RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 TNKS2Q9H2K2 1166 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 CAAP1Q9H8G2 361 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 ETNK2Q9NVF9 386 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 IRS2Q9Y4H2 1338 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 E9PBE3 544 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 KLHL41O60662 606 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 ERCC2P18074 760 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 NFKB1P19838 968 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 MAT2AP31153 395 aaKnown RBP13.67□□□□□ -0.22
RFFL-201ENST00000315249 RPL7AP62424 266 aaKnown RBP13.67□□□□□ -0.22
RFFL-201ENST00000315249 DPYSL3Q14195 570 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 ATP13A4Q4VNC1 1196 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 KLHL5Q96PQ7 755 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 PCDHGA4Q9Y5G9 962 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.67□□□□□ -0.22
RFFL-201ENST00000315249 SYN3O14994 580 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 B4GALT4O60513 344 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 POU1F1P28069 291 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 RRM2P31350 389 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 FAM71AQ8IYT1 594 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 NRSN1Q8IZ57 195 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 ALLCQ8N6M5 410 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 ST13P5Q8NFI4 369 aaPredicted RBP13.67□□□□□ -0.22
RFFL-201ENST00000315249 GLMNQ92990 594 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 FBXO6Q9NRD1 293 aaPredicted RBP13.67□□□□□ -0.22
RFFL-201ENST00000315249 RAB30Q15771 203 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 C2orf27AQ580R0 203 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 INTS6LQ5JSJ4 861 aaKnown RBP13.67□□□□□ -0.22
RFFL-201ENST00000315249 PRDM12Q9H4Q4 367 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 ASF1AQ9Y294 204 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 A0A096LPK6 155 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.67□□□□□ -0.22
RFFL-201ENST00000315249 UGT2B4P06133 528 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 PLOD1Q02809 727 aaPredicted RBP13.67□□□□□ -0.22
RFFL-201ENST00000315249 OCA2Q04671 838 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 MBTD1Q05BQ5 628 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 ZCCHC8Q6NZY4 707 aaKnown RBP13.67□□□□□ -0.22
RFFL-201ENST00000315249 CNKSR3Q6P9H4 555 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 SLC41A1Q8IVJ1 513 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 BTN2A3PQ96KV6 586 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 CCT8L2Q96SF2 557 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 CLIC5Q9NZA1 410 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 FTH1P02794 183 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 RRP1BQ14684 758 aaKnown RBP13.67□□□□□ -0.22
RFFL-201ENST00000315249 PAGE2BQ5JRK9 111 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 N4BP2L1Q5TBK1 243 aaPredicted RBP13.67□□□□□ -0.22
RFFL-201ENST00000315249 NEPROQ6NW34 567 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 OXCT2Q9BYC2 517 aaPredicted RBP13.67□□□□□ -0.22
RFFL-201ENST00000315249 CACNG4Q9UBN1 327 aa13.67□□□□□ -0.22
RFFL-201ENST00000315249 H0Y858 1186 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 WNT7AO00755 349 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 HERVK_113Q902F9 699 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 FANCEQ9HB96 536 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 PRKAG3Q9UGI9 489 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 A0A0A0MRY4 1105 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 SCAMP1O15126 338 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 ZNF473Q8WTR7 871 aaKnown RBP13.66□□□□□ -0.22
RFFL-201ENST00000315249 PCED1BQ96HM7 432 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 MFSD14AQ96MC6 490 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 SPATA13Q96N96 652 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 PHGDHO43175 533 aaKnown RBP13.66□□□□□ -0.22
RFFL-201ENST00000315249 ERBB2P04626 1255 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 UBE3AQ05086 875 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 PKN2Q16513 984 aaKnown RBP13.66□□□□□ -0.22
RFFL-201ENST00000315249 C2orf73Q8N5S3 287 aaPredicted RBP13.66□□□□□ -0.22
RFFL-201ENST00000315249 TXNRD2Q9NNW7 524 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 CHKBQ9Y259 395 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 A0A1W2PRU2 124 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 ATP6V1C1P21283 382 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 AGKQ53H12 422 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.66□□□□□ -0.22
RFFL-201ENST00000315249 LRP10Q7Z4F1 713 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 CYP4Z1Q86W10 505 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 PHYKPLQ8IUZ5 450 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 OR56A4Q8NGH8 313 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 USE1Q9NZ43 259 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 POLG2Q9UHN1 485 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 DNALI1O14645 258 aaPredicted RBP13.66□□□□□ -0.22
RFFL-201ENST00000315249 SLC31A1O15431 190 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 FSBPO95073 299 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 ARL2P36404 184 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 COPAP53621 1224 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 LILRA4P59901 499 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 PEX6Q13608 980 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 PFKFB4Q16877 469 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 NDNQ99608 321 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 ACAT2Q9BWD1 397 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 STARD13Q9Y3M8 1113 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 CPQQ9Y646 472 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 CCDC88AQ3V6T2 1871 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 BGNP21810 368 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 SLC25A52Q3SY17 297 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 DNAJC18Q9H819 358 aa13.66□□□□□ -0.22
RFFL-201ENST00000315249 DAB1O75553 588 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 CFIP05156 583 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 FGRP09769 529 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 CYLC2Q14093 348 aaPredicted RBP13.65□□□□□ -0.22
RFFL-201ENST00000315249 KBTBD12Q3ZCT8 623 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 RNF157Q96PX1 679 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 LGMNQ99538 433 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms