RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 ZNF222Q9UK12 451 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 IKZF3Q9UKT9 509 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 BPGMP07738 259 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 KCNT2Q6UVM3 1135 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 EGFL6Q8IUX8 553 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 TBC1D16Q8TBP0 767 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 C5orf60A6NFR6 353 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 FAUP35544 74 aaKnown RBP8.32□□□□□ -1.08
APOB-201ENST00000233242 CNPY1Q3B7I2 92 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 FAM71AQ8IYT1 594 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 OFCC1Q8IZS5 231 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 PIF1Q9H611 641 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 PRDM8Q9NQV8 689 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 FETUBQ9UGM5 382 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 ALKQ9UM73 1620 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 F5H5T6 163 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 CHCHD6Q9BRQ6 235 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 OVOS2A0A0J9YW53 1432 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 OVOS2Q6IE36 1432 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 SIGLEC16A6NMB1 481 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 CRHR1P34998 444 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 PBX1P40424 430 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 GPR15P49685 360 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 C10orf53Q8N6V4 93 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 CDH19Q9H159 772 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 EBF2Q9HAK2 575 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 NFKBIL1Q9UBC1 381 aaPredicted RBP8.32□□□□□ -1.08
APOB-201ENST00000233242 PARNO95453 639 aaKnown RBP8.32□□□□□ -1.08
APOB-201ENST00000233242 ZBTB11O95625 1053 aaPredicted RBP8.32□□□□□ -1.08
APOB-201ENST00000233242 THRBP10828 461 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 GPN1Q9HCN4 374 aaPredicted RBP8.32□□□□□ -1.08
APOB-201ENST00000233242 FBXO6Q9NRD1 293 aaPredicted RBP8.32□□□□□ -1.08
APOB-201ENST00000233242 PNMA8BQ9ULN7 279 aaPredicted RBP8.32□□□□□ -1.08
APOB-201ENST00000233242 DNM1LO00429 736 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 OGNP20774 298 aaKnown RBP8.32□□□□□ -1.08
APOB-201ENST00000233242 GRIA4P48058 902 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 MAPK10P53779 464 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 ELP6Q0PNE2 266 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 PCID2Q5JVF3 399 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 C11orf74Q86VG3 221 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 GMCL1P1Q8NEA9 526 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 EEF1AKMT1Q8WVE0 214 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 CXorf21Q9HAI6 301 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 DDX43Q9NXZ2 648 aaKnown RBP8.32□□□□□ -1.08
APOB-201ENST00000233242 SEC22BO75396 215 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 ERBB2P04626 1255 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 PTGS2P35354 604 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 CACNB2Q08289 660 aaPredicted RBP8.32□□□□□ -1.08
APOB-201ENST00000233242 ZNF484Q5JVG2 852 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 FCGR1BQ92637 280 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 TRMT13Q9NUP7 481 aaKnown RBP8.32□□□□□ -1.08
APOB-201ENST00000233242 GNPTGQ9UJJ9 305 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 SNX7Q9UNH6 387 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 CCNYL2Q5T2Q4 361 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 MILR1Q7Z6M3 343 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 EBNA1BP2Q99848 306 aaKnown RBP8.31□□□□□ -1.08
APOB-201ENST00000233242 ZNF7P17097 686 aaPredicted RBP8.31□□□□□ -1.08
APOB-201ENST00000233242 CENPAP49450 140 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 RNF19BQ6ZMZ0 732 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 ERI1Q8IV48 349 aaKnown RBP8.31□□□□□ -1.08
APOB-201ENST00000233242 SLC9A9Q8IVB4 645 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 TAMM41Q96BW9 452 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 ETNK2Q9NVF9 386 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 CAPN8A6NHC0 703 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 DDX3YO15523 660 aaKnown RBP8.31□□□□□ -1.08
APOB-201ENST00000233242 CYP2A7P20853 494 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 NAGLUP54802 743 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 IL27RAQ6UWB1 636 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 NIPA1Q7RTP0 329 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 HAVCR1Q96D42 359 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 ACE2Q9BYF1 805 aaPredicted RBP8.31□□□□□ -1.08
APOB-201ENST00000233242 ARL8BQ9NVJ2 186 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 ADGRB3O60242 1522 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 TULP3O75386 442 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 C6orf222P0C671 652 aaPredicted RBP8.31□□□□□ -1.08
APOB-201ENST00000233242 KDELR1P24390 212 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 DALRD3Q5D0E6 543 aaKnown RBP8.31□□□□□ -1.08
APOB-201ENST00000233242 ERAP2Q6P179 960 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 UBE2E3Q969T4 207 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 QRFPRQ96P65 431 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 SLCO1B3Q9NPD5 702 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 IFT80Q9P2H3 777 aaPredicted RBP8.31□□□□□ -1.08
APOB-201ENST00000233242 CABYRO75952 493 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 LHX1P48742 406 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 POU6F1Q14863 301 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 FGD3Q5JSP0 725 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 PAGE2Q7Z2X7 111 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 ECHDC2Q86YB7 292 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 PCDH20Q8N6Y1 951 aaKnown RBP8.31□□□□□ -1.08
APOB-201ENST00000233242 CENPNQ96H22 339 aaPredicted RBP8.31□□□□□ -1.08
APOB-201ENST00000233242 GMCL1Q96IK5 515 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 NMUR2Q9GZQ4 415 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 MED28Q9H204 178 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 PTSQ03393 145 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 CRAMP1Q96RY5 1269 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 MIPP30301 263 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 CYP2C18P33260 490 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 SLC26A2P50443 739 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 NFIAQ12857 509 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 MIIPQ5JXC2 388 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms