RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 ERLEC1Q96DZ1 483 aa17.8■□□□□ 0.44
HOXC6-201ENST00000243108 LOXL4Q96JB6 756 aa17.8■□□□□ 0.44
HOXC6-201ENST00000243108 TMBIM4Q9HC24 238 aa17.8■□□□□ 0.44
HOXC6-201ENST00000243108 PCDH9Q9HC56 1237 aa17.8■□□□□ 0.44
HOXC6-201ENST00000243108 PCDH18Q9HCL0 1135 aa17.8■□□□□ 0.44
HOXC6-201ENST00000243108 RXFP3Q9NSD7 469 aa17.8■□□□□ 0.44
HOXC6-201ENST00000243108 ANAPC5Q9UJX4 755 aa17.8■□□□□ 0.44
HOXC6-201ENST00000243108 CEP192Q8TEP8 1941 aa17.8■□□□□ 0.44
HOXC6-201ENST00000243108 GON4LQ3T8J9 2241 aa17.79■□□□□ 0.44
HOXC6-201ENST00000243108 A0A1W2PQF6 199 aa17.79■□□□□ 0.44
HOXC6-201ENST00000243108 GFRA2O00451 464 aa17.79■□□□□ 0.44
HOXC6-201ENST00000243108 FBXO21O94952 628 aa17.79■□□□□ 0.44
HOXC6-201ENST00000243108 IL4RP24394 825 aa17.79■□□□□ 0.44
HOXC6-201ENST00000243108 MMRN1Q13201 1228 aa17.79■□□□□ 0.44
HOXC6-201ENST00000243108 SF3A2Q15428 464 aaKnown RBP17.79■□□□□ 0.44
HOXC6-201ENST00000243108 IZUMO3Q5VZ72 239 aa17.79■□□□□ 0.44
HOXC6-201ENST00000243108 HIBCHQ6NVY1 386 aaPredicted RBP17.79■□□□□ 0.44
HOXC6-201ENST00000243108 SCYL2Q6P3W7 929 aa17.79■□□□□ 0.44
HOXC6-201ENST00000243108 BNIPLQ7Z465 357 aa17.79■□□□□ 0.44
HOXC6-201ENST00000243108 GLIS1Q8NBF1 620 aa17.79■□□□□ 0.44
HOXC6-201ENST00000243108 OR2W6PQ8NHA6 318 aa17.79■□□□□ 0.44
HOXC6-201ENST00000243108 KCNV2Q8TDN2 545 aa17.79■□□□□ 0.44
HOXC6-201ENST00000243108 NT5C3BQ969T7 300 aa17.79■□□□□ 0.44
HOXC6-201ENST00000243108 PLD4Q96BZ4 506 aa17.79■□□□□ 0.44
HOXC6-201ENST00000243108 FAF2Q96CS3 445 aa17.79■□□□□ 0.44
HOXC6-201ENST00000243108 RNF157Q96PX1 679 aa17.79■□□□□ 0.44
HOXC6-201ENST00000243108 ABCC13Q9NSE7 274 aa17.79■□□□□ 0.44
HOXC6-201ENST00000243108 TCRBV21S2A2A0A5A6 115 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 WASH3PC4AMC7 463 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 CHKAP35790 457 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 VPS41P49754 854 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 ATXN1P54253 815 aaKnown RBP17.78■□□□□ 0.44
HOXC6-201ENST00000243108 KRT81Q14533 505 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 PUM1Q14671 1186 aaKnown RBP eCLIP17.78■□□□□ 0.44
HOXC6-201ENST00000243108 DPYSL2Q16555 572 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 GEN1Q17RS7 908 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 SLC25A52Q3SY17 297 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 ZC3H12AQ5D1E8 599 aaKnown RBP17.78■□□□□ 0.44
HOXC6-201ENST00000243108 PLA2G2CQ5R387 149 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 ERMARDQ5T6L9 678 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 KIAA1211LQ6NV74 962 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 MSANTD2Q6P1R3 559 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 TRMT10CQ7L0Y3 403 aaKnown RBP17.78■□□□□ 0.44
HOXC6-201ENST00000243108 CPXM2Q8N436 756 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 FAM76AQ8TAV0 307 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 HMGB4Q8WW32 186 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 SLC2A13Q96QE2 648 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 ZNF670Q9BS34 389 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 FOXP3Q9BZS1 431 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 OLA1Q9NTK5 396 aaKnown RBP17.78■□□□□ 0.44
HOXC6-201ENST00000243108 SAE1Q9UBE0 346 aaPredicted RBP17.78■□□□□ 0.44
HOXC6-201ENST00000243108 HBS1LQ9Y450 684 aaKnown RBP17.78■□□□□ 0.44
HOXC6-201ENST00000243108 NCOR2Q9Y618 2525 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 HMGB1P1B2RPK0 211 aaPredicted RBP17.78■□□□□ 0.44
HOXC6-201ENST00000243108 DNALI1O14645 258 aaPredicted RBP17.78■□□□□ 0.44
HOXC6-201ENST00000243108 MYZAPP0CAP1 466 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 PECAM1P16284 738 aaPredicted RBP17.78■□□□□ 0.44
HOXC6-201ENST00000243108 NTSR1P30989 418 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 NOS2P35228 1153 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 YWHAZP63104 245 aaKnown RBP17.78■□□□□ 0.44
HOXC6-201ENST00000243108 NOMO1Q15155 1222 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 CA9Q16790 459 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 PREPLQ4J6C6 727 aaPredicted RBP17.78■□□□□ 0.44
HOXC6-201ENST00000243108 USP39Q53GS9 565 aaKnown RBP17.78■□□□□ 0.44
HOXC6-201ENST00000243108 DENND2CQ68D51 928 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 PRUNE1Q86TP1 453 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 DEFB106AQ8N104 65 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 RNF139Q8WU17 664 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 IRGQQ8WZA9 623 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 ATP6V1G3Q96LB4 118 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 TMEM121Q9BTD3 319 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 MAK16Q9BXY0 300 aaKnown RBP17.78■□□□□ 0.44
HOXC6-201ENST00000243108 GPATCH2LQ9NWQ4 482 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 MBD1Q9UIS9 605 aaPredicted RBP17.78■□□□□ 0.44
HOXC6-201ENST00000243108 SLC27A6Q9Y2P4 619 aa17.78■□□□□ 0.44
HOXC6-201ENST00000243108 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.77■□□□□ 0.44
HOXC6-201ENST00000243108 GOLGA6L10A6NI86 522 aa17.77■□□□□ 0.44
HOXC6-201ENST00000243108 PRR5-ARHGAP8B1AHC4 643 aa17.77■□□□□ 0.44
HOXC6-201ENST00000243108 NDC80O14777 642 aa17.77■□□□□ 0.44
HOXC6-201ENST00000243108 RIPK2O43353 540 aa17.77■□□□□ 0.44
HOXC6-201ENST00000243108 LTFP02788 710 aa17.77■□□□□ 0.44
HOXC6-201ENST00000243108 HOXB2P14652 356 aa17.77■□□□□ 0.44
HOXC6-201ENST00000243108 GABRG2P18507 467 aa17.77■□□□□ 0.44
HOXC6-201ENST00000243108 P2RY2P41231 377 aa17.77■□□□□ 0.44
HOXC6-201ENST00000243108 SGSHP51688 502 aa17.77■□□□□ 0.44
HOXC6-201ENST00000243108 ARHGAP8P85298 464 aa17.77■□□□□ 0.44
HOXC6-201ENST00000243108 P3H1Q32P28 736 aa17.77■□□□□ 0.44
HOXC6-201ENST00000243108 MAP7D1Q3KQU3 841 aa17.77■□□□□ 0.44
HOXC6-201ENST00000243108 ANKRD20A8PQ5CZ79 823 aa17.77■□□□□ 0.44
HOXC6-201ENST00000243108 OTUD1Q5VV17 481 aaPredicted RBP17.77■□□□□ 0.44
HOXC6-201ENST00000243108 PMS2CLQ68D20 193 aa17.77■□□□□ 0.44
HOXC6-201ENST00000243108 SLC9A4Q6AI14 798 aa17.77■□□□□ 0.44
HOXC6-201ENST00000243108 ERMP1Q7Z2K6 904 aa17.77■□□□□ 0.44
HOXC6-201ENST00000243108 RELL1Q8IUW5 271 aa17.77■□□□□ 0.44
HOXC6-201ENST00000243108 NPY6RQ99463 290 aa17.77■□□□□ 0.44
HOXC6-201ENST00000243108 POLMQ9NP87 494 aaPredicted RBP17.77■□□□□ 0.44
HOXC6-201ENST00000243108 CACNA2D2Q9NY47 1150 aa17.77■□□□□ 0.44
HOXC6-201ENST00000243108 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.77■□□□□ 0.44
HOXC6-201ENST00000243108 STOML2Q9UJZ1 356 aa17.77■□□□□ 0.44
HOXC6-201ENST00000243108 RAD54BQ9Y620 910 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms