RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 FATE1Q969F0 183 aa16.94■□□□□ 0.3
CHCHD3-201ENST00000262570 CEP44Q9C0F1 390 aa16.94■□□□□ 0.3
CHCHD3-201ENST00000262570 C2orf42Q9NWW7 574 aa16.94■□□□□ 0.3
CHCHD3-201ENST00000262570 SUN2Q9UH99 717 aa16.94■□□□□ 0.3
CHCHD3-201ENST00000262570 SLC8A2Q9UPR5 921 aa16.94■□□□□ 0.3
CHCHD3-201ENST00000262570 FCF1Q9Y324 198 aaKnown RBP16.94■□□□□ 0.3
CHCHD3-201ENST00000262570 MUC22E2RYF6 1773 aaPredicted RBP16.93■□□□□ 0.3
CHCHD3-201ENST00000262570 NYNRINQ9P2P1 1898 aaKnown RBP16.93■□□□□ 0.3
CHCHD3-201ENST00000262570 A0A1W2PQF6 199 aa16.93■□□□□ 0.3
CHCHD3-201ENST00000262570 MATN3O15232 486 aa16.93■□□□□ 0.3
CHCHD3-201ENST00000262570 TMCC1O94876 653 aa16.93■□□□□ 0.3
CHCHD3-201ENST00000262570 HOXB2P14652 356 aa16.93■□□□□ 0.3
CHCHD3-201ENST00000262570 DEKP35659 375 aaKnown RBP16.93■□□□□ 0.3
CHCHD3-201ENST00000262570 XRCC4Q13426 336 aa16.93■□□□□ 0.3
CHCHD3-201ENST00000262570 HNRNPDQ14103 355 aaKnown RBP16.93■□□□□ 0.3
CHCHD3-201ENST00000262570 RFTN1Q14699 578 aaPredicted RBP16.93■□□□□ 0.3
CHCHD3-201ENST00000262570 CYTH1Q15438 398 aa16.93■□□□□ 0.3
CHCHD3-201ENST00000262570 CRY1Q16526 586 aa16.93■□□□□ 0.3
CHCHD3-201ENST00000262570 TMEM92Q6UXU6 159 aa16.93■□□□□ 0.3
CHCHD3-201ENST00000262570 ZC3H18Q86VM9 953 aaKnown RBP16.93■□□□□ 0.3
CHCHD3-201ENST00000262570 MAML1Q92585 1016 aa16.93■□□□□ 0.3
CHCHD3-201ENST00000262570 PTPRN2Q92932 1015 aa16.93■□□□□ 0.3
CHCHD3-201ENST00000262570 ISG20Q96AZ6 181 aaKnown RBP16.93■□□□□ 0.3
CHCHD3-201ENST00000262570 MTG2Q9H4K7 406 aa16.93■□□□□ 0.3
CHCHD3-201ENST00000262570 CD248Q9HCU0 757 aa16.93■□□□□ 0.3
CHCHD3-201ENST00000262570 POLR3BQ9NW08 1133 aaPredicted RBP16.93■□□□□ 0.3
CHCHD3-201ENST00000262570 R3HDM2Q9Y2K5 976 aaKnown RBP16.93■□□□□ 0.3
CHCHD3-201ENST00000262570 SAR1BQ9Y6B6 198 aa16.93■□□□□ 0.3
CHCHD3-201ENST00000262570 EDDM13A0A1B0GTR0 161 aa16.92■□□□□ 0.3
CHCHD3-201ENST00000262570 TARSL2A2RTX5 802 aaKnown RBP16.92■□□□□ 0.3
CHCHD3-201ENST00000262570 PRR33A8MZF0 331 aa16.92■□□□□ 0.3
CHCHD3-201ENST00000262570 HACD1B0YJ81 288 aa16.92■□□□□ 0.3
CHCHD3-201ENST00000262570 TUBB4AP04350 444 aa16.92■□□□□ 0.3
CHCHD3-201ENST00000262570 VAV1P15498 845 aa16.92■□□□□ 0.3
CHCHD3-201ENST00000262570 CASQ1P31415 396 aa16.92■□□□□ 0.3
CHCHD3-201ENST00000262570 SLC10A7Q0GE19 358 aa16.92■□□□□ 0.3
CHCHD3-201ENST00000262570 AP1B1Q10567 949 aa16.92■□□□□ 0.3
CHCHD3-201ENST00000262570 PRKD1Q15139 912 aaPredicted RBP16.92■□□□□ 0.3
CHCHD3-201ENST00000262570 SIX1Q15475 284 aaPredicted RBP16.92■□□□□ 0.3
CHCHD3-201ENST00000262570 LONRF2Q1L5Z9 754 aa16.92■□□□□ 0.3
CHCHD3-201ENST00000262570 TMCO4Q5TGY1 634 aa16.92■□□□□ 0.3
CHCHD3-201ENST00000262570 C22orf39Q6P5X5 142 aa16.92■□□□□ 0.3
CHCHD3-201ENST00000262570 ADAT2Q7Z6V5 191 aaKnown RBP16.92■□□□□ 0.3
CHCHD3-201ENST00000262570 CCDC13Q8IYE1 715 aa16.92■□□□□ 0.3
CHCHD3-201ENST00000262570 ACTRT1Q8TDG2 376 aa16.92■□□□□ 0.3
CHCHD3-201ENST00000262570 TFB1MQ8WVM0 346 aaKnown RBP16.92■□□□□ 0.3
CHCHD3-201ENST00000262570 MS4A14Q96JA4 679 aa16.92■□□□□ 0.3
CHCHD3-201ENST00000262570 FAM118BQ9BPY3 351 aa16.92■□□□□ 0.3
CHCHD3-201ENST00000262570 ZNF185O15231 689 aa16.91■□□□□ 0.3
CHCHD3-201ENST00000262570 SYNCRIPO60506 623 aaKnown RBP16.91■□□□□ 0.3
CHCHD3-201ENST00000262570 AVPR2P30518 371 aa16.91■□□□□ 0.3
CHCHD3-201ENST00000262570 CAMK2GQ13555 558 aaPredicted RBP16.91■□□□□ 0.3
CHCHD3-201ENST00000262570 LBRQ14739 615 aaKnown RBP16.91■□□□□ 0.3
CHCHD3-201ENST00000262570 C9orf64Q5T6V5 341 aa16.91■□□□□ 0.3
CHCHD3-201ENST00000262570 MARC1Q5VT66 337 aa16.91■□□□□ 0.3
CHCHD3-201ENST00000262570 KIAA1211LQ6NV74 962 aa16.91■□□□□ 0.3
CHCHD3-201ENST00000262570 Q6ZVU0 165 aa16.91■□□□□ 0.3
CHCHD3-201ENST00000262570 B4GALNT4Q76KP1 1039 aa16.91■□□□□ 0.3
CHCHD3-201ENST00000262570 TEX26Q8N6G2 289 aa16.91■□□□□ 0.3
CHCHD3-201ENST00000262570 PCDH20Q8N6Y1 951 aaKnown RBP16.91■□□□□ 0.3
CHCHD3-201ENST00000262570 NSMCE1Q8WV22 266 aa16.91■□□□□ 0.3
CHCHD3-201ENST00000262570 MAIP1Q8WWC4 291 aa16.91■□□□□ 0.3
CHCHD3-201ENST00000262570 C1QTNF1Q9BXJ1 281 aa16.91■□□□□ 0.3
CHCHD3-201ENST00000262570 PRSS16Q9NQE7 514 aa16.91■□□□□ 0.3
CHCHD3-201ENST00000262570 KCNK1O00180 336 aa16.9■□□□□ 0.3
CHCHD3-201ENST00000262570 MCF2LO15068 1137 aa16.9■□□□□ 0.3
CHCHD3-201ENST00000262570 SIN3BO75182 1162 aa16.9■□□□□ 0.3
CHCHD3-201ENST00000262570 RBP3P10745 1247 aa16.9■□□□□ 0.3
CHCHD3-201ENST00000262570 CCNB1P14635 433 aa16.9■□□□□ 0.3
CHCHD3-201ENST00000262570 COL9A1P20849 921 aa16.9■□□□□ 0.3
CHCHD3-201ENST00000262570 RENBPP51606 427 aa16.9■□□□□ 0.3
CHCHD3-201ENST00000262570 EIF3EP60228 445 aaKnown RBP16.9■□□□□ 0.3
CHCHD3-201ENST00000262570 STARD3Q14849 445 aa16.9■□□□□ 0.3
CHCHD3-201ENST00000262570 SLC45A4Q5BKX6 768 aa16.9■□□□□ 0.3
CHCHD3-201ENST00000262570 PLPP6Q8IY26 295 aa16.9■□□□□ 0.3
CHCHD3-201ENST00000262570 TSEN2Q8NCE0 465 aaKnown RBP16.9■□□□□ 0.3
CHCHD3-201ENST00000262570 OR2A12Q8NGT7 310 aa16.9■□□□□ 0.3
CHCHD3-201ENST00000262570 SLC35B2Q8TB61 432 aa16.9■□□□□ 0.3
CHCHD3-201ENST00000262570 ZNF419Q96HQ0 510 aaPredicted RBP16.9■□□□□ 0.3
CHCHD3-201ENST00000262570 QKIQ96PU8 341 aaKnown RBP eCLIP16.9■□□□□ 0.31e-7■■■■■ 32.3
CHCHD3-201ENST00000262570 PSKH2Q96QS6 385 aa16.9■□□□□ 0.3
CHCHD3-201ENST00000262570 TNKS2Q9H2K2 1166 aa16.9■□□□□ 0.3
CHCHD3-201ENST00000262570 SEPT3Q9UH03 358 aa16.9■□□□□ 0.3
CHCHD3-201ENST00000262570 H7C0C1 242 aa16.89■□□□□ 0.3
CHCHD3-201ENST00000262570 KIF2AO00139 706 aaPredicted RBP16.89■□□□□ 0.3
CHCHD3-201ENST00000262570 PGRMC1O00264 195 aaKnown RBP16.89■□□□□ 0.3
CHCHD3-201ENST00000262570 PAPSS2O95340 614 aaPredicted RBP16.89■□□□□ 0.3
CHCHD3-201ENST00000262570 MMP13P45452 471 aa16.89■□□□□ 0.3
CHCHD3-201ENST00000262570 ATP5OP48047 213 aa16.89■□□□□ 0.3
CHCHD3-201ENST00000262570 CXCL12P48061 93 aa16.89■□□□□ 0.3
CHCHD3-201ENST00000262570 CCR3P51677 355 aa16.89■□□□□ 0.3
CHCHD3-201ENST00000262570 DGKEP52429 567 aa16.89■□□□□ 0.3
CHCHD3-201ENST00000262570 RHOAP61586 193 aa16.89■□□□□ 0.3
CHCHD3-201ENST00000262570 IFI35P80217 286 aaPredicted RBP16.89■□□□□ 0.3
CHCHD3-201ENST00000262570 SATB1Q01826 763 aa16.89■□□□□ 0.3
CHCHD3-201ENST00000262570 TMEM31Q5JXX7 168 aa16.89■□□□□ 0.3
CHCHD3-201ENST00000262570 CREG2Q8IUH2 290 aa16.89■□□□□ 0.3
CHCHD3-201ENST00000262570 ATG4AQ8WYN0 398 aa16.89■□□□□ 0.3
CHCHD3-201ENST00000262570 NAP1L3Q99457 506 aaPredicted RBP16.89■□□□□ 0.3
CHCHD3-201ENST00000262570 IL12RB2Q99665 862 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms