RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 APOBEC3HQ6NTF7 200 aaKnown RBP13.54□□□□□ -0.24
NEK4-201ENST00000233027 AMIGO2Q86SJ2 522 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 CDK20Q8IZL9 346 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 YME1L1Q96TA2 773 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 REEP1Q9H902 201 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 DIABLOQ9NR28 239 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 KLHL28Q9NXS3 571 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 ARL15Q9NXU5 204 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 EHD3Q9NZN3 535 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 RNF225M0QZC1 329 aaPredicted RBP13.54□□□□□ -0.24
NEK4-201ENST00000233027 FFAR3O14843 346 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 GPR42O15529 346 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 HPCAL1P37235 193 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 MACC1Q6ZN28 852 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 LZTR1Q8N653 840 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 MTIF3Q9H2K0 278 aaKnown RBP13.54□□□□□ -0.24
NEK4-201ENST00000233027 NFKBIL1Q9UBC1 381 aaPredicted RBP13.54□□□□□ -0.24
NEK4-201ENST00000233027 VWDEQ8N2E2 1590 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 hCG_1818297A0A087WSY0 165 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 PDHXO00330 501 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 TGFB3P10600 412 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 ADCYAP1R1P41586 468 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 PERM1Q5SV97 790 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 GOT1P17174 413 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 EPHA3P29320 983 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 FOLH1Q04609 750 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 WSCD1Q658N2 575 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 ZCCHC8Q6NZY4 707 aaKnown RBP13.54□□□□□ -0.24
NEK4-201ENST00000233027 MCOLN3Q8TDD5 553 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 UCMAQ8WVF2 138 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 RCN3Q96D15 328 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 RNF157Q96PX1 679 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 OLFM1Q99784 485 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 SLC4A5Q9BY07 1137 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 ABCG8Q9H221 673 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 ATAD3AQ9NVI7 634 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 AHSPQ9NZD4 102 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 MTF2Q9Y483 593 aaPredicted RBP13.54□□□□□ -0.24
NEK4-201ENST00000233027 SCAMP3O14828 347 aaKnown RBP13.53□□□□□ -0.24
NEK4-201ENST00000233027 RNASEH1O60930 286 aaKnown RBP13.53□□□□□ -0.24
NEK4-201ENST00000233027 ABHD2P08910 425 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 PAICSP22234 425 aaKnown RBP13.53□□□□□ -0.24
NEK4-201ENST00000233027 POLD2P49005 469 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 CYP4F2P78329 520 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 CYP4F3Q08477 520 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 DCTN2Q13561 401 aaKnown RBP13.53□□□□□ -0.24
NEK4-201ENST00000233027 ZNF438Q7Z4V0 828 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 CAMK1DQ8IU85 385 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 ULK2Q8IYT8 1036 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 BBS4Q96RK4 519 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 CCDC3Q9BQI4 270 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 C1orf50Q9BV19 199 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 IKZF4Q9H2S9 585 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 PNPOQ9NVS9 261 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 HES2Q9Y543 173 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 ACTL7BQ9Y614 415 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 EME2A4GXA9 379 aaPredicted RBP13.53□□□□□ -0.24
NEK4-201ENST00000233027 CENPXA8MT69 81 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 SNPHO15079 494 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 NUDT17P0C025 328 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 ADORA2AP29274 412 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 IDH2P48735 452 aaKnown RBP13.53□□□□□ -0.24
NEK4-201ENST00000233027 IL2P60568 153 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 AMPD2Q01433 879 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 BCL2L1Q07817 233 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 WNT8BQ93098 351 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 ASB2Q96Q27 587 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 CDK5RAP1Q96SZ6 601 aaKnown RBP13.53□□□□□ -0.24
NEK4-201ENST00000233027 P2RX7Q99572 595 aaKnown RBP13.53□□□□□ -0.24
NEK4-201ENST00000233027 POLR1EQ9GZS1 481 aaKnown RBP13.53□□□□□ -0.24
NEK4-201ENST00000233027 EPB41L1Q9H4G0 881 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 IPPQ9Y573 584 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 SMIM31A0A1B0GVY4 71 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 MEIS2O14770 477 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 NTRK1P04629 796 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 MAPK9P45984 424 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 NR1D2Q14995 579 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 ADHFE1Q8IWW8 467 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 FAM45AQ8TCE6 357 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 ZFP14Q9HCL3 533 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 SPAG4Q9NPE6 437 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 ADARB2Q9NS39 739 aaKnown RBP13.53□□□□□ -0.24
NEK4-201ENST00000233027 TMA7Q9Y2S6 64 aaKnown RBP13.53□□□□□ -0.24
NEK4-201ENST00000233027 CD3EAPO15446 510 aaKnown RBP13.53□□□□□ -0.24
NEK4-201ENST00000233027 ANXA6P08133 673 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 HNRNPLP14866 589 aaKnown RBP eCLIP13.53□□□□□ -0.24
NEK4-201ENST00000233027 PTPN1P18031 435 aaKnown RBP13.53□□□□□ -0.24
NEK4-201ENST00000233027 C4BPBP20851 252 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 NOS2P35228 1153 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 MSX2P35548 267 aaPredicted RBP13.53□□□□□ -0.24
NEK4-201ENST00000233027 GTF2BQ00403 316 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 PLD1Q13393 1074 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 RAP1GAP2Q684P5 730 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 IRF2BP2Q7Z5L9 587 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 CAPSLQ8WWF8 208 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 COPS5Q92905 334 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 USP7Q93009 1102 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 TEKT5Q96M29 485 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 ELOVL4Q9GZR5 314 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 CAB39LQ9H9S4 337 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms