RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 ATP13A1Q9HD20 1204 aa19.74■□□□□ 0.75
HOXC4-201ENST00000303406 CHRAC1Q9NRG0 131 aa19.74■□□□□ 0.75
HOXC4-201ENST00000303406 UBP1Q9NZI7 540 aa19.74■□□□□ 0.75
HOXC4-201ENST00000303406 TCAF1Q9Y4C2 921 aa19.74■□□□□ 0.75
HOXC4-201ENST00000303406 H0YHG0 523 aa19.73■□□□□ 0.75
HOXC4-201ENST00000303406 ADAM12O43184 909 aa19.73■□□□□ 0.75
HOXC4-201ENST00000303406 RAMP2O60895 175 aa19.73■□□□□ 0.75
HOXC4-201ENST00000303406 SIN3BO75182 1162 aa19.73■□□□□ 0.75
HOXC4-201ENST00000303406 ATP5HO75947 161 aa19.73■□□□□ 0.75
HOXC4-201ENST00000303406 MT-CYBP00156 380 aaPredicted RBP19.73■□□□□ 0.75
HOXC4-201ENST00000303406 NEFHP12036 1026 aa19.73■□□□□ 0.75
HOXC4-201ENST00000303406 OR1D2P34982 312 aa19.73■□□□□ 0.75
HOXC4-201ENST00000303406 POLD2P49005 469 aa19.73■□□□□ 0.75
HOXC4-201ENST00000303406 DSG1Q02413 1049 aa19.73■□□□□ 0.75
HOXC4-201ENST00000303406 SF3A3Q12874 501 aaKnown RBP eCLIP19.73■□□□□ 0.75
HOXC4-201ENST00000303406 PDE1CQ14123 709 aaPredicted RBP19.73■□□□□ 0.75
HOXC4-201ENST00000303406 MARC1Q5VT66 337 aa19.73■□□□□ 0.75
HOXC4-201ENST00000303406 STRA8Q7Z7C7 330 aa19.73■□□□□ 0.75
HOXC4-201ENST00000303406 SLC39A11Q8N1S5 342 aa19.73■□□□□ 0.75
HOXC4-201ENST00000303406 TOP1MTQ969P6 601 aa19.73■□□□□ 0.75
HOXC4-201ENST00000303406 E2F7Q96AV8 911 aa19.73■□□□□ 0.75
HOXC4-201ENST00000303406 TADA1Q96BN2 335 aa19.73■□□□□ 0.75
HOXC4-201ENST00000303406 PLD4Q96BZ4 506 aa19.73■□□□□ 0.75
HOXC4-201ENST00000303406 ZNF689Q96CS4 500 aaPredicted RBP19.73■□□□□ 0.75
HOXC4-201ENST00000303406 ZNF599Q96NL3 588 aa19.73■□□□□ 0.75
HOXC4-201ENST00000303406 CCSER2Q9H7U1 834 aa19.73■□□□□ 0.75
HOXC4-201ENST00000303406 C20orf96Q9NUD7 363 aaPredicted RBP19.73■□□□□ 0.75
HOXC4-201ENST00000303406 SLC17A6Q9P2U8 582 aa19.73■□□□□ 0.75
HOXC4-201ENST00000303406 MAFFQ9ULX9 164 aa19.73■□□□□ 0.75
HOXC4-201ENST00000303406 HTTP42858 3142 aa19.73■□□□□ 0.75
HOXC4-201ENST00000303406 F5H5T6 163 aa19.72■□□□□ 0.75
HOXC4-201ENST00000303406 ACSL4O60488 711 aa19.72■□□□□ 0.75
HOXC4-201ENST00000303406 DNAJB1P25685 340 aa19.72■□□□□ 0.75
HOXC4-201ENST00000303406 NMBRP28336 390 aa19.72■□□□□ 0.75
HOXC4-201ENST00000303406 PPP3CCP48454 512 aa19.72■□□□□ 0.75
HOXC4-201ENST00000303406 UGP2Q16851 508 aa19.72■□□□□ 0.75
HOXC4-201ENST00000303406 NADSYN1Q6IA69 706 aa19.72■□□□□ 0.75
HOXC4-201ENST00000303406 KIAA1841Q6NSI8 718 aa19.72■□□□□ 0.75
HOXC4-201ENST00000303406 TFAP2DQ7Z6R9 452 aa19.72■□□□□ 0.75
HOXC4-201ENST00000303406 LCA5Q86VQ0 697 aa19.72■□□□□ 0.75
HOXC4-201ENST00000303406 NUDCD3Q8IVD9 361 aa19.72■□□□□ 0.75
HOXC4-201ENST00000303406 GPR65Q8IYL9 337 aa19.72■□□□□ 0.75
HOXC4-201ENST00000303406 ZNF461Q8TAF7 563 aa19.72■□□□□ 0.75
HOXC4-201ENST00000303406 VWCEQ96DN2 955 aa19.72■□□□□ 0.75
HOXC4-201ENST00000303406 TRMT2BQ96GJ1 504 aaKnown RBP19.72■□□□□ 0.75
HOXC4-201ENST00000303406 ZNF558Q96NG5 402 aa19.72■□□□□ 0.75
HOXC4-201ENST00000303406 RPRD1AQ96P16 312 aaPredicted RBP19.72■□□□□ 0.75
HOXC4-201ENST00000303406 CLSTN3Q9BQT9 956 aa19.72■□□□□ 0.75
HOXC4-201ENST00000303406 BEGAINQ9BUH8 593 aa19.72■□□□□ 0.75
HOXC4-201ENST00000303406 FSD1LQ9BXM9 530 aa19.72■□□□□ 0.75
HOXC4-201ENST00000303406 RC3H2Q9HBD1 1191 aaKnown RBP19.72■□□□□ 0.75
HOXC4-201ENST00000303406 ZNF840PA6NDX5 716 aa19.71■□□□□ 0.75
HOXC4-201ENST00000303406 PLIN3O60664 434 aa19.71■□□□□ 0.75
HOXC4-201ENST00000303406 EFCAB14O75071 495 aa19.71■□□□□ 0.75
HOXC4-201ENST00000303406 TPH1P17752 444 aa19.71■□□□□ 0.75
HOXC4-201ENST00000303406 PAMP19021 973 aa19.71■□□□□ 0.75
HOXC4-201ENST00000303406 TYK2P29597 1187 aa19.71■□□□□ 0.75
HOXC4-201ENST00000303406 SERINC3Q13530 473 aa19.71■□□□□ 0.75
HOXC4-201ENST00000303406 POLD3Q15054 466 aaPredicted RBP19.71■□□□□ 0.75
HOXC4-201ENST00000303406 HSP90AA5PQ58FG0 334 aa19.71■□□□□ 0.75
HOXC4-201ENST00000303406 HECTD3Q5T447 861 aa19.71■□□□□ 0.75
HOXC4-201ENST00000303406 KIAA0930Q6ICG6 404 aaPredicted RBP19.71■□□□□ 0.75
HOXC4-201ENST00000303406 DCLK2Q8N568 766 aa19.71■□□□□ 0.75
HOXC4-201ENST00000303406 MTO1Q9Y2Z2 717 aaKnown RBP19.71■□□□□ 0.75
HOXC4-201ENST00000303406 DNAH12Q6ZR08 3092 aa19.71■□□□□ 0.75
HOXC4-201ENST00000303406 PCNTO95613 3336 aa19.71■□□□□ 0.75
HOXC4-201ENST00000303406 SNNO75324 88 aaPredicted RBP19.71■□□□□ 0.75
HOXC4-201ENST00000303406 UPP2O95045 317 aa19.71■□□□□ 0.75
HOXC4-201ENST00000303406 HMGA1P17096 107 aaKnown RBP19.71■□□□□ 0.75
HOXC4-201ENST00000303406 LAG3P18627 525 aa19.71■□□□□ 0.75
HOXC4-201ENST00000303406 SLC11A2P49281 568 aa19.71■□□□□ 0.75
HOXC4-201ENST00000303406 CSRP3P50461 194 aa19.71■□□□□ 0.75
HOXC4-201ENST00000303406 WNT3AP56704 352 aa19.71■□□□□ 0.75
HOXC4-201ENST00000303406 HTRA3P83110 453 aa19.71■□□□□ 0.75
HOXC4-201ENST00000303406 BTG3Q14201 252 aaPredicted RBP19.71■□□□□ 0.75
HOXC4-201ENST00000303406 SLC14A2Q15849 920 aa19.71■□□□□ 0.75
HOXC4-201ENST00000303406 CCDC153Q494R4 210 aa19.71■□□□□ 0.75
HOXC4-201ENST00000303406 CMTR2Q8IYT2 770 aaKnown RBP19.71■□□□□ 0.75
HOXC4-201ENST00000303406 ANKLE1Q8NAG6 615 aa19.71■□□□□ 0.75
HOXC4-201ENST00000303406 LRRC37BQ96QE4 947 aa19.71■□□□□ 0.75
HOXC4-201ENST00000303406 ALG13Q9NP73 1137 aaKnown RBP19.71■□□□□ 0.75
HOXC4-201ENST00000303406 SNX15Q9NRS6 342 aa19.71■□□□□ 0.75
HOXC4-201ENST00000303406 TREX1Q9NSU2 369 aa19.71■□□□□ 0.75
HOXC4-201ENST00000303406 TMEM39AQ9NV64 488 aa19.71■□□□□ 0.75
HOXC4-201ENST00000303406 TRPM5Q9NZQ8 1165 aa19.71■□□□□ 0.75
HOXC4-201ENST00000303406 EMCNQ9ULC0 261 aa19.71■□□□□ 0.75
HOXC4-201ENST00000303406 MAGED2Q9UNF1 606 aaPredicted RBP19.71■□□□□ 0.75
HOXC4-201ENST00000303406 CHKBQ9Y259 395 aa19.71■□□□□ 0.75
HOXC4-201ENST00000303406 J3KR12 359 aa19.7■□□□□ 0.74
HOXC4-201ENST00000303406 PRAMEF11O60813 436 aa19.7■□□□□ 0.74
HOXC4-201ENST00000303406 PAPSS2O95340 614 aaPredicted RBP19.7■□□□□ 0.74
HOXC4-201ENST00000303406 MYCP01106 439 aaPredicted RBP19.7■□□□□ 0.74
HOXC4-201ENST00000303406 HMBSP08397 361 aa19.7■□□□□ 0.74
HOXC4-201ENST00000303406 CLTBP09497 229 aa19.7■□□□□ 0.74
HOXC4-201ENST00000303406 HARS2P49590 506 aaKnown RBP19.7■□□□□ 0.74
HOXC4-201ENST00000303406 NCALDP61601 193 aa19.7■□□□□ 0.74
HOXC4-201ENST00000303406 OCRLQ01968 901 aa19.7■□□□□ 0.74
HOXC4-201ENST00000303406 FAM133BQ5BKY9 247 aaKnown RBP19.7■□□□□ 0.74
HOXC4-201ENST00000303406 N4BP2L1Q5TBK1 243 aaPredicted RBP19.7■□□□□ 0.74
HOXC4-201ENST00000303406 TMCO4Q5TGY1 634 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms