RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 HCFC1R1Q9NWW0 138 aa23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 SCAMP3O14828 347 aaKnown RBP23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 TM9SF1O15321 606 aa23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 CCL16O15467 120 aa23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 MT-CYBP00156 380 aaPredicted RBP23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 GLUD1P00367 558 aa23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 HLA-DQB2P05538 268 aa23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 ZXDBP98169 803 aa23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 RING1Q06587 406 aa23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 TXNDC8Q6A555 127 aa23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 RGS9BPQ6ZS82 235 aa23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 DNAAF3Q8N9W5 541 aa23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 FCRL5Q96RD9 977 aa23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 LRRC40Q9H9A6 602 aa23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 GLOD4Q9HC38 313 aa23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 TRPC7Q9HCX4 862 aa23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 SMPD4Q9NXE4 827 aa23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 BFARQ9NZS9 450 aa23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 SAMD15Q9P1V8 674 aa23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 IPO11Q9UI26 975 aaKnown RBP23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 RPS6KL1Q9Y6S9 549 aa23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 NOTCH4Q99466 2003 aa23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 LPXNO60711 386 aa23.76■■□□□ 1.39
SYNGR3-201ENST00000248121 IRF1P10914 325 aa23.76■■□□□ 1.39
SYNGR3-201ENST00000248121 ETV4P43268 484 aa23.76■■□□□ 1.39
SYNGR3-201ENST00000248121 SMAD1Q15797 465 aaKnown RBP23.76■■□□□ 1.39
SYNGR3-201ENST00000248121 STXBP5Q5T5C0 1151 aa23.76■■□□□ 1.39
SYNGR3-201ENST00000248121 HHATQ5VTY9 493 aa23.76■■□□□ 1.39
SYNGR3-201ENST00000248121 CDHR3Q6ZTQ4 885 aa23.76■■□□□ 1.39
SYNGR3-201ENST00000248121 TMEM135Q86UB9 458 aa23.76■■□□□ 1.39
SYNGR3-201ENST00000248121 RWDD3Q9Y3V2 267 aa23.76■■□□□ 1.39
SYNGR3-201ENST00000248121 PSAT1Q9Y617 370 aa23.76■■□□□ 1.39
SYNGR3-201ENST00000248121 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.75■■□□□ 1.39
SYNGR3-201ENST00000248121 DRGXA6NNA5 263 aa23.75■■□□□ 1.39
SYNGR3-201ENST00000248121 PER2O15055 1255 aa23.75■■□□□ 1.39
SYNGR3-201ENST00000248121 LRG1P02750 347 aa23.75■■□□□ 1.39
SYNGR3-201ENST00000248121 KLKB1P03952 638 aa23.75■■□□□ 1.39
SYNGR3-201ENST00000248121 POLBP06746 335 aa23.75■■□□□ 1.39
SYNGR3-201ENST00000248121 EPCAMP16422 314 aa23.75■■□□□ 1.39
SYNGR3-201ENST00000248121 SLC6A4P31645 630 aa23.75■■□□□ 1.39
SYNGR3-201ENST00000248121 TIGD7Q6NT04 549 aaPredicted RBP23.75■■□□□ 1.39
SYNGR3-201ENST00000248121 YTHDF3Q7Z739 585 aaKnown RBP23.75■■□□□ 1.39
SYNGR3-201ENST00000248121 LRRC49Q8IUZ0 686 aa23.75■■□□□ 1.39
SYNGR3-201ENST00000248121 HMCESQ96FZ2 354 aa23.75■■□□□ 1.39
SYNGR3-201ENST00000248121 ZFRQ96KR1 1074 aaKnown RBP23.75■■□□□ 1.39
SYNGR3-201ENST00000248121 MAFFQ9ULX9 164 aa23.75■■□□□ 1.39
SYNGR3-201ENST00000248121 ZCWPW2A0A1B0GU75 182 aa23.75■■□□□ 1.39
SYNGR3-201ENST00000248121 KRT38O76015 456 aa23.75■■□□□ 1.39
SYNGR3-201ENST00000248121 DHRS4L1P0CG22 281 aa23.75■■□□□ 1.39
SYNGR3-201ENST00000248121 TPH1P17752 444 aa23.75■■□□□ 1.39
SYNGR3-201ENST00000248121 GABRR2P28476 465 aa23.75■■□□□ 1.39
SYNGR3-201ENST00000248121 NDST2P52849 883 aa23.75■■□□□ 1.39
SYNGR3-201ENST00000248121 CORO7P57737 925 aa23.75■■□□□ 1.39
SYNGR3-201ENST00000248121 DNAJC3Q13217 504 aa23.75■■□□□ 1.39
SYNGR3-201ENST00000248121 PRPSAP1Q14558 356 aa23.75■■□□□ 1.39
SYNGR3-201ENST00000248121 SPANXN3Q5MJ09 141 aa23.75■■□□□ 1.39
SYNGR3-201ENST00000248121 LGSNQ5TDP6 509 aa23.75■■□□□ 1.39
SYNGR3-201ENST00000248121 MROH9Q5TGP6 573 aa23.75■■□□□ 1.39
SYNGR3-201ENST00000248121 RBM22Q9NW64 420 aaKnown RBP eCLIP23.75■■□□□ 1.39
SYNGR3-201ENST00000248121 STC2O76061 302 aa23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 ERVK-10P10266 1014 aa23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 CCNFP41002 786 aa23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 NUMBP49757 651 aa23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 NAPEPLDQ6IQ20 393 aa23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 RFWD3Q6PCD5 774 aa23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 FAM47EQ6ZV65 393 aa23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 ARL14EPQ8N8R7 260 aaPredicted RBP23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 PBX4Q9BYU1 374 aa23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 SLCO1B3Q9NPD5 702 aa23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 MAN1C1Q9NR34 630 aa23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 HBS1LQ9Y450 684 aaKnown RBP23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 PDE4DIPQ5VU43 2346 aa23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 J3KR12 359 aa23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 ATP9BO43861 1147 aa23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 CCR2P41597 374 aa23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 SERPINB9P50453 376 aa23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 ITIH4Q14624 930 aa23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 FAM133BQ5BKY9 247 aaKnown RBP23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 KLHDC10Q6PID8 442 aa23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 PACS1Q6VY07 963 aa23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 ADGRD2Q7Z7M1 963 aa23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 ITIH5Q86UX2 942 aa23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 CHSY1Q86X52 802 aa23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 ZNF669Q96BR6 464 aaPredicted RBP23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 MTBPQ96DY7 904 aa23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 MFSD3Q96ES6 412 aa23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 CERS2Q96G23 380 aa23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 CDK5RAP1Q96SZ6 601 aaKnown RBP23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 AAR2Q9Y312 384 aaKnown RBP23.74■■□□□ 1.39
SYNGR3-201ENST00000248121 USP1O94782 785 aa23.73■■□□□ 1.39
SYNGR3-201ENST00000248121 NPY2RP49146 381 aa23.73■■□□□ 1.39
SYNGR3-201ENST00000248121 UBE3AQ05086 875 aa23.73■■□□□ 1.39
SYNGR3-201ENST00000248121 MGAT5Q09328 741 aa23.73■■□□□ 1.39
SYNGR3-201ENST00000248121 ANKRD20A4Q4UJ75 823 aa23.73■■□□□ 1.39
SYNGR3-201ENST00000248121 CCDC149Q6ZUS6 474 aa23.73■■□□□ 1.39
SYNGR3-201ENST00000248121 RBM23Q86U06 439 aaKnown RBP23.73■■□□□ 1.39
SYNGR3-201ENST00000248121 DENND1CQ8IV53 801 aa23.73■■□□□ 1.39
SYNGR3-201ENST00000248121 KLF16Q9BXK1 252 aaPredicted RBP23.73■■□□□ 1.39
SYNGR3-201ENST00000248121 CHRAC1Q9NRG0 131 aa23.73■■□□□ 1.39
SYNGR3-201ENST00000248121 UXTQ9UBK9 157 aaPredicted RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms