RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 DNAJC28Q9NX36 388 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 TAB2Q9NYJ8 693 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 ARHGAP20Q9P2F6 1191 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 OR51B4Q9Y5P0 310 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 KNL1Q8NG31 2342 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 AKAP13Q12802 2813 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 DRGXA6NNA5 263 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 A6NNZ2 444 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 H3BM21 787 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 SMAD6O43541 496 aaKnown RBP12.5□□□□□ -0.41
TRAF4-202ENST00000262396 LEFTY1O75610 366 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 DKK1O94907 266 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 MMEP08473 750 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 XPAP23025 273 aaPredicted RBP12.5□□□□□ -0.41
TRAF4-202ENST00000262396 FLT3P36888 993 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 GABRB2P47870 512 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 ACADVLP49748 655 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 DUSP3P51452 185 aaPredicted RBP12.5□□□□□ -0.41
TRAF4-202ENST00000262396 RPS21P63220 83 aaKnown RBP12.5□□□□□ -0.41
TRAF4-202ENST00000262396 GNA12Q03113 381 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 KCNMA1Q12791 1236 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 ACAP1Q15027 740 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 C5orf22Q49AR2 442 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 CARD16Q5EG05 197 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 TCP11X2Q5H9J9 407 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 PIP5KL1Q5T9C9 394 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 KDM7AQ6ZMT4 941 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 DPY19L3Q6ZPD9 716 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 ZNF677Q86XU0 584 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 DCP2Q8IU60 420 aaKnown RBP12.5□□□□□ -0.41
TRAF4-202ENST00000262396 PCDH20Q8N6Y1 951 aaKnown RBP12.5□□□□□ -0.41
TRAF4-202ENST00000262396 PAF1Q8N7H5 531 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 FAM174AQ8TBP5 190 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 ARRDC3Q96B67 414 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 PSMB7Q99436 277 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 SELENOOQ9BVL4 669 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 CEP44Q9C0F1 390 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 VPS16Q9H269 839 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 SCUBE2Q9NQ36 999 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 TMPRSS4Q9NRS4 437 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 SAMSN1Q9NSI8 373 aaKnown RBP12.5□□□□□ -0.41
TRAF4-202ENST00000262396 KLHL11Q9NVR0 708 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 DKK4Q9UBT3 224 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 CLCA2Q9UQC9 943 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 ASPMQ8IZT6 3477 aa12.5□□□□□ -0.41
TRAF4-202ENST00000262396 CABIN1Q9Y6J0 2220 aa12.49□□□□□ -0.41
TRAF4-202ENST00000262396 F8VZ95 297 aa12.49□□□□□ -0.41
TRAF4-202ENST00000262396 SIGLEC6O43699 453 aa12.49□□□□□ -0.41
TRAF4-202ENST00000262396 CTSLP07711 333 aa12.49□□□□□ -0.41
TRAF4-202ENST00000262396 CDK11BP21127 795 aaKnown RBP12.49□□□□□ -0.41
TRAF4-202ENST00000262396 CDH5P33151 784 aaPredicted RBP12.49□□□□□ -0.41
TRAF4-202ENST00000262396 STAT1P42224 750 aa12.49□□□□□ -0.41
TRAF4-202ENST00000262396 NSFP46459 744 aaKnown RBP12.49□□□□□ -0.41
TRAF4-202ENST00000262396 SERPINH1P50454 418 aaKnown RBP12.49□□□□□ -0.41
TRAF4-202ENST00000262396 CLDN2P57739 230 aa12.49□□□□□ -0.41
TRAF4-202ENST00000262396 POLR2FP61218 127 aaKnown RBP12.49□□□□□ -0.41
TRAF4-202ENST00000262396 HNRNPKP61978 463 aaKnown RBP eCLIP12.49□□□□□ -0.411e-6■■■■□ 24.3
TRAF4-202ENST00000262396 RAD51Q06609 339 aa12.49□□□□□ -0.41
TRAF4-202ENST00000262396 ZNF211Q13398 564 aaPredicted RBP12.49□□□□□ -0.41
TRAF4-202ENST00000262396 CT47A1Q5JQC4 288 aaPredicted RBP12.49□□□□□ -0.41
TRAF4-202ENST00000262396 MIIPQ5JXC2 388 aa12.49□□□□□ -0.41
TRAF4-202ENST00000262396 KIAA1161Q6NSJ0 714 aa12.49□□□□□ -0.41
TRAF4-202ENST00000262396 Q6ZSR6 202 aa12.49□□□□□ -0.41
TRAF4-202ENST00000262396 NOP9Q86U38 636 aaKnown RBP12.49□□□□□ -0.41
TRAF4-202ENST00000262396 EMC1Q8N766 993 aa12.49□□□□□ -0.41
TRAF4-202ENST00000262396 OR13H1Q8NG92 308 aa12.49□□□□□ -0.41
TRAF4-202ENST00000262396 C11orf70Q9BRQ4 267 aa12.49□□□□□ -0.41
TRAF4-202ENST00000262396 HDAC8Q9BY41 377 aa12.49□□□□□ -0.41
TRAF4-202ENST00000262396 SLC17A9Q9BYT1 436 aa12.49□□□□□ -0.41
TRAF4-202ENST00000262396 TM6SF2Q9BZW4 377 aa12.49□□□□□ -0.41
TRAF4-202ENST00000262396 NLRC4Q9NPP4 1024 aa12.49□□□□□ -0.41
TRAF4-202ENST00000262396 FAM207AQ9NSI2 230 aaPredicted RBP12.49□□□□□ -0.41
TRAF4-202ENST00000262396 OR12D3Q9UGF7 316 aa12.49□□□□□ -0.41
TRAF4-202ENST00000262396 DNAI1Q9UI46 699 aa12.49□□□□□ -0.41
TRAF4-202ENST00000262396 FCF1Q9Y324 198 aaKnown RBP12.49□□□□□ -0.41
TRAF4-202ENST00000262396 PLXNA2O75051 1894 aa12.48□□□□□ -0.41
TRAF4-202ENST00000262396 TMEM131Q92545 1883 aa12.48□□□□□ -0.41
TRAF4-202ENST00000262396 KRIT1O00522 736 aa12.48□□□□□ -0.41
TRAF4-202ENST00000262396 FPGTO14772 594 aa12.48□□□□□ -0.41
TRAF4-202ENST00000262396 RAMP2O60895 175 aa12.48□□□□□ -0.41
TRAF4-202ENST00000262396 PAK4O96013 591 aaPredicted RBP12.48□□□□□ -0.41
TRAF4-202ENST00000262396 CAPNS1P04632 268 aa12.48□□□□□ -0.41
TRAF4-202ENST00000262396 ADRB3P13945 408 aa12.48□□□□□ -0.41
TRAF4-202ENST00000262396 HOXB3P14651 431 aaPredicted RBP12.48□□□□□ -0.41
TRAF4-202ENST00000262396 DGKAP23743 735 aa12.48□□□□□ -0.41
TRAF4-202ENST00000262396 L1CAMP32004 1257 aa12.48□□□□□ -0.41
TRAF4-202ENST00000262396 ACTN2P35609 894 aa12.48□□□□□ -0.41
TRAF4-202ENST00000262396 CCNHP51946 323 aaPredicted RBP12.48□□□□□ -0.41
TRAF4-202ENST00000262396 TAS2R38P59533 333 aa12.48□□□□□ -0.41
TRAF4-202ENST00000262396 SNRPD1P62314 119 aaKnown RBP12.48□□□□□ -0.41
TRAF4-202ENST00000262396 NOMO3P69849 1222 aa12.48□□□□□ -0.41
TRAF4-202ENST00000262396 CDR2Q01850 454 aa12.48□□□□□ -0.41
TRAF4-202ENST00000262396 ZNF284Q2VY69 593 aa12.48□□□□□ -0.41
TRAF4-202ENST00000262396 ZNF542PQ5EBM4 170 aa12.48□□□□□ -0.41
TRAF4-202ENST00000262396 OTUD1Q5VV17 481 aaPredicted RBP12.48□□□□□ -0.41
TRAF4-202ENST00000262396 SEL1L3Q68CR1 1132 aa12.48□□□□□ -0.41
TRAF4-202ENST00000262396 SCYL2Q6P3W7 929 aa12.48□□□□□ -0.41
TRAF4-202ENST00000262396 SASS6Q6UVJ0 657 aa12.48□□□□□ -0.41
TRAF4-202ENST00000262396 TRIM72Q6ZMU5 477 aa12.48□□□□□ -0.41
TRAF4-202ENST00000262396 RXFP2Q8WXD0 754 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms