RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 CEP44Q9C0F1 390 aa11.71□□□□□ -0.53
VPS33A-201ENST00000267199 ABCB10Q9NRK6 738 aa11.71□□□□□ -0.53
VPS33A-201ENST00000267199 PCDHA11Q9Y5I1 949 aa11.71□□□□□ -0.53
VPS33A-201ENST00000267199 FAM149AA5PLN7 773 aa11.71□□□□□ -0.54
VPS33A-201ENST00000267199 TAF4O00268 1085 aa11.71□□□□□ -0.54
VPS33A-201ENST00000267199 B4GALT4O60513 344 aa11.71□□□□□ -0.54
VPS33A-201ENST00000267199 CBFA2T3O75081 653 aa11.71□□□□□ -0.54
VPS33A-201ENST00000267199 TSC22D2O75157 780 aa11.71□□□□□ -0.54
VPS33A-201ENST00000267199 ZBTB11O95625 1053 aaPredicted RBP11.71□□□□□ -0.54
VPS33A-201ENST00000267199 MAGP20916 626 aa11.71□□□□□ -0.54
VPS33A-201ENST00000267199 NOS2P35228 1153 aa11.71□□□□□ -0.54
VPS33A-201ENST00000267199 ARL2P36404 184 aa11.71□□□□□ -0.54
VPS33A-201ENST00000267199 LHX1P48742 406 aa11.71□□□□□ -0.54
VPS33A-201ENST00000267199 NR6A1Q15406 480 aa11.71□□□□□ -0.54
VPS33A-201ENST00000267199 MAPRE1Q15691 268 aaKnown RBP11.71□□□□□ -0.54
VPS33A-201ENST00000267199 C11orf74Q86VG3 221 aa11.71□□□□□ -0.54
VPS33A-201ENST00000267199 DCP1BQ8IZD4 617 aaKnown RBP11.71□□□□□ -0.54
VPS33A-201ENST00000267199 BPIFB6Q8NFQ5 453 aa11.71□□□□□ -0.54
VPS33A-201ENST00000267199 WNT8BQ93098 351 aa11.71□□□□□ -0.54
VPS33A-201ENST00000267199 ZBED2Q9BTP6 218 aa11.71□□□□□ -0.54
VPS33A-201ENST00000267199 TBCDQ9BTW9 1192 aa11.71□□□□□ -0.54
VPS33A-201ENST00000267199 ARMC7Q9H6L4 198 aa11.71□□□□□ -0.54
VPS33A-201ENST00000267199 ZNF556Q9HAH1 456 aa11.71□□□□□ -0.54
VPS33A-201ENST00000267199 MYH7P12883 1935 aa11.71□□□□□ -0.54
VPS33A-201ENST00000267199 MYH11P35749 1972 aa11.71□□□□□ -0.54
VPS33A-201ENST00000267199 USP17L7P0C7H9 530 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 XIAPP98170 497 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 DLG1Q12959 904 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 DDX39BQ13838 428 aaKnown RBP11.7□□□□□ -0.54
VPS33A-201ENST00000267199 FRG1Q14331 258 aaKnown RBP11.7□□□□□ -0.54
VPS33A-201ENST00000267199 PLEKHH3Q7Z736 793 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 UNC93AQ86WB7 457 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 DSELQ8IZU8 1212 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 BORCS6Q96GS4 357 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 ABHD8Q96I13 439 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 OSBPL11Q9BXB4 747 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 ELOVL4Q9GZR5 314 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 FAM95CA0A1B0GW59 222 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 PMM2O15305 246 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 TCF4P15884 667 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 POU1F1P28069 291 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 FAM98BQ52LJ0 330 aaKnown RBP11.7□□□□□ -0.54
VPS33A-201ENST00000267199 TJAP1Q5JTD0 557 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 UBAP2Q5T6F2 1119 aaKnown RBP11.7□□□□□ -0.54
VPS33A-201ENST00000267199 PTRHD1Q6GMV3 140 aaKnown RBP11.7□□□□□ -0.54
VPS33A-201ENST00000267199 GK5Q6ZS86 529 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 PLPPR4Q7Z2D5 763 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 PLD5Q8N7P1 536 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 C1orf127Q8N9H9 656 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 C1orf50Q9BV19 199 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 POPDC2Q9HBU9 364 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 SPAG4Q9NPE6 437 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 SYBUQ9NX95 663 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 XPR1Q9UBH6 696 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 SNCAIPQ9Y6H5 919 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 TMEM63AO94886 807 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 VNN1O95497 513 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 MT-ND1P03886 318 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 NPY2RP49146 381 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 SFSWAPQ12872 951 aaKnown RBP11.7□□□□□ -0.54
VPS33A-201ENST00000267199 TFAP2DQ7Z6R9 452 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 TDRPQ86YL5 185 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 ZDHHC13Q8IUH4 622 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 PSTKQ8IV42 348 aaKnown RBP11.7□□□□□ -0.54
VPS33A-201ENST00000267199 FBXO30Q8TB52 745 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 HSFY1Q96LI6 401 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 TRHDEQ9UKU6 1024 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 TMEM247A6NEH6 219 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 MYO1DO94832 1006 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 LTFP02788 710 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 SNRPB2P08579 225 aaKnown RBP11.7□□□□□ -0.54
VPS33A-201ENST00000267199 CCNA2P20248 432 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 GAD2Q05329 585 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 GRIK3Q13003 919 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 MFSD4BQ5TF39 518 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 EGFLAMQ63HQ2 1017 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 TXNRD3NBQ6F5E7 133 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 TIGD7Q6NT04 549 aaPredicted RBP11.7□□□□□ -0.54
VPS33A-201ENST00000267199 ZNF410Q86VK4 478 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 FAM126BQ8IXS8 530 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 FNDC5Q8NAU1 212 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 ANKRD52Q8NB46 1076 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 MTERF3Q96E29 417 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 CCDC28BQ9BUN5 200 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 TRIM54Q9BYV2 358 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 TKTL2Q9H0I9 626 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 CDH19Q9H159 772 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 PTTG2Q9NZH5 202 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 NUDT5Q9UKK9 219 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 PRPF19Q9UMS4 504 aaKnown RBP11.7□□□□□ -0.54
VPS33A-201ENST00000267199 CRYL1Q9Y2S2 319 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 RAP2CQ9Y3L5 183 aa11.7□□□□□ -0.54
VPS33A-201ENST00000267199 PAPSS1O43252 624 aaPredicted RBP11.69□□□□□ -0.54
VPS33A-201ENST00000267199 UGT1A9O60656 530 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 JAK1P23458 1154 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 THPOP40225 353 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 RECQLP46063 649 aaPredicted RBP11.69□□□□□ -0.54
VPS33A-201ENST00000267199 TRMT10BQ6PF06 316 aaKnown RBP11.69□□□□□ -0.54
VPS33A-201ENST00000267199 ADCY4Q8NFM4 1077 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 MAGED4Q96JG8 741 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms