RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 SGSHP51688 502 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 GEMP55040 296 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 GNGT1P63211 74 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 GUCY1A3Q02108 690 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 GNA12Q03113 381 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 SLC10A7Q0GE19 358 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 C9orf50Q5SZB4 431 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 MARC1Q5VT66 337 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 AP1ARQ63HQ0 302 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 FAM217AQ8IXS0 508 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 SPATA22Q8NHS9 363 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 ZNF483Q8TF39 744 aaPredicted RBP15.82■□□□□ 0.12
LSM6-201ENST00000296581 TRIM56Q9BRZ2 755 aaKnown RBP15.82■□□□□ 0.12
LSM6-201ENST00000296581 SLC25A51Q9H1U9 297 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 PDFQ9HBH1 243 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 ASAH2Q9NR71 780 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 PIH1D1Q9NWS0 290 aaKnown RBP15.82■□□□□ 0.12
LSM6-201ENST00000296581 MOCS1Q9NZB8 636 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 ATXN2Q99700 1313 aaKnown RBP15.81■□□□□ 0.12
LSM6-201ENST00000296581 CCL16O15467 120 aa15.81■□□□□ 0.12
LSM6-201ENST00000296581 ALDH1A2O94788 518 aa15.81■□□□□ 0.12
LSM6-201ENST00000296581 FSBPO95073 299 aa15.81■□□□□ 0.12
LSM6-201ENST00000296581 CSPG5O95196 566 aa15.81■□□□□ 0.12
LSM6-201ENST00000296581 NPY2RP49146 381 aa15.81■□□□□ 0.12
LSM6-201ENST00000296581 EPHA5P54756 1037 aa15.81■□□□□ 0.12
LSM6-201ENST00000296581 CRADDP78560 199 aa15.81■□□□□ 0.12
LSM6-201ENST00000296581 SETD3Q86TU7 594 aaPredicted RBP15.81■□□□□ 0.12
LSM6-201ENST00000296581 OR52K2Q8NGK3 314 aa15.81■□□□□ 0.12
LSM6-201ENST00000296581 MICAL1Q8TDZ2 1067 aa15.81■□□□□ 0.12
LSM6-201ENST00000296581 NSMCE1Q8WV22 266 aa15.81■□□□□ 0.12
LSM6-201ENST00000296581 PABPC5Q96DU9 382 aaKnown RBP15.81■□□□□ 0.12
LSM6-201ENST00000296581 GCNAQ96QF7 691 aa15.81■□□□□ 0.12
LSM6-201ENST00000296581 CORO1BQ9BR76 489 aa15.81■□□□□ 0.12
LSM6-201ENST00000296581 ATXN3LQ9H3M9 355 aa15.81■□□□□ 0.12
LSM6-201ENST00000296581 UBP1Q9NZI7 540 aa15.81■□□□□ 0.12
LSM6-201ENST00000296581 BFARQ9NZS9 450 aa15.81■□□□□ 0.12
LSM6-201ENST00000296581 TBC1D30Q9Y2I9 924 aa15.81■□□□□ 0.12
LSM6-201ENST00000296581 HELZP42694 1942 aaKnown RBP15.81■□□□□ 0.12
LSM6-201ENST00000296581 ILVBLA1L0T0 632 aa15.8■□□□□ 0.12
LSM6-201ENST00000296581 FAM159BA6NKW6 160 aa15.8■□□□□ 0.12
LSM6-201ENST00000296581 GRXCR1A8MXD5 290 aa15.8■□□□□ 0.12
LSM6-201ENST00000296581 FOXO6A8MYZ6 492 aa15.8■□□□□ 0.12
LSM6-201ENST00000296581 NRG2O14511 850 aaPredicted RBP15.8■□□□□ 0.12
LSM6-201ENST00000296581 PIAS1O75925 651 aa15.8■□□□□ 0.12
LSM6-201ENST00000296581 MT-CYBP00156 380 aaPredicted RBP15.8■□□□□ 0.12
LSM6-201ENST00000296581 CREB1P16220 341 aa15.8■□□□□ 0.12
LSM6-201ENST00000296581 HOXD9P28356 352 aaPredicted RBP15.8■□□□□ 0.12
LSM6-201ENST00000296581 HOXA9P31269 272 aa15.8■□□□□ 0.12
LSM6-201ENST00000296581 ADRA1AP35348 466 aa15.8■□□□□ 0.12
LSM6-201ENST00000296581 CDH17Q12864 832 aa15.8■□□□□ 0.12
LSM6-201ENST00000296581 FAM109BQ6ICB4 259 aaPredicted RBP15.8■□□□□ 0.12
LSM6-201ENST00000296581 CASC4Q6P4E1 433 aa15.8■□□□□ 0.12
LSM6-201ENST00000296581 ZNF354CQ86Y25 554 aa15.8■□□□□ 0.12
LSM6-201ENST00000296581 MAB21L3Q8N8X9 362 aa15.8■□□□□ 0.12
LSM6-201ENST00000296581 MZB1Q8WU39 189 aa15.8■□□□□ 0.12
LSM6-201ENST00000296581 IMP4Q96G21 291 aaKnown RBP15.8■□□□□ 0.12
LSM6-201ENST00000296581 ZNF599Q96NL3 588 aa15.8■□□□□ 0.12
LSM6-201ENST00000296581 SAMD11Q96NU1 681 aa15.8■□□□□ 0.12
LSM6-201ENST00000296581 SELENOSQ9BQE4 189 aa15.8■□□□□ 0.12
LSM6-201ENST00000296581 SENP1Q9P0U3 644 aa15.8■□□□□ 0.12
LSM6-201ENST00000296581 TRAV19A0A0A6YYK7 116 aa15.8■□□□□ 0.12
LSM6-201ENST00000296581 A0A0D9SEW6 157 aa15.8■□□□□ 0.12
LSM6-201ENST00000296581 A0A1W2PRU2 124 aa15.8■□□□□ 0.12
LSM6-201ENST00000296581 CLASP2O75122 1294 aaKnown RBP15.8■□□□□ 0.12
LSM6-201ENST00000296581 MYL4P12829 197 aa15.8■□□□□ 0.12
LSM6-201ENST00000296581 TMCO4Q5TGY1 634 aa15.8■□□□□ 0.12
LSM6-201ENST00000296581 TRMT10BQ6PF06 316 aaKnown RBP15.8■□□□□ 0.12
LSM6-201ENST00000296581 SRRM1Q8IYB3 904 aaKnown RBP15.8■□□□□ 0.12
LSM6-201ENST00000296581 DNAAF3Q8N9W5 541 aa15.8■□□□□ 0.12
LSM6-201ENST00000296581 CENPTQ96BT3 561 aa15.8■□□□□ 0.12
LSM6-201ENST00000296581 MRRFQ96E11 262 aaKnown RBP15.8■□□□□ 0.12
LSM6-201ENST00000296581 TBL1YQ9BQ87 522 aa15.8■□□□□ 0.12
LSM6-201ENST00000296581 NT5MQ9NPB1 228 aa15.8■□□□□ 0.12
LSM6-201ENST00000296581 MAN1C1Q9NR34 630 aa15.8■□□□□ 0.12
LSM6-201ENST00000296581 SMYD2Q9NRG4 433 aa15.8■□□□□ 0.12
LSM6-201ENST00000296581 DOCK6Q96HP0 2047 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.79■□□□□ 0.12
LSM6-201ENST00000296581 TSPAN3O60637 253 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 FGF19O95750 216 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 CKMP06732 381 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 CA3P07451 260 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 ZNF177Q13360 481 aaPredicted RBP15.79■□□□□ 0.12
LSM6-201ENST00000296581 MPP3Q13368 585 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 LBRQ14739 615 aaKnown RBP15.79■□□□□ 0.12
LSM6-201ENST00000296581 PDE12Q6L8Q7 609 aaKnown RBP15.79■□□□□ 0.12
LSM6-201ENST00000296581 KDELC1Q6UW63 502 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 HTR3DQ70Z44 454 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 SLC26A11Q86WA9 606 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 LRRC6Q86X45 466 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 OR7D4Q8NG98 312 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 MDM1Q8TC05 714 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 TTC17Q96AE7 1141 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 APOL2Q9BQE5 337 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 ZNF180Q9UJW8 692 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 LSM7Q9UK45 103 aaKnown RBP15.79■□□□□ 0.12
LSM6-201ENST00000296581 CXorf49A8MYA2 514 aaPredicted RBP15.79■□□□□ 0.12
LSM6-201ENST00000296581 RHOCP08134 193 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 BRAFP15056 766 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 CHN1P15882 459 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 KRT15P19012 456 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms