RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 PWP1Q13610 501 aa19.21■□□□□ 0.66
PTPRE-201ENST00000254667 AADACL2Q6P093 401 aa19.21■□□□□ 0.66
PTPRE-201ENST00000254667 OXCT2Q9BYC2 517 aaPredicted RBP19.21■□□□□ 0.66
PTPRE-201ENST00000254667 IGFLR1Q9H665 355 aa19.21■□□□□ 0.66
PTPRE-201ENST00000254667 TBL1XO60907 577 aa19.2■□□□□ 0.66
PTPRE-201ENST00000254667 CALCAP01258 141 aa19.2■□□□□ 0.66
PTPRE-201ENST00000254667 ASGR1P07306 291 aa19.2■□□□□ 0.66
PTPRE-201ENST00000254667 ZBTB48P10074 688 aaPredicted RBP19.2■□□□□ 0.66
PTPRE-201ENST00000254667 ERCC2P18074 760 aa19.2■□□□□ 0.66
PTPRE-201ENST00000254667 LBPP18428 481 aa19.2■□□□□ 0.66
PTPRE-201ENST00000254667 USP6NLQ92738 828 aa19.2■□□□□ 0.66
PTPRE-201ENST00000254667 BBS4Q96RK4 519 aa19.2■□□□□ 0.66
PTPRE-201ENST00000254667 BAZ2BQ9UIF8 2168 aaKnown RBP19.2■□□□□ 0.66
PTPRE-201ENST00000254667 CLUHO75153 1309 aa19.2■□□□□ 0.66
PTPRE-201ENST00000254667 UBXN8O00124 270 aa19.2■□□□□ 0.66
PTPRE-201ENST00000254667 FGF19O95750 216 aa19.2■□□□□ 0.66
PTPRE-201ENST00000254667 HNRNPCP07910 306 aaKnown RBP eCLIP19.2■□□□□ 0.66
PTPRE-201ENST00000254667 IL27RAQ6UWB1 636 aa19.2■□□□□ 0.66
PTPRE-201ENST00000254667 UNC5AQ6ZN44 842 aa19.2■□□□□ 0.66
PTPRE-201ENST00000254667 SPPL2AQ8TCT8 520 aa19.2■□□□□ 0.66
PTPRE-201ENST00000254667 CORO1BQ9BR76 489 aa19.2■□□□□ 0.66
PTPRE-201ENST00000254667 ZMYM5Q9UJ78 669 aa19.2■□□□□ 0.66
PTPRE-201ENST00000254667 SRRM3A6NNA2 597 aaPredicted RBP19.2■□□□□ 0.66
PTPRE-201ENST00000254667 LDLRP01130 860 aa19.2■□□□□ 0.66
PTPRE-201ENST00000254667 GOT1P17174 413 aa19.2■□□□□ 0.66
PTPRE-201ENST00000254667 CCL23P55773 120 aa19.2■□□□□ 0.66
PTPRE-201ENST00000254667 C1DQ13901 141 aaKnown RBP19.2■□□□□ 0.66
PTPRE-201ENST00000254667 PPP1R26Q5T8A7 1209 aaPredicted RBP19.2■□□□□ 0.66
PTPRE-201ENST00000254667 ZNF655Q8N720 491 aaPredicted RBP19.2■□□□□ 0.66
PTPRE-201ENST00000254667 SLC39A8Q9C0K1 460 aa19.2■□□□□ 0.66
PTPRE-201ENST00000254667 FAM50BQ9Y247 325 aa19.2■□□□□ 0.66
PTPRE-201ENST00000254667 YDJCA8MPS7 323 aa19.2■□□□□ 0.66
PTPRE-201ENST00000254667 MLYCDO95822 493 aa19.2■□□□□ 0.66
PTPRE-201ENST00000254667 THOP1P52888 689 aa19.2■□□□□ 0.66
PTPRE-201ENST00000254667 SLC25A52Q3SY17 297 aa19.2■□□□□ 0.66
PTPRE-201ENST00000254667 SYT12Q8IV01 421 aa19.2■□□□□ 0.66
PTPRE-201ENST00000254667 CKAP2Q8WWK9 683 aa19.2■□□□□ 0.66
PTPRE-201ENST00000254667 EBNA1BP2Q99848 306 aaKnown RBP19.2■□□□□ 0.66
PTPRE-201ENST00000254667 SEMA3CQ99985 751 aa19.2■□□□□ 0.66
PTPRE-201ENST00000254667 RNPEPQ9H4A4 650 aa19.2■□□□□ 0.66
PTPRE-201ENST00000254667 SNX6Q9UNH7 406 aa19.2■□□□□ 0.66
PTPRE-201ENST00000254667 GNA13Q14344 377 aa19.19■□□□□ 0.66
PTPRE-201ENST00000254667 DOK6Q6PKX4 331 aa19.19■□□□□ 0.66
PTPRE-201ENST00000254667 IZUMO2Q6UXV1 221 aa19.19■□□□□ 0.66
PTPRE-201ENST00000254667 TSEN2Q8NCE0 465 aaKnown RBP19.19■□□□□ 0.66
PTPRE-201ENST00000254667 OMDQ99983 421 aa19.19■□□□□ 0.66
PTPRE-201ENST00000254667 PPP1R11O60927 126 aaPredicted RBP19.19■□□□□ 0.66
PTPRE-201ENST00000254667 CCNE2O96020 404 aa19.19■□□□□ 0.66
PTPRE-201ENST00000254667 FLT3LGP49771 235 aa19.19■□□□□ 0.66
PTPRE-201ENST00000254667 HK2P52789 917 aa19.19■□□□□ 0.66
PTPRE-201ENST00000254667 ARCQ7LC44 396 aa19.19■□□□□ 0.66
PTPRE-201ENST00000254667 SNX32Q86XE0 403 aa19.19■□□□□ 0.66
PTPRE-201ENST00000254667 WDR48Q8TAF3 677 aa19.19■□□□□ 0.66
PTPRE-201ENST00000254667 RDH11Q8TC12 318 aa19.19■□□□□ 0.66
PTPRE-201ENST00000254667 BBS2Q9BXC9 721 aa19.19■□□□□ 0.66
PTPRE-201ENST00000254667 RCOR3Q9P2K3 495 aaPredicted RBP19.19■□□□□ 0.66
PTPRE-201ENST00000254667 GLTPD2A6NH11 291 aa19.19■□□□□ 0.66
PTPRE-201ENST00000254667 PDE2AO00408 941 aaPredicted RBP19.19■□□□□ 0.66
PTPRE-201ENST00000254667 MAGEC1O60732 1142 aa19.19■□□□□ 0.66
PTPRE-201ENST00000254667 PARNO95453 639 aaKnown RBP19.19■□□□□ 0.66
PTPRE-201ENST00000254667 GNRH1P01148 92 aa19.19■□□□□ 0.66
PTPRE-201ENST00000254667 CDC25CP30307 473 aa19.19■□□□□ 0.66
PTPRE-201ENST00000254667 ATP13A4Q4VNC1 1196 aa19.19■□□□□ 0.66
PTPRE-201ENST00000254667 GJC2Q5T442 439 aaPredicted RBP19.19■□□□□ 0.66
PTPRE-201ENST00000254667 LCLAT1Q6UWP7 414 aa19.19■□□□□ 0.66
PTPRE-201ENST00000254667 PIWIL2Q8TC59 973 aaKnown RBP19.19■□□□□ 0.66
PTPRE-201ENST00000254667 PHACTR1Q9C0D0 580 aa19.19■□□□□ 0.66
PTPRE-201ENST00000254667 CAB39Q9Y376 341 aaPredicted RBP19.19■□□□□ 0.66
PTPRE-201ENST00000254667 RPL7AP62424 266 aaKnown RBP19.19■□□□□ 0.66
PTPRE-201ENST00000254667 VSTM1Q6UX27 236 aa19.19■□□□□ 0.66
PTPRE-201ENST00000254667 ALG9Q9H6U8 611 aa19.19■□□□□ 0.66
PTPRE-201ENST00000254667 ARHGAP28Q9P2N2 729 aa19.19■□□□□ 0.66
PTPRE-201ENST00000254667 EFR3BQ9Y2G0 817 aa19.19■□□□□ 0.66
PTPRE-201ENST00000254667 ZNF711Q9Y462 761 aa19.19■□□□□ 0.66
PTPRE-201ENST00000254667 SLURP2P0DP57 97 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 SERPINB1P30740 379 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 PURAQ00577 322 aaKnown RBP19.18■□□□□ 0.66
PTPRE-201ENST00000254667 IRF8Q02556 426 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 DGKZQ13574 1117 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 FAM187BQ17R55 369 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 HLA-DQA1Q5Y7H0 255 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 DUPD1Q68J44 220 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 POTEHQ6S545 545 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 ELMO1Q92556 727 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 NXF3Q9H4D5 531 aaKnown RBP19.18■□□□□ 0.66
PTPRE-201ENST00000254667 ATAD3AQ9NVI7 634 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 SGTAO43765 313 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 TLR5O60602 858 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 FGF1P05230 155 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 CLTBP09497 229 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 RPA3P35244 121 aaPredicted RBP19.18■□□□□ 0.66
PTPRE-201ENST00000254667 HSDL1Q3SXM5 330 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 ZCCHC23Q6ZST2 131 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 TTPALQ9BTX7 342 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 CEP44Q9C0F1 390 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 TMEM216Q9P0N5 145 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 ENTPD4Q9Y227 616 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 A0A1B0GW55 424 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 TMEM191CA6NGB0 347 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 ANKDD1BA6NHY2 528 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms