RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 LRRC4CQ9HCJ2 640 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.33□□□□□ -0.76
GABRB3-201ENST00000299267 DNAJC16Q9Y2G8 782 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 A0A1B0GUL6 1792 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 TIAM2Q8IVF5 1701 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 A0A1W2PPM1 405 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 GNGT2O14610 69 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 CHADO15335 359 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 GLRA3O75311 464 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 KATNA1O75449 491 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 UGT2B4P06133 528 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 HSPA1AP0DMV8 641 aaKnown RBP10.33□□□□□ -0.76
GABRB3-201ENST00000299267 HSPA1BP0DMV9 641 aaKnown RBP10.33□□□□□ -0.76
GABRB3-201ENST00000299267 TSPAN8P19075 237 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 PAX3P23760 479 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 L1CAMP32004 1257 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 GRIA1P42261 906 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 CAPRIN1Q14444 709 aaKnown RBP10.33□□□□□ -0.76
GABRB3-201ENST00000299267 RTP2Q5QGT7 225 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 ZNF567Q8N184 647 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 C12orf76Q8N812 135 aaPredicted RBP10.33□□□□□ -0.76
GABRB3-201ENST00000299267 SLC22A17Q8WUG5 538 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 ASB8Q9H765 288 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.33□□□□□ -0.76
GABRB3-201ENST00000299267 TRIOBPQ9H2D6 2365 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 LAMA4Q16363 1823 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 ACADMP11310 421 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 MZF1P28698 734 aaPredicted RBP10.33□□□□□ -0.76
GABRB3-201ENST00000299267 RPA3P35244 121 aaPredicted RBP10.33□□□□□ -0.76
GABRB3-201ENST00000299267 CDK18Q07002 472 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 INCA1Q0VD86 236 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 OLIG2Q13516 323 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 FNBP1LQ5T0N5 605 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 UBXN11Q5T124 520 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 FBXO46Q6PJ61 603 aaPredicted RBP10.33□□□□□ -0.76
GABRB3-201ENST00000299267 C15orf39Q6ZRI6 1047 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 CERS2Q96G23 380 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 CAB39LQ9H9S4 337 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 GLOD4Q9HC38 313 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 TRIM33Q9UPN9 1127 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 SHANK3Q9BYB0 1731 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 PDZK1P1A8MUH7 402 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 IRAK2O43187 625 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 TSNAXIP1Q2TAA8 658 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 TMCO4Q5TGY1 634 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 C1orf146Q5VVC0 180 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 KDM7AQ6ZMT4 941 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 TRMT11Q7Z4G4 463 aaKnown RBP10.33□□□□□ -0.76
GABRB3-201ENST00000299267 TNS4Q8IZW8 715 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 RSRC1Q96IZ7 334 aaKnown RBP10.33□□□□□ -0.76
GABRB3-201ENST00000299267 EBNA1BP2Q99848 306 aaKnown RBP10.33□□□□□ -0.76
GABRB3-201ENST00000299267 FAM167BQ9BTA0 163 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 SLC39A8Q9C0K1 460 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 IL22Q9GZX6 179 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 BRD9Q9H8M2 597 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 PPCSQ9HAB8 311 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 HEY2Q9UBP5 337 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 BCAP29Q9UHQ4 241 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 FBXL21Q9UKT6 434 aa10.33□□□□□ -0.76
GABRB3-201ENST00000299267 FCF1Q9Y324 198 aaKnown RBP10.33□□□□□ -0.76
GABRB3-201ENST00000299267 MAGEB16A2A368 324 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 MTMR11A4FU01 709 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 FANCGO15287 622 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 ZNF623O75123 536 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 FAM107AO95990 144 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 GBP7Q8N8V2 638 aaPredicted RBP10.32□□□□□ -0.76
GABRB3-201ENST00000299267 KLHL23Q8NBE8 558 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 C3orf58Q8NDZ4 430 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 POF1BQ8WVV4 589 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 FUBP3Q96I24 572 aaKnown RBP eCLIP10.32□□□□□ -0.76
GABRB3-201ENST00000299267 PPP1R10Q96QC0 940 aaKnown RBP10.32□□□□□ -0.76
GABRB3-201ENST00000299267 EML4Q9HC35 981 aaKnown RBP10.32□□□□□ -0.76
GABRB3-201ENST00000299267 EVPLQ92817 2033 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 MEFVO15553 781 aaPredicted RBP10.32□□□□□ -0.76
GABRB3-201ENST00000299267 PROZP22891 400 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 SMARCB1Q12824 385 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 TTLL9Q3SXZ7 439 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 SLC41A1Q8IVJ1 513 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 TUBGCP3Q96CW5 907 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 IGSF21Q96ID5 467 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 ILKAPQ9H0C8 392 aaPredicted RBP10.32□□□□□ -0.76
GABRB3-201ENST00000299267 DCDC2Q9UHG0 476 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 FZD10Q9ULW2 581 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 USH1CQ9Y6N9 552 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 E9PBE3 544 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 MYO1CO00159 1063 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 TPP1O14773 563 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 KLHL41O60662 606 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 CLDN11O75508 207 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 METTL18O95568 372 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 LRPAP1P30533 357 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 AQP5P55064 265 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 SNRPD1P62314 119 aaKnown RBP10.32□□□□□ -0.76
GABRB3-201ENST00000299267 MOGSQ13724 837 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 PCID2Q5JVF3 399 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 ATXN7L2Q5T6C5 722 aaPredicted RBP10.32□□□□□ -0.76
GABRB3-201ENST00000299267 FBXL22Q6P050 247 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 KIAA1324Q6UXG2 1013 aaKnown RBP10.32□□□□□ -0.76
GABRB3-201ENST00000299267 LRRTM3Q86VH5 581 aa10.32□□□□□ -0.76
GABRB3-201ENST00000299267 ZNF461Q8TAF7 563 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms