RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 FBXL6Q8N531 539 aa14.37□□□□□ -0.11
VPS25-201ENST00000253794 ALLCQ8N6M5 410 aa14.37□□□□□ -0.11
VPS25-201ENST00000253794 PCDH20Q8N6Y1 951 aaKnown RBP14.37□□□□□ -0.11
VPS25-201ENST00000253794 ATP11CQ8NB49 1132 aa14.37□□□□□ -0.11
VPS25-201ENST00000253794 TXNDC5Q8NBS9 432 aaKnown RBP14.37□□□□□ -0.11
VPS25-201ENST00000253794 RPLP0P6Q8NHW5 317 aa14.37□□□□□ -0.11
VPS25-201ENST00000253794 NKD2Q969F2 451 aaPredicted RBP14.37□□□□□ -0.11
VPS25-201ENST00000253794 RPL10LQ96L21 214 aaKnown RBP14.37□□□□□ -0.11
VPS25-201ENST00000253794 PSKH2Q96QS6 385 aa14.37□□□□□ -0.11
VPS25-201ENST00000253794 LGMNQ99538 433 aa14.37□□□□□ -0.11
VPS25-201ENST00000253794 IL12RB2Q99665 862 aa14.37□□□□□ -0.11
VPS25-201ENST00000253794 FBRSQ9HAH7 460 aa14.37□□□□□ -0.11
VPS25-201ENST00000253794 C11orf16Q9NQ32 467 aa14.37□□□□□ -0.11
VPS25-201ENST00000253794 CACNA2D2Q9NY47 1150 aa14.37□□□□□ -0.11
VPS25-201ENST00000253794 SUN2Q9UH99 717 aa14.37□□□□□ -0.11
VPS25-201ENST00000253794 EDDM13A0A1B0GTR0 161 aa14.36□□□□□ -0.11
VPS25-201ENST00000253794 A0A1W2PQF6 199 aa14.36□□□□□ -0.11
VPS25-201ENST00000253794 TTC34A8MYJ7 566 aa14.36□□□□□ -0.11
VPS25-201ENST00000253794 SGK1O00141 431 aa14.36□□□□□ -0.11
VPS25-201ENST00000253794 MCF2LO15068 1137 aa14.36□□□□□ -0.11
VPS25-201ENST00000253794 PI15O43692 258 aa14.36□□□□□ -0.11
VPS25-201ENST00000253794 GPR37L1O60883 481 aa14.36□□□□□ -0.11
VPS25-201ENST00000253794 TMCC1O94876 653 aa14.36□□□□□ -0.11
VPS25-201ENST00000253794 KLF8O95600 359 aaPredicted RBP14.36□□□□□ -0.11
VPS25-201ENST00000253794 GSRP00390 522 aa14.36□□□□□ -0.11
VPS25-201ENST00000253794 PRKCHP24723 683 aa14.36□□□□□ -0.11
VPS25-201ENST00000253794 HSPA9P38646 679 aaKnown RBP14.36□□□□□ -0.11
VPS25-201ENST00000253794 CSNK1DP48730 415 aa14.36□□□□□ -0.11
VPS25-201ENST00000253794 LBRQ14739 615 aaKnown RBP14.36□□□□□ -0.11
VPS25-201ENST00000253794 CYTH1Q15438 398 aa14.36□□□□□ -0.11
VPS25-201ENST00000253794 OASLQ15646 514 aaKnown RBP14.36□□□□□ -0.11
VPS25-201ENST00000253794 DLG2Q15700 870 aa14.36□□□□□ -0.11
VPS25-201ENST00000253794 CCNG2Q16589 344 aa14.36□□□□□ -0.11
VPS25-201ENST00000253794 FNDC3BQ53EP0 1204 aaKnown RBP14.36□□□□□ -0.11
VPS25-201ENST00000253794 SDE2Q6IQ49 451 aa14.36□□□□□ -0.11
VPS25-201ENST00000253794 C22orf39Q6P5X5 142 aa14.36□□□□□ -0.11
VPS25-201ENST00000253794 PKN3Q6P5Z2 889 aa14.36□□□□□ -0.11
VPS25-201ENST00000253794 ZNF354CQ86Y25 554 aa14.36□□□□□ -0.11
VPS25-201ENST00000253794 CDKL3Q8IVW4 592 aaPredicted RBP14.36□□□□□ -0.11
VPS25-201ENST00000253794 TFB1MQ8WVM0 346 aaKnown RBP14.36□□□□□ -0.11
VPS25-201ENST00000253794 PTPRN2Q92932 1015 aa14.36□□□□□ -0.11
VPS25-201ENST00000253794 PBXIP1Q96AQ6 731 aa14.36□□□□□ -0.11
VPS25-201ENST00000253794 HAUS1Q96CS2 278 aa14.36□□□□□ -0.11
VPS25-201ENST00000253794 ZNF419Q96HQ0 510 aaPredicted RBP14.36□□□□□ -0.11
VPS25-201ENST00000253794 HOMER3Q9NSC5 361 aa14.36□□□□□ -0.11
VPS25-201ENST00000253794 LHX3Q9UBR4 397 aa14.36□□□□□ -0.11
VPS25-201ENST00000253794 SEPT3Q9UH03 358 aa14.36□□□□□ -0.11
VPS25-201ENST00000253794 SLC8A2Q9UPR5 921 aa14.36□□□□□ -0.11
VPS25-201ENST00000253794 R3HDM2Q9Y2K5 976 aaKnown RBP14.36□□□□□ -0.11
VPS25-201ENST00000253794 CKAP5Q14008 2032 aa14.36□□□□□ -0.11
VPS25-201ENST00000253794 WASH3PC4AMC7 463 aa14.35□□□□□ -0.11
VPS25-201ENST00000253794 K7ERQ8 282 aa14.35□□□□□ -0.11
VPS25-201ENST00000253794 STK25O00506 426 aa14.35□□□□□ -0.11
VPS25-201ENST00000253794 ALOX15BO15296 676 aa14.35□□□□□ -0.11
VPS25-201ENST00000253794 LIASO43766 372 aa14.35□□□□□ -0.11
VPS25-201ENST00000253794 ZNF500O60304 480 aaPredicted RBP14.35□□□□□ -0.11
VPS25-201ENST00000253794 DCNP07585 359 aaKnown RBP14.35□□□□□ -0.11
VPS25-201ENST00000253794 RBP3P10745 1247 aa14.35□□□□□ -0.11
VPS25-201ENST00000253794 HOXB2P14652 356 aa14.35□□□□□ -0.11
VPS25-201ENST00000253794 VAV1P15498 845 aa14.35□□□□□ -0.11
VPS25-201ENST00000253794 RENBPP51606 427 aa14.35□□□□□ -0.11
VPS25-201ENST00000253794 EIF3EP60228 445 aaKnown RBP14.35□□□□□ -0.11
VPS25-201ENST00000253794 NSUN2Q08J23 767 aaKnown RBP eCLIP14.35□□□□□ -0.11
VPS25-201ENST00000253794 SLC10A7Q0GE19 358 aa14.35□□□□□ -0.11
VPS25-201ENST00000253794 CYP1B1Q16678 543 aa14.35□□□□□ -0.11
VPS25-201ENST00000253794 LONRF2Q1L5Z9 754 aa14.35□□□□□ -0.11
VPS25-201ENST00000253794 RALGPS1Q5JS13 557 aa14.35□□□□□ -0.11
VPS25-201ENST00000253794 CCDC33Q8N5R6 958 aa14.35□□□□□ -0.11
VPS25-201ENST00000253794 C12orf50Q8NA57 414 aaPredicted RBP14.35□□□□□ -0.11
VPS25-201ENST00000253794 CCNYQ8ND76 341 aa14.35□□□□□ -0.11
VPS25-201ENST00000253794 NSMCE1Q8WV22 266 aa14.35□□□□□ -0.11
VPS25-201ENST00000253794 VOPP1Q96AW1 172 aa14.35□□□□□ -0.11
VPS25-201ENST00000253794 RTP4Q96DX8 246 aa14.35□□□□□ -0.11
VPS25-201ENST00000253794 MS4A14Q96JA4 679 aa14.35□□□□□ -0.11
VPS25-201ENST00000253794 VAT1Q99536 393 aa14.35□□□□□ -0.11
VPS25-201ENST00000253794 FCF1Q9Y324 198 aaKnown RBP14.35□□□□□ -0.11
VPS25-201ENST00000253794 ACTL7AQ9Y615 435 aa14.35□□□□□ -0.11
VPS25-201ENST00000253794 ZDBF2Q9HCK1 2354 aa14.35□□□□□ -0.11
VPS25-201ENST00000253794 CFAP69A5D8W1 941 aa14.34□□□□□ -0.11
VPS25-201ENST00000253794 PRR33A8MZF0 331 aa14.34□□□□□ -0.11
VPS25-201ENST00000253794 ZNF185O15231 689 aa14.34□□□□□ -0.11
VPS25-201ENST00000253794 EPHX1P07099 455 aa14.34□□□□□ -0.11
VPS25-201ENST00000253794 HLA-EP13747 358 aa14.34□□□□□ -0.11
VPS25-201ENST00000253794 CCNB1P14635 433 aa14.34□□□□□ -0.11
VPS25-201ENST00000253794 CR2P20023 1033 aa14.34□□□□□ -0.11
VPS25-201ENST00000253794 MMP13P45452 471 aa14.34□□□□□ -0.11
VPS25-201ENST00000253794 NUMBP49757 651 aa14.34□□□□□ -0.11
VPS25-201ENST00000253794 DGKEP52429 567 aa14.34□□□□□ -0.11
VPS25-201ENST00000253794 WASHC5Q12768 1159 aa14.34□□□□□ -0.11
VPS25-201ENST00000253794 MTAPQ13126 283 aa14.34□□□□□ -0.11
VPS25-201ENST00000253794 ELAVL3Q14576 367 aaKnown RBP14.34□□□□□ -0.11
VPS25-201ENST00000253794 CRY1Q16526 586 aa14.34□□□□□ -0.11
VPS25-201ENST00000253794 C9orf64Q5T6V5 341 aa14.34□□□□□ -0.11
VPS25-201ENST00000253794 MARC1Q5VT66 337 aa14.34□□□□□ -0.11
VPS25-201ENST00000253794 ZC3H18Q86VM9 953 aaKnown RBP14.34□□□□□ -0.11
VPS25-201ENST00000253794 BBS5Q8N3I7 341 aa14.34□□□□□ -0.11
VPS25-201ENST00000253794 TMEM105Q8N8V8 129 aa14.34□□□□□ -0.11
VPS25-201ENST00000253794 PRELID2Q8N945 189 aa14.34□□□□□ -0.11
VPS25-201ENST00000253794 OR2AP1Q8NGE2 309 aa14.34□□□□□ -0.11
VPS25-201ENST00000253794 OR2A12Q8NGT7 310 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms