RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 PRSS16Q9NQE7 514 aa18.7■□□□□ 0.58
SDF4-201ENST00000263741 DONSONQ9NYP3 566 aa18.7■□□□□ 0.58
SDF4-201ENST00000263741 DTLQ9NZJ0 730 aa18.7■□□□□ 0.58
SDF4-201ENST00000263741 IPO11Q9UI26 975 aaKnown RBP18.7■□□□□ 0.58
SDF4-201ENST00000263741 MYO15AQ9UKN7 3530 aa18.7■□□□□ 0.58
SDF4-201ENST00000263741 MIF4GDA9UHW6 222 aaKnown RBP18.69■□□□□ 0.58
SDF4-201ENST00000263741 ENC1O14682 589 aa18.69■□□□□ 0.58
SDF4-201ENST00000263741 NPC1O15118 1278 aa18.69■□□□□ 0.58
SDF4-201ENST00000263741 GALR2O43603 387 aaPredicted RBP18.69■□□□□ 0.58
SDF4-201ENST00000263741 SYNCRIPO60506 623 aaKnown RBP18.69■□□□□ 0.58
SDF4-201ENST00000263741 NNMTP40261 264 aa18.69■□□□□ 0.58
SDF4-201ENST00000263741 GABPB1Q06547 395 aaPredicted RBP18.69■□□□□ 0.58
SDF4-201ENST00000263741 STARD3Q14849 445 aa18.69■□□□□ 0.58
SDF4-201ENST00000263741 ZNF569Q5MCW4 686 aa18.69■□□□□ 0.58
SDF4-201ENST00000263741 ATPAF2Q8N5M1 289 aa18.69■□□□□ 0.58
SDF4-201ENST00000263741 LZTR1Q8N653 840 aa18.69■□□□□ 0.58
SDF4-201ENST00000263741 EXOC2Q96KP1 924 aa18.69■□□□□ 0.58
SDF4-201ENST00000263741 MKRN2Q9H000 416 aaKnown RBP18.69■□□□□ 0.58
SDF4-201ENST00000263741 CD93Q9NPY3 652 aa18.69■□□□□ 0.58
SDF4-201ENST00000263741 SPAG17Q6Q759 2223 aa18.69■□□□□ 0.58
SDF4-201ENST00000263741 ZNF487B1APH4 448 aa18.69■□□□□ 0.58
SDF4-201ENST00000263741 ATP9BO43861 1147 aa18.69■□□□□ 0.58
SDF4-201ENST00000263741 PRAMEF11O60813 436 aa18.69■□□□□ 0.58
SDF4-201ENST00000263741 TMCC1O94876 653 aa18.69■□□□□ 0.58
SDF4-201ENST00000263741 TDGF1P13385 188 aa18.69■□□□□ 0.58
SDF4-201ENST00000263741 GABRG2P18507 467 aa18.69■□□□□ 0.58
SDF4-201ENST00000263741 DGKEP52429 567 aa18.69■□□□□ 0.58
SDF4-201ENST00000263741 VSIG1Q86XK7 387 aa18.69■□□□□ 0.58
SDF4-201ENST00000263741 KRT222Q8N1A0 295 aa18.69■□□□□ 0.58
SDF4-201ENST00000263741 SLC35F6Q8N357 371 aa18.69■□□□□ 0.58
SDF4-201ENST00000263741 OR6K2Q8NGY2 324 aa18.69■□□□□ 0.58
SDF4-201ENST00000263741 PTPRN2Q92932 1015 aa18.69■□□□□ 0.58
SDF4-201ENST00000263741 BCCIPQ9P287 314 aaKnown RBP eCLIP18.69■□□□□ 0.58
SDF4-201ENST00000263741 CEP192Q8TEP8 1941 aa18.68■□□□□ 0.58
SDF4-201ENST00000263741 NDUFV2P19404 249 aa18.68■□□□□ 0.58
SDF4-201ENST00000263741 C9orf64Q5T6V5 341 aa18.68■□□□□ 0.58
SDF4-201ENST00000263741 STK40Q8N2I9 435 aa18.68■□□□□ 0.58
SDF4-201ENST00000263741 MNS1Q8NEH6 495 aa18.68■□□□□ 0.58
SDF4-201ENST00000263741 PRSS33Q8NF86 280 aa18.68■□□□□ 0.58
SDF4-201ENST00000263741 FAM118BQ9BPY3 351 aa18.68■□□□□ 0.58
SDF4-201ENST00000263741 OSBPL8Q9BZF1 889 aa18.68■□□□□ 0.58
SDF4-201ENST00000263741 UBA2Q9UBT2 640 aaPredicted RBP18.68■□□□□ 0.58
SDF4-201ENST00000263741 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.68■□□□□ 0.585e-12■□□□□ 10
SDF4-201ENST00000263741 V9GYY5 206 aaPredicted RBP18.68■□□□□ 0.58
SDF4-201ENST00000263741 SDK1Q7Z5N4 2213 aa18.68■□□□□ 0.58
SDF4-201ENST00000263741 EDDM13A0A1B0GTR0 161 aa18.67■□□□□ 0.58
SDF4-201ENST00000263741 H0Y858 1186 aa18.67■□□□□ 0.58
SDF4-201ENST00000263741 ZNF821O75541 412 aaPredicted RBP18.67■□□□□ 0.58
SDF4-201ENST00000263741 APBB3O95704 486 aa18.67■□□□□ 0.58
SDF4-201ENST00000263741 FNTBP49356 437 aa18.67■□□□□ 0.58
SDF4-201ENST00000263741 COPAP53621 1224 aa18.67■□□□□ 0.58
SDF4-201ENST00000263741 GALNT2Q10471 571 aa18.67■□□□□ 0.58
SDF4-201ENST00000263741 CAMK2GQ13555 558 aaPredicted RBP18.67■□□□□ 0.58
SDF4-201ENST00000263741 RPS6KA1Q15418 735 aa18.67■□□□□ 0.58
SDF4-201ENST00000263741 PPP2R5EQ16537 467 aa18.67■□□□□ 0.58
SDF4-201ENST00000263741 ATXN7L2Q5T6C5 722 aaPredicted RBP18.67■□□□□ 0.58
SDF4-201ENST00000263741 PGBD3Q8N328 593 aa18.67■□□□□ 0.58
SDF4-201ENST00000263741 TLR10Q9BXR5 811 aa18.67■□□□□ 0.58
SDF4-201ENST00000263741 POLMQ9NP87 494 aaPredicted RBP18.67■□□□□ 0.58
SDF4-201ENST00000263741 ARGLU1Q9NWB6 273 aaPredicted RBP18.67■□□□□ 0.58
SDF4-201ENST00000263741 PLXND1Q9Y4D7 1925 aa18.67■□□□□ 0.58
SDF4-201ENST00000263741 MAFKO60675 156 aa18.67■□□□□ 0.58
SDF4-201ENST00000263741 GARSP41250 739 aaKnown RBP18.67■□□□□ 0.58
SDF4-201ENST00000263741 FBXO38Q6PIJ6 1188 aa18.67■□□□□ 0.58
SDF4-201ENST00000263741 KIAA1324Q6UXG2 1013 aaKnown RBP18.67■□□□□ 0.58
SDF4-201ENST00000263741 MAMSTRQ6ZN01 415 aa18.67■□□□□ 0.58
SDF4-201ENST00000263741 KDM1BQ8NB78 822 aa18.67■□□□□ 0.58
SDF4-201ENST00000263741 CHST14Q8NCH0 376 aa18.67■□□□□ 0.58
SDF4-201ENST00000263741 ZNF419Q96HQ0 510 aaPredicted RBP18.67■□□□□ 0.58
SDF4-201ENST00000263741 MRGPRX1Q96LB2 322 aa18.67■□□□□ 0.58
SDF4-201ENST00000263741 LGMNQ99538 433 aa18.67■□□□□ 0.58
SDF4-201ENST00000263741 RAPGEFL1Q9UHV5 662 aa18.67■□□□□ 0.58
SDF4-201ENST00000263741 ABCA7Q8IZY2 2146 aa18.67■□□□□ 0.58
SDF4-201ENST00000263741 DMDP11532 3685 aa18.67■□□□□ 0.58
SDF4-201ENST00000263741 RNF103O00237 685 aa18.66■□□□□ 0.58
SDF4-201ENST00000263741 KCNK3O14649 394 aa18.66■□□□□ 0.58
SDF4-201ENST00000263741 GJB3O75712 270 aa18.66■□□□□ 0.58
SDF4-201ENST00000263741 PAPSS2O95340 614 aaPredicted RBP18.66■□□□□ 0.58
SDF4-201ENST00000263741 CXCR5P32302 372 aa18.66■□□□□ 0.58
SDF4-201ENST00000263741 TFDP2Q14188 446 aa18.66■□□□□ 0.58
SDF4-201ENST00000263741 POM121L1PQ3SYA9 428 aa18.66■□□□□ 0.58
SDF4-201ENST00000263741 INVSQ9Y283 1065 aa18.66■□□□□ 0.58
SDF4-201ENST00000263741 TCRBV7S2A1N4TA0A589 114 aa18.65■□□□□ 0.58
SDF4-201ENST00000263741 ZSCAN5CA6NGD5 496 aaPredicted RBP18.65■□□□□ 0.58
SDF4-201ENST00000263741 KIF5CO60282 957 aa18.65■□□□□ 0.58
SDF4-201ENST00000263741 SP9P0CG40 484 aa18.65■□□□□ 0.58
SDF4-201ENST00000263741 GKP32189 559 aa18.65■□□□□ 0.58
SDF4-201ENST00000263741 METAP1P53582 386 aa18.65■□□□□ 0.58
SDF4-201ENST00000263741 IL10RBQ08334 325 aa18.65■□□□□ 0.58
SDF4-201ENST00000263741 SLC10A7Q0GE19 358 aa18.65■□□□□ 0.58
SDF4-201ENST00000263741 SRSF5Q13243 272 aaKnown RBP18.65■□□□□ 0.58
SDF4-201ENST00000263741 CYTH1Q15438 398 aa18.65■□□□□ 0.58
SDF4-201ENST00000263741 CCNYQ8ND76 341 aa18.65■□□□□ 0.58
SDF4-201ENST00000263741 OR2A12Q8NGT7 310 aa18.65■□□□□ 0.58
SDF4-201ENST00000263741 OR2T3Q8NH03 318 aa18.65■□□□□ 0.58
SDF4-201ENST00000263741 GRIN3AQ8TCU5 1115 aa18.65■□□□□ 0.58
SDF4-201ENST00000263741 SUN2Q9UH99 717 aa18.65■□□□□ 0.58
SDF4-201ENST00000263741 PEX11BO96011 259 aa18.65■□□□□ 0.58
SDF4-201ENST00000263741 RGRP47804 291 aa18.65■□□□□ 0.58
SDF4-201ENST00000263741 PSMD8P48556 350 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms