RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 L1CAMP32004 1257 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 ZNF235Q14590 738 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 DPYSL2Q16555 572 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 NEPROQ6NW34 567 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 RIOX2Q8IUF8 465 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 CNTD1Q8N815 330 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 FAM47BQ8NA70 645 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 CLK4Q9HAZ1 481 aaKnown RBP12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 PLGRKTQ9HBL7 147 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 CYTH4Q9UIA0 394 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 HES2Q9Y543 173 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 ADGRA2Q96PE1 1338 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 PABPC4LP0CB38 370 aaKnown RBP12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 ADSLP30566 484 aaPredicted RBP12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 SLC25A52Q3SY17 297 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 SLC9A4Q6AI14 798 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 KBTBD2Q8IY47 623 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.92□□□□□ -0.346e-7■■■■■ 47.1
DNMT3A-202ENST00000321117 FAM136AQ96C01 138 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 TBL1YQ9BQ87 522 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 BCO2Q9BYV7 579 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 ULBP1Q9BZM6 244 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 HAPLN2Q9GZV7 340 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 XYLT2Q9H1B5 865 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 NDUFAF1Q9Y375 327 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 ASB3Q9Y575 518 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 TTLL13PA6NNM8 815 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 TNPO2O14787 897 aaKnown RBP12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 CHRNGP07510 517 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 MYL3P08590 195 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 ARHGDIAP52565 204 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 DPYSQ14117 519 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 LPIN1Q14693 890 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 GRM3Q14832 879 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 FAM91A1Q658Y4 838 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 PRMT9Q6P2P2 845 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 FASTKD5Q7L8L6 764 aaKnown RBP12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 CHRAC1Q9NRG0 131 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 ADAMTS6Q9UKP5 1117 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 RRN3P2A6NIE6 340 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 E5RI56 91 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 RECQL4O94761 1208 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 BAIAP3O94812 1187 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 TPP2P29144 1249 aaPredicted RBP12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 CYP51A1Q16850 503 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 KCTD21Q4G0X4 260 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 ZNF772Q68DY9 489 aaPredicted RBP12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 HERC6Q8IVU3 1022 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 AHI1Q8N157 1196 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 AGAP2Q99490 1192 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 SEPHS2Q99611 448 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 GPR20Q99678 358 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 MRPL57Q9BQC6 102 aaKnown RBP12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 PRKD2Q9BZL6 878 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 FZD8Q9H461 694 aa12.92□□□□□ -0.34
DNMT3A-202ENST00000321117 A0A087X1B8 175 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 ATP6AP2A0A1C7CYW4 349 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 KCNU1A8MYU2 1149 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 DYNC1LI2O43237 492 aaPredicted RBP12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 ATP6AP2O75787 350 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 OR6B1O95007 311 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 AMHP03971 560 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 SLC7A2P52569 658 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 C21orf59P57076 290 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 RPL26P61254 145 aaKnown RBP12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 RALGDSQ12967 914 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 MTX3Q5HYI7 312 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 OTUD3Q5T2D3 398 aaPredicted RBP12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 LPGAT1Q92604 370 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 RMDN1Q96DB5 314 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 NOL11Q9H8H0 719 aaKnown RBP12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 EIF2B3Q9NR50 452 aaKnown RBP12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 TSR3Q9UJK0 312 aaKnown RBP12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 TELO2Q9Y4R8 837 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 AP2A1O95782 977 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 LGALS2P05162 132 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 PCYT1AP49585 367 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 MAP3K10Q02779 954 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 ATP1A4Q13733 1029 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 SLC10A6Q3KNW5 377 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 PPM1LQ5SGD2 360 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 TMEM198Q66K66 360 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 ZYG11AQ6WRX3 759 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 RIC8BQ9NVN3 520 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 OR12D3Q9UGF7 316 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 PSAT1Q9Y617 370 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 DPYSL4O14531 572 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 NDUFS3O75489 264 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 LDLRP01130 860 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 PYGLP06737 847 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 RXRBP28702 533 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 TTKP33981 857 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 MTTPP55157 894 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 CCNIQ14094 377 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 KLHDC10Q6PID8 442 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 EFL1Q7Z2Z2 1120 aaKnown RBP12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 CCDC117Q8IWD4 279 aaPredicted RBP12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 SKA2Q8WVK7 121 aaPredicted RBP12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 TCF12Q99081 682 aa12.91□□□□□ -0.34
DNMT3A-202ENST00000321117 PDLIM7Q9NR12 457 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms