RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 A0A087X0T9 212 aa14.89□□□□□ -0.03
PPP1CA-201ENST00000312989 FAM47DPA6NHR8 397 aa14.89□□□□□ -0.03
PPP1CA-201ENST00000312989 OPHN1O60890 802 aa14.89□□□□□ -0.03
PPP1CA-201ENST00000312989 CBFA2T3O75081 653 aa14.89□□□□□ -0.03
PPP1CA-201ENST00000312989 LRCH4O75427 683 aa14.89□□□□□ -0.03
PPP1CA-201ENST00000312989 FAM228BP0C875 321 aa14.89□□□□□ -0.03
PPP1CA-201ENST00000312989 PSMA2P25787 234 aa14.89□□□□□ -0.03
PPP1CA-201ENST00000312989 EPHB2P29323 1055 aa14.89□□□□□ -0.03
PPP1CA-201ENST00000312989 CTSKP43235 329 aa14.89□□□□□ -0.03
PPP1CA-201ENST00000312989 AFF3P51826 1226 aaKnown RBP14.89□□□□□ -0.03
PPP1CA-201ENST00000312989 SLC20A2Q08357 652 aa14.89□□□□□ -0.03
PPP1CA-201ENST00000312989 SKOR2Q2VWA4 1001 aaPredicted RBP14.89□□□□□ -0.03
PPP1CA-201ENST00000312989 HLA-BQ31612 363 aa14.89□□□□□ -0.03
PPP1CA-201ENST00000312989 EFHC2Q5JST6 749 aa14.89□□□□□ -0.03
PPP1CA-201ENST00000312989 RETSATQ6NUM9 610 aa14.89□□□□□ -0.03
PPP1CA-201ENST00000312989 SCYL2Q6P3W7 929 aa14.89□□□□□ -0.03
PPP1CA-201ENST00000312989 OR14C36Q8NHC7 312 aa14.89□□□□□ -0.03
PPP1CA-201ENST00000312989 GANCQ8TET4 914 aa14.89□□□□□ -0.03
PPP1CA-201ENST00000312989 ISG20Q96AZ6 181 aaKnown RBP14.89□□□□□ -0.03
PPP1CA-201ENST00000312989 ZNF653Q96CK0 615 aa14.89□□□□□ -0.03
PPP1CA-201ENST00000312989 SNRNP25Q9BV90 132 aaKnown RBP14.89□□□□□ -0.03
PPP1CA-201ENST00000312989 MAGEH1Q9H213 219 aa14.89□□□□□ -0.03
PPP1CA-201ENST00000312989 KDM4CQ9H3R0 1056 aa14.89□□□□□ -0.03
PPP1CA-201ENST00000312989 LRRC19Q9H756 370 aa14.89□□□□□ -0.03
PPP1CA-201ENST00000312989 PDFQ9HBH1 243 aa14.89□□□□□ -0.03
PPP1CA-201ENST00000312989 SNX11Q9Y5W9 270 aa14.89□□□□□ -0.03
PPP1CA-201ENST00000312989 ASCC3Q8N3C0 2202 aaKnown RBP14.89□□□□□ -0.03
PPP1CA-201ENST00000312989 LRRC72A6NJI9 287 aa14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 SPINT1O43278 529 aa14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 BNIP3LO60238 219 aa14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 RAMP2O60895 175 aa14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 LEFTY1O75610 366 aa14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 ZNF883P0CG24 379 aa14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 IL1R2P27930 398 aa14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 MIPP30301 263 aa14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 CCNHP51946 323 aaPredicted RBP14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 RACK1P63244 317 aaKnown RBP14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 SLC14A1Q13336 389 aa14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 SHBQ15464 509 aa14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 ASTE1Q2TB18 679 aaPredicted RBP14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 FAM46CQ5VWP2 391 aa14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 AFMIDQ63HM1 303 aa14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 LEKR1Q6ZMV7 388 aa14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 DSG4Q86SJ6 1040 aa14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 TRIM69Q86WT6 500 aa14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 PLPP6Q8IY26 295 aa14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 UMODL1-AS1Q8N2C9 162 aa14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 PCDH20Q8N6Y1 951 aaKnown RBP14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 BAHD1Q8TBE0 780 aaPredicted RBP14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 ARHGEF26Q96DR7 871 aa14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 HMCESQ96FZ2 354 aa14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 CAMK1GQ96NX5 476 aa14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 KCTD15Q96SI1 283 aaPredicted RBP14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 THAP2Q9H0W7 228 aa14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 AP4E1Q9UPM8 1137 aa14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 PI4KAP42356 2102 aa14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 ADAMTS9Q9P2N4 1935 aa14.88□□□□□ -0.03
PPP1CA-201ENST00000312989 C1QTNF3-AMACRE9PGA6 284 aa14.87□□□□□ -0.03
PPP1CA-201ENST00000312989 GOLGA6L19H0YKK7 550 aa14.87□□□□□ -0.03
PPP1CA-201ENST00000312989 VILLO15195 856 aa14.87□□□□□ -0.03
PPP1CA-201ENST00000312989 KDELR3O43731 214 aa14.87□□□□□ -0.03
PPP1CA-201ENST00000312989 CREB3O43889 395 aa14.87□□□□□ -0.03
PPP1CA-201ENST00000312989 SH3BP5O60239 455 aa14.87□□□□□ -0.03
PPP1CA-201ENST00000312989 SERPING1P05155 500 aa14.87□□□□□ -0.03
PPP1CA-201ENST00000312989 CASP14P31944 242 aa14.87□□□□□ -0.03
PPP1CA-201ENST00000312989 GKP32189 559 aa14.87□□□□□ -0.03
PPP1CA-201ENST00000312989 TPM4P67936 248 aa14.87□□□□□ -0.03
PPP1CA-201ENST00000312989 SHC2P98077 582 aa14.87□□□□□ -0.03
PPP1CA-201ENST00000312989 POLD3Q15054 466 aaPredicted RBP14.87□□□□□ -0.03
PPP1CA-201ENST00000312989 ZNF423Q2M1K9 1284 aa14.87□□□□□ -0.03
PPP1CA-201ENST00000312989 CARD16Q5EG05 197 aa14.87□□□□□ -0.03
PPP1CA-201ENST00000312989 ARSIQ5FYB1 569 aa14.87□□□□□ -0.03
PPP1CA-201ENST00000312989 TXNRD3NBQ6F5E7 133 aa14.87□□□□□ -0.03
PPP1CA-201ENST00000312989 LRSAM1Q6UWE0 723 aa14.87□□□□□ -0.03
PPP1CA-201ENST00000312989 ARHGAP12Q8IWW6 846 aa14.87□□□□□ -0.03
PPP1CA-201ENST00000312989 NPWQ8N729 165 aa14.87□□□□□ -0.03
PPP1CA-201ENST00000312989 GRIN3AQ8TCU5 1115 aa14.87□□□□□ -0.03
PPP1CA-201ENST00000312989 CPLX3Q8WVH0 158 aa14.87□□□□□ -0.03
PPP1CA-201ENST00000312989 IQCDQ96DY2 449 aa14.87□□□□□ -0.03
PPP1CA-201ENST00000312989 HDAC8Q9BY41 377 aa14.87□□□□□ -0.03
PPP1CA-201ENST00000312989 GAREM1Q9H706 876 aa14.87□□□□□ -0.03
PPP1CA-201ENST00000312989 IL36AQ9UHA7 158 aa14.87□□□□□ -0.03
PPP1CA-201ENST00000312989 ANKRD6Q9Y2G4 727 aa14.87□□□□□ -0.03
PPP1CA-201ENST00000312989 ANKRD62A6NC57 917 aa14.86□□□□□ -0.03
PPP1CA-201ENST00000312989 RASA4BC9J798 803 aa14.86□□□□□ -0.03
PPP1CA-201ENST00000312989 KCNK3O14649 394 aa14.86□□□□□ -0.03
PPP1CA-201ENST00000312989 RASA4O43374 803 aa14.86□□□□□ -0.03
PPP1CA-201ENST00000312989 TOP3BO95985 862 aaKnown RBP14.86□□□□□ -0.03
PPP1CA-201ENST00000312989 CYP1A2P05177 515 aa14.86□□□□□ -0.03
PPP1CA-201ENST00000312989 MYBL1P10243 752 aa14.86□□□□□ -0.03
PPP1CA-201ENST00000312989 ETFBP38117 255 aa14.86□□□□□ -0.03
PPP1CA-201ENST00000312989 ATXN3P54252 364 aaPredicted RBP14.86□□□□□ -0.03
PPP1CA-201ENST00000312989 SFSWAPQ12872 951 aaKnown RBP14.86□□□□□ -0.03
PPP1CA-201ENST00000312989 SERINC3Q13530 473 aa14.86□□□□□ -0.03
PPP1CA-201ENST00000312989 TDRD12Q587J7 1177 aaKnown RBP14.86□□□□□ -0.03
PPP1CA-201ENST00000312989 TMEM145Q8NBT3 493 aa14.86□□□□□ -0.03
PPP1CA-201ENST00000312989 NETO2Q8NC67 525 aa14.86□□□□□ -0.03
PPP1CA-201ENST00000312989 EPAS1Q99814 870 aa14.86□□□□□ -0.03
PPP1CA-201ENST00000312989 TM6SF2Q9BZW4 377 aa14.86□□□□□ -0.03
PPP1CA-201ENST00000312989 PREBQ9HCU5 417 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms