RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 ETS2P15036 469 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 NPTX2P47972 431 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 POLD2P49005 469 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 RPL14P50914 215 aaKnown RBP10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 CDC42P60953 191 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 XIAPP98170 497 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 CXCL9Q07325 125 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 CGRRF1Q99675 332 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 TOR4AQ9NXH8 423 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 FAM47E-STBD1D6RA91 191 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 MYL6P60660 151 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 C1QBPQ07021 282 aaKnown RBP10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 MSLNQ13421 630 aaPredicted RBP10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 GIT2Q14161 759 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 GPR107Q5VW38 600 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 LLGL2Q6P1M3 1020 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 SPESP1Q6UW49 350 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 C6orf89Q6UWU4 347 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 SV2AQ7L0J3 742 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 AMIGO3Q86WK7 504 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 MCOLN2Q8IZK6 566 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 ABRAQ8N0Z2 381 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 SAMD3Q8N6K7 520 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 LPCAT1Q8NF37 534 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 CKAP2Q8WWK9 683 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 PRMT6Q96LA8 375 aaPredicted RBP10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 KLHL32Q96NJ5 620 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 TAAR1Q96RJ0 339 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 APBA2Q99767 749 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 PRKD2Q9BZL6 878 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 SLC12A8A0AV02 714 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 AGRPO00253 132 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 OR6A2O95222 327 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 TFRCP02786 760 aaKnown RBP10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 S100A6P06703 90 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 CKMP06732 381 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 TCF7P36402 384 aaPredicted RBP10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 RAP1GAPP47736 663 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 TROAPQ12815 778 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 TSC22D1Q15714 1073 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 RNF19BQ6ZMZ0 732 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 ARHGAP36Q6ZRI8 547 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 NET1Q7Z628 596 aaPredicted RBP10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 DHDDSQ86SQ9 333 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 TCAIMQ8N3R3 496 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 SMYD1Q8NB12 490 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 PIWIL2Q8TC59 973 aaKnown RBP10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 NAT14Q8WUY8 206 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 POMKQ9H5K3 350 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 XIRP1Q702N8 1843 aaKnown RBP10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 CYB561D2O14569 222 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 TEX28O15482 410 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 GAS2O43903 313 aaKnown RBP10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 SH3BGRLO75368 114 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 EIF4BP23588 611 aaKnown RBP10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 GSTM5P46439 218 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 PYDC2Q56P42 97 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 MFSD7Q6UXD7 560 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 HTR3CQ8WXA8 447 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 NUDT12Q9BQG2 462 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 STN1Q9H668 368 aaKnown RBP10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 RSL24D1Q9UHA3 163 aaKnown RBP10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 C3orf18Q9UK00 162 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 KCNH4Q9UQ05 1017 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 GMPPBQ9Y5P6 360 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 RRN3P2A6NIE6 340 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 KCNK1O00180 336 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 HMGB3O15347 200 aaKnown RBP10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 FBXO21O94952 628 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 MBL2P11226 248 aaPredicted RBP10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 TNNI3P19429 210 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 CYP2A7P20853 494 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 RPA3P35244 121 aaPredicted RBP10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 ACSM2AQ08AH3 577 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 SPANXN3Q5MJ09 141 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 ACSM2BQ68CK6 577 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 SAMD7Q7Z3H4 446 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 DAGLBQ8NCG7 672 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 ZNF540Q8NDQ6 660 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 TMEM176AQ96HP8 235 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 DMTF1Q9Y222 760 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 ANKRD6Q9Y2G4 727 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 FAM237BA0A1B0GVD1 139 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 TTLL13PA6NNM8 815 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 C5P01031 1676 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 ERVK-10P10266 1014 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 ERCC2P18074 760 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 CASP5P51878 434 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 FAM187BQ17R55 369 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 C5orf22Q49AR2 442 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 DACT2Q5SW24 774 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 ANGEL2Q5VTE6 544 aaKnown RBP10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 UBE2Q1Q7Z7E8 422 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 ARMC8Q8IUR7 673 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 TMEM139Q8IV31 216 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 ULK2Q8IYT8 1036 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 ETNPPLQ8TBG4 499 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 BBS4Q96RK4 519 aa10.87□□□□□ -0.67
PKNOX1-201ENST00000291547 CCDC3Q9BQI4 270 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms