RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 TTC17Q96AE7 1141 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 ZNF669Q96BR6 464 aaPredicted RBP11.76□□□□□ -0.53
SCAF11-201ENST00000266589 CORO1BQ9BR76 489 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 FSD1LQ9BXM9 530 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 SLC25A51Q9H1U9 297 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 MAGEH1Q9H213 219 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 ATXN3LQ9H3M9 355 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 NKIRAS1Q9NYS0 192 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 ZNF180Q9UJW8 692 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 STOML2Q9UJZ1 356 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.75□□□□□ -0.53
SCAF11-201ENST00000266589 A0A1W2PRU2 124 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 FAM47DPA6NHR8 397 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 SRRM3A6NNA2 597 aaPredicted RBP11.75□□□□□ -0.53
SCAF11-201ENST00000266589 UGT1A9O60656 530 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 LPXNO60711 386 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 ARHGEF15O94989 841 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 LATS1O95835 1130 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 CKMP06732 381 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 MYL4P12829 197 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 GJA1P17302 382 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 KRT4P19013 534 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 TNK2Q07912 1038 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 ZNF177Q13360 481 aaPredicted RBP11.75□□□□□ -0.53
SCAF11-201ENST00000266589 MPP3Q13368 585 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 LBRQ14739 615 aaKnown RBP11.75□□□□□ -0.53
SCAF11-201ENST00000266589 TMCO4Q5TGY1 634 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 TTC39BQ5VTQ0 682 aaPredicted RBP11.75□□□□□ -0.53
SCAF11-201ENST00000266589 IL31Q6EBC2 164 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 CHST9Q7L1S5 443 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 IMP4Q96G21 291 aaKnown RBP11.75□□□□□ -0.53
SCAF11-201ENST00000266589 MRGPRX2Q96LB1 330 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 GCNAQ96QF7 691 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 IL22Q9GZX6 179 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 UGT1A7Q9HAW7 530 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 UGT1A10Q9HAW8 530 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 UGT1A8Q9HAW9 530 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 PDFQ9HBH1 243 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 MLXIPLQ9NP71 852 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 ASAH2Q9NR71 780 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 GBF1Q92538 1859 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 NRG2O14511 850 aaPredicted RBP11.75□□□□□ -0.53
SCAF11-201ENST00000266589 PRPF4O43172 522 aaKnown RBP eCLIP11.75□□□□□ -0.53
SCAF11-201ENST00000266589 GREM1O60565 184 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 USP1O94782 785 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 MT-ND3P03897 115 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 RHOCP08134 193 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 HOXD9P28356 352 aaPredicted RBP11.75□□□□□ -0.53
SCAF11-201ENST00000266589 CDC25CP30307 473 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 GBP2P32456 591 aaPredicted RBP11.75□□□□□ -0.53
SCAF11-201ENST00000266589 ADRA1AP35348 466 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 CD86P42081 329 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 DSC2Q02487 901 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 UBE3AQ05086 875 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 NIPAL4Q0D2K0 466 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 SMAD1Q15797 465 aaKnown RBP11.75□□□□□ -0.53
SCAF11-201ENST00000266589 PCSK7Q16549 785 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 STXBP5Q5T5C0 1151 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 TMEM135Q86UB9 458 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 PGBD5Q8N414 524 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 DYDC1Q8WWB3 177 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 CDKL2Q92772 493 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 FCRL3Q96P31 734 aaPredicted RBP11.75□□□□□ -0.53
SCAF11-201ENST00000266589 HTATIP2Q9BUP3 242 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 IL1RAPL1Q9NZN1 696 aa11.75□□□□□ -0.53
SCAF11-201ENST00000266589 HELZP42694 1942 aaKnown RBP11.75□□□□□ -0.53
SCAF11-201ENST00000266589 TRAV19A0A0A6YYK7 116 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 FAM237BA0A1B0GVD1 139 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 ILVBLA1L0T0 632 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 MAGEB16A2A368 324 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 GMNCA6NCL1 334 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 C5orf67F2Z3F1 127 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 GOLGA8RI6L899 631 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 GRM6O15303 877 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 KRT37O76014 449 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 IRS1P35568 1242 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 OXCT1P55809 520 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 WNT3AP56704 352 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 ZNF235Q14590 738 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 ANKRD20A4Q4UJ75 823 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 LGSNQ5TDP6 509 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 DENND5AQ6IQ26 1287 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 KDELC1Q6UW63 502 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 Q6ZNB5 142 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 MARK2Q7KZI7 788 aaKnown RBP11.74□□□□□ -0.53
SCAF11-201ENST00000266589 KDELC2Q7Z4H8 507 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 SETD3Q86TU7 594 aaPredicted RBP11.74□□□□□ -0.53
SCAF11-201ENST00000266589 TAX1BP1Q86VP1 789 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 RASSF3Q86WH2 238 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.74□□□□□ -0.53
SCAF11-201ENST00000266589 MFSD3Q96ES6 412 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 CERS2Q96G23 380 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 SERAC1Q96JX3 654 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 ZNF599Q96NL3 588 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 KLF6Q99612 283 aaPredicted RBP11.74□□□□□ -0.53
SCAF11-201ENST00000266589 SPON2Q9BUD6 331 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 FAM107BQ9H098 131 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 SSU72Q9NP77 194 aaKnown RBP11.74□□□□□ -0.53
SCAF11-201ENST00000266589 MAN1C1Q9NR34 630 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 CHRAC1Q9NRG0 131 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms