RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 KLF6Q99612 283 aaPredicted RBP17.32■□□□□ 0.36
CDKN1A-201ENST00000244741 SSU72Q9NP77 194 aaKnown RBP17.32■□□□□ 0.36
CDKN1A-201ENST00000244741 VANGL2Q9ULK5 521 aa17.32■□□□□ 0.36
CDKN1A-201ENST00000244741 HEY1Q9Y5J3 304 aa17.32■□□□□ 0.36
CDKN1A-201ENST00000244741 GOLGA8RI6L899 631 aa17.31■□□□□ 0.36
CDKN1A-201ENST00000244741 LEFTY2O00292 366 aa17.31■□□□□ 0.36
CDKN1A-201ENST00000244741 EDF1O60869 148 aaKnown RBP17.31■□□□□ 0.36
CDKN1A-201ENST00000244741 AVILO75366 819 aa17.31■□□□□ 0.36
CDKN1A-201ENST00000244741 MAP3K6O95382 1288 aa17.31■□□□□ 0.36
CDKN1A-201ENST00000244741 POU2F2P09086 479 aa17.31■□□□□ 0.36
CDKN1A-201ENST00000244741 TSHRP16473 764 aa17.31■□□□□ 0.36
CDKN1A-201ENST00000244741 HOXB8P17481 243 aaPredicted RBP17.31■□□□□ 0.36
CDKN1A-201ENST00000244741 KCNA5P22460 613 aa17.31■□□□□ 0.36
CDKN1A-201ENST00000244741 VIPR2P41587 438 aa17.31■□□□□ 0.36
CDKN1A-201ENST00000244741 NUMBP49757 651 aa17.31■□□□□ 0.36
CDKN1A-201ENST00000244741 PDK2Q15119 407 aa17.31■□□□□ 0.36
CDKN1A-201ENST00000244741 MS4A13Q5J8X5 152 aa17.31■□□□□ 0.36
CDKN1A-201ENST00000244741 RWDD4Q6NW29 188 aaKnown RBP17.31■□□□□ 0.36
CDKN1A-201ENST00000244741 NPAS3Q8IXF0 933 aa17.31■□□□□ 0.36
CDKN1A-201ENST00000244741 AGGF1Q8N302 714 aaeCLIP17.31■□□□□ 0.36
CDKN1A-201ENST00000244741 SH3RF2Q8TEC5 729 aa17.31■□□□□ 0.36
CDKN1A-201ENST00000244741 LRRN4Q8WUT4 740 aa17.31■□□□□ 0.36
CDKN1A-201ENST00000244741 ZNF75CPQ92670 426 aaPredicted RBP17.31■□□□□ 0.36
CDKN1A-201ENST00000244741 BHMTQ93088 406 aa17.31■□□□□ 0.36
CDKN1A-201ENST00000244741 FAF2Q96CS3 445 aa17.31■□□□□ 0.36
CDKN1A-201ENST00000244741 C12orf65Q9H3J6 166 aaKnown RBP17.31■□□□□ 0.36
CDKN1A-201ENST00000244741 AGO1Q9UL18 857 aaKnown RBP17.31■□□□□ 0.36
CDKN1A-201ENST00000244741 TRIM33Q9UPN9 1127 aa17.31■□□□□ 0.36
CDKN1A-201ENST00000244741 TEX264Q9Y6I9 313 aa17.31■□□□□ 0.36
CDKN1A-201ENST00000244741 KCNN4O15554 427 aa17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 LRIG2O94898 1065 aa17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 ZWINTO95229 277 aa17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 ATP6V1G2O95670 118 aa17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 SLC2A3P11169 496 aa17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 AMPD1P23109 780 aa17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 SLC7A9P82251 487 aa17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 SCAPQ12770 1279 aa17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 CIR1Q86X95 450 aaPredicted RBP17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 KIF2BQ8N4N8 673 aa17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 ATP6V0D2Q8N8Y2 350 aa17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 MSLNLQ96KJ4 702 aa17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 BTN2A3PQ96KV6 586 aa17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 RAB6BQ9NRW1 208 aa17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 TDP1Q9NUW8 608 aa17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 ETNK2Q9NVF9 386 aa17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 MPP6Q9NZW5 540 aa17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 TCRBV9S1A1TA0A576 114 aa17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 EEF2KO00418 725 aaKnown RBP17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 APOL1O14791 398 aa17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 TSPAN3O60637 253 aa17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 ADRA1DP25100 572 aa17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 RBL1P28749 1068 aa17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 SLC6A4P31645 630 aa17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 KPNA1P52294 538 aaPredicted RBP17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 RING1Q06587 406 aa17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 CFAP52Q8N1V2 620 aa17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 BANPQ8N9N5 519 aa17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 KLHL29Q96CT2 875 aa17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 CSPG4P5Q96PW8 444 aa17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 CYTH2Q99418 400 aa17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 POMKQ9H5K3 350 aa17.3■□□□□ 0.36
CDKN1A-201ENST00000244741 CHADO15335 359 aa17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 GBP2P32456 591 aaPredicted RBP17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 CCDC15Q0P6D6 951 aa17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 FAM78AQ5JUQ0 283 aa17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 SLC9A4Q6AI14 798 aa17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 CHSY1Q86X52 802 aa17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 TCP10LQ8TDR4 215 aa17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 PLD4Q96BZ4 506 aa17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 RTP4Q96DX8 246 aa17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 LRRC3BQ96PB8 259 aa17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 HAPLN3Q96S86 360 aa17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 PAK5Q9P286 719 aa17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 SH3BP1Q9Y3L3 701 aa17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 WDR91A4D1P6 747 aa17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 GREM1O60565 184 aa17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 PAPLNO95428 1278 aa17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 TGM2P21980 687 aa17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 EPHB2P29323 1055 aa17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 ARL4AP40617 200 aa17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 MLLT6P55198 1093 aaPredicted RBP17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 TPI1P60174 286 aa17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 KBTBD12Q3ZCT8 623 aa17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 FAXCQ5TGI0 409 aa17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 ASRGL1Q7L266 308 aa17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 BBS7Q8IWZ6 715 aa17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 IGSF8Q969P0 613 aa17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 MYLK2Q9H1R3 596 aa17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 NOD2Q9HC29 1040 aa17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 ARHGEF3Q9NR81 526 aa17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 SLC17A7Q9P2U7 560 aa17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 BAIAP2L1Q9UHR4 511 aa17.29■□□□□ 0.36
CDKN1A-201ENST00000244741 E9PAM4 449 aa17.28■□□□□ 0.36
CDKN1A-201ENST00000244741 ACSL4O60488 711 aa17.28■□□□□ 0.36
CDKN1A-201ENST00000244741 DDX6P26196 483 aaKnown RBP eCLIP17.28■□□□□ 0.365e-6■■■■□ 22.9
CDKN1A-201ENST00000244741 SGSHP51688 502 aa17.28■□□□□ 0.36
CDKN1A-201ENST00000244741 SEMA3BQ13214 749 aa17.28■□□□□ 0.36
CDKN1A-201ENST00000244741 FBXL22Q6P050 247 aa17.28■□□□□ 0.36
CDKN1A-201ENST00000244741 RFX8Q6ZV50 586 aa17.28■□□□□ 0.36
CDKN1A-201ENST00000244741 OTOAQ7RTW8 1153 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms