ENST00000322344 NRG4Q8WWG1 115 aa22.7■■□□□ 1.22
PNKP-201ENST00000322344 STON2Q8WXE9 905 aa22.7■■□□□ 1.22
PNKP-201ENST00000322344 FCRL2Q96LA5 508 aaPredicted RBP22.7■■□□□ 1.22
PNKP-201ENST00000322344 ADAM2Q99965 735 aa22.7■■□□□ 1.22
PNKP-201ENST00000322344 FICDQ9BVA6 458 aa22.7■■□□□ 1.22
PNKP-201ENST00000322344 RRAGCQ9HB90 399 aa22.7■■□□□ 1.22
PNKP-201ENST00000322344 A0A088AWK7 358 aa22.69■■□□□ 1.22
PNKP-201ENST00000322344 TNFRSF10BO14763 440 aa22.69■■□□□ 1.22
PNKP-201ENST00000322344 ABL2P42684 1182 aa22.69■■□□□ 1.22
PNKP-201ENST00000322344 AFMIDQ63HM1 303 aa22.69■■□□□ 1.22
PNKP-201ENST00000322344 TDRD5Q8NAT2 981 aaKnown RBP22.69■■□□□ 1.22
PNKP-201ENST00000322344 ACVR1CQ8NER5 493 aa22.69■■□□□ 1.22
PNKP-201ENST00000322344 IPMKQ8NFU5 416 aa22.69■■□□□ 1.22
PNKP-201ENST00000322344 HASPINQ8TF76 798 aa22.69■■□□□ 1.22
PNKP-201ENST00000322344 SCG3Q8WXD2 468 aaKnown RBP22.69■■□□□ 1.22
PNKP-201ENST00000322344 CLPTM1LQ96KA5 538 aa22.69■■□□□ 1.22
PNKP-201ENST00000322344 DRC3Q9H069 523 aa22.69■■□□□ 1.22
PNKP-201ENST00000322344 PCDHB8Q9UN66 801 aa22.69■■□□□ 1.22
PNKP-201ENST00000322344 INPP5FQ9Y2H2 1132 aa22.69■■□□□ 1.22
PNKP-201ENST00000322344 RAP2CQ9Y3L5 183 aa22.69■■□□□ 1.22
PNKP-201ENST00000322344 PATJQ8NI35 1801 aa22.69■■□□□ 1.22
PNKP-201ENST00000322344 MEI4A8MW99 385 aa22.69■■□□□ 1.22
PNKP-201ENST00000322344 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.69■■□□□ 1.22
PNKP-201ENST00000322344 MAP3K7O43318 606 aa22.69■■□□□ 1.22
PNKP-201ENST00000322344 F7P08709 466 aaPredicted RBP22.69■■□□□ 1.22
PNKP-201ENST00000322344 PAMP19021 973 aa22.69■■□□□ 1.22
PNKP-201ENST00000322344 NCF2P19878 526 aaPredicted RBP22.69■■□□□ 1.22
PNKP-201ENST00000322344 ADRA1AP35348 466 aa22.69■■□□□ 1.22
PNKP-201ENST00000322344 GRIK1P39086 918 aa22.69■■□□□ 1.22
PNKP-201ENST00000322344 LPIN1Q14693 890 aa22.69■■□□□ 1.22
PNKP-201ENST00000322344 TMCO4Q5TGY1 634 aa22.69■■□□□ 1.22
PNKP-201ENST00000322344 VWA5B1Q5TIE3 1220 aa22.69■■□□□ 1.22
PNKP-201ENST00000322344 DENND5AQ6IQ26 1287 aa22.69■■□□□ 1.22
PNKP-201ENST00000322344 AAGABQ6PD74 315 aa22.69■■□□□ 1.22
PNKP-201ENST00000322344 CASP10Q92851 521 aa22.69■■□□□ 1.22
PNKP-201ENST00000322344 UBE2OQ9C0C9 1292 aaKnown RBP22.69■■□□□ 1.22
PNKP-201ENST00000322344 LRCH1Q9Y2L9 728 aa22.69■■□□□ 1.22
PNKP-201ENST00000322344 TCAF1Q9Y4C2 921 aa22.69■■□□□ 1.22
PNKP-201ENST00000322344 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.68■■□□□ 1.22
PNKP-201ENST00000322344 WASH4PA8MWX3 477 aa22.68■■□□□ 1.22
PNKP-201ENST00000322344 GOLGA8TH3BQL2 631 aa22.68■■□□□ 1.22
PNKP-201ENST00000322344 INPPL1O15357 1258 aa22.68■■□□□ 1.22
PNKP-201ENST00000322344 CCNT2O60583 730 aaKnown RBP22.68■■□□□ 1.22
PNKP-201ENST00000322344 MT-CYBP00156 380 aaPredicted RBP22.68■■□□□ 1.22
PNKP-201ENST00000322344 SLC25A3Q00325 362 aa22.68■■□□□ 1.22
PNKP-201ENST00000322344 USP4Q13107 963 aa22.68■■□□□ 1.22
PNKP-201ENST00000322344 KIRREL3Q8IZU9 778 aa22.68■■□□□ 1.22
PNKP-201ENST00000322344 RTL3Q8N8U3 475 aaKnown RBP22.68■■□□□ 1.22
PNKP-201ENST00000322344 SERPINB11Q96P15 392 aa22.68■■□□□ 1.22
PNKP-201ENST00000322344 SEPT4O43236 478 aa22.67■■□□□ 1.22
PNKP-201ENST00000322344 DDHD2O94830 711 aa22.67■■□□□ 1.22
PNKP-201ENST00000322344 AHSGP02765 367 aa22.67■■□□□ 1.22
PNKP-201ENST00000322344 NUMBP49757 651 aa22.67■■□□□ 1.22
PNKP-201ENST00000322344 TUBP50607 506 aa22.67■■□□□ 1.22
PNKP-201ENST00000322344 MRPS35P82673 323 aaKnown RBP22.67■■□□□ 1.22
PNKP-201ENST00000322344 YWHAHQ04917 246 aaPredicted RBP22.67■■□□□ 1.22
PNKP-201ENST00000322344 ASPHQ12797 758 aa22.67■■□□□ 1.22
PNKP-201ENST00000322344 ANO7Q6IWH7 933 aa22.67■■□□□ 1.22
PNKP-201ENST00000322344 SCD5Q86SK9 330 aa22.67■■□□□ 1.22
PNKP-201ENST00000322344 POU5F2Q8N7G0 328 aa22.67■■□□□ 1.22
PNKP-201ENST00000322344 ACTRT2Q8TDY3 377 aa22.67■■□□□ 1.22
PNKP-201ENST00000322344 STYXQ8WUJ0 223 aa22.67■■□□□ 1.22
PNKP-201ENST00000322344 FAM167BQ9BTA0 163 aa22.67■■□□□ 1.22
PNKP-201ENST00000322344 PRKD2Q9BZL6 878 aa22.67■■□□□ 1.22
PNKP-201ENST00000322344 TBC1D13Q9NVG8 400 aa22.67■■□□□ 1.22
PNKP-201ENST00000322344 RBM22Q9NW64 420 aaKnown RBP eCLIP22.67■■□□□ 1.224e-6■■■□□ 16.3
PNKP-201ENST00000322344 CPSF2Q9P2I0 782 aaKnown RBP22.67■■□□□ 1.22
PNKP-201ENST00000322344 SFMBT1Q9UHJ3 866 aa22.67■■□□□ 1.22
PNKP-201ENST00000322344 ACOT9Q9Y305 439 aa22.67■■□□□ 1.22
PNKP-201ENST00000322344 SHROOM3Q8TF72 1996 aa22.67■■□□□ 1.22
PNKP-201ENST00000322344 KCNU1A8MYU2 1149 aa22.67■■□□□ 1.22
PNKP-201ENST00000322344 SLCO1B7G3V0H7 640 aa22.67■■□□□ 1.22
PNKP-201ENST00000322344 SMNDC1O75940 238 aaKnown RBP eCLIP22.67■■□□□ 1.22
PNKP-201ENST00000322344 NEBLO76041 1014 aa22.67■■□□□ 1.22
PNKP-201ENST00000322344 SLC35E2BP0CK96 405 aa22.67■■□□□ 1.22
PNKP-201ENST00000322344 ANPEPP15144 967 aa22.67■■□□□ 1.22
PNKP-201ENST00000322344 CRABP2P29373 138 aa22.67■■□□□ 1.22
PNKP-201ENST00000322344 ARCN1P48444 511 aaKnown RBP22.67■■□□□ 1.22
PNKP-201ENST00000322344 BTKQ06187 659 aa22.67■■□□□ 1.22
PNKP-201ENST00000322344 POU6F1Q14863 301 aa22.67■■□□□ 1.22
PNKP-201ENST00000322344 SCYL1Q96KG9 808 aa22.67■■□□□ 1.22
PNKP-201ENST00000322344 C1orf74Q96LT6 269 aa22.67■■□□□ 1.22
PNKP-201ENST00000322344 OXCT2Q9BYC2 517 aaPredicted RBP22.67■■□□□ 1.22
PNKP-201ENST00000322344 CORO1CQ9ULV4 474 aaPredicted RBP22.67■■□□□ 1.22
PNKP-201ENST00000322344 RUVBL2Q9Y230 463 aaKnown RBP22.67■■□□□ 1.22
PNKP-201ENST00000322344 FNDC1Q4ZHG4 1894 aaPredicted RBP22.67■■□□□ 1.22
PNKP-201ENST00000322344 E9PAM4 449 aa22.66■■□□□ 1.22
PNKP-201ENST00000322344 MSI1O43347 362 aaKnown RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms